Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.73□□□□□ -1.97
PMS2P54278 MCFD2P1-201ENST00000417812 300 ntBASIC2.73□□□□□ -1.97
PMS2P54278 MICF-203ENST00000432679 129 ntBASIC2.73□□□□□ -1.97
PMS2P54278 AC004383.1-201ENST00000438135 289 ntBASIC2.73□□□□□ -1.97
PMS2P54278 AL109933.2-201ENST00000452651 260 ntBASIC2.73□□□□□ -1.97
PMS2P54278 AP001324.2-201ENST00000461163 319 ntBASIC2.73□□□□□ -1.97
PMS2P54278 RPL17P19-201ENST00000489069 552 ntBASIC2.73□□□□□ -1.97
PMS2P54278 RNU6-327P-201ENST00000516270 127 ntBASIC2.73□□□□□ -1.97
PMS2P54278 RNU6-699P-201ENST00000517081 110 ntBASIC2.73□□□□□ -1.97
PMS2P54278 RNU6-264P-201ENST00000517134 104 ntBASIC2.73□□□□□ -1.97
PMS2P54278 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PMS2P54278 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.73□□□□□ -1.97
PMS2P54278 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.73□□□□□ -1.97
PMS2P54278 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
PMS2P54278 AP001836.1-201ENST00000604675 523 ntBASIC2.73□□□□□ -1.97
PMS2P54278 AL360085.1-201ENST00000604713 532 ntBASIC2.73□□□□□ -1.97
PMS2P54278 AC016925.2-201ENST00000605108 242 ntBASIC2.73□□□□□ -1.97
PMS2P54278 AC005014.2-201ENST00000607795 599 ntBASIC2.73□□□□□ -1.97
PMS2P54278 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
PMS2P54278 AC135776.4-201ENST00000624300 1904 ntBASIC2.73□□□□□ -1.97
PMS2P54278 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.73□□□□□ -1.97
PMS2P54278 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PMS2P54278 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PMS2P54278 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.72□□□□□ -1.97
PMS2P54278 SNORD50.1-201ENST00000362987 71 ntBASIC2.72□□□□□ -1.97
PMS2P54278 Y_RNA.148-201ENST00000363557 117 ntBASIC2.72□□□□□ -1.97
PMS2P54278 RNU6-461P-201ENST00000364195 107 ntBASIC2.72□□□□□ -1.97
PMS2P54278 SNORA18.3-201ENST00000384122 132 ntBASIC2.72□□□□□ -1.97
PMS2P54278 Y_RNA.496-201ENST00000384444 101 ntBASIC2.72□□□□□ -1.97
PMS2P54278 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.72□□□□□ -1.97
PMS2P54278 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.72□□□□□ -1.97
PMS2P54278 AC074117.2-201ENST00000417130 397 ntBASIC2.72□□□□□ -1.97
PMS2P54278 AC008267.5-201ENST00000424928 265 ntBASIC2.72□□□□□ -1.97
PMS2P54278 AC087499.2-201ENST00000432861 149 ntBASIC2.72□□□□□ -1.97
PMS2P54278 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PMS2P54278 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.72□□□□□ -1.97
PMS2P54278 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.72□□□□□ -1.97
PMS2P54278 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PMS2P54278 RNA5SP112-201ENST00000515937 99 ntBASIC2.72□□□□□ -1.97
PMS2P54278 CBX3P8-201ENST00000532412 525 ntBASIC2.72□□□□□ -1.97
PMS2P54278 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.72□□□□□ -1.97
PMS2P54278 MIR5701-3-201ENST00000578890 82 ntBASIC2.72□□□□□ -1.97
PMS2P54278 MIR3945-201ENST00000581853 98 ntBASIC2.72□□□□□ -1.97
PMS2P54278 MIR4435-1-201ENST00000582552 80 ntBASIC2.72□□□□□ -1.97
PMS2P54278 MIR5194-201ENST00000582634 120 ntBASIC2.72□□□□□ -1.97
PMS2P54278 MIR5701-1-201ENST00000585138 82 ntBASIC2.72□□□□□ -1.97
PMS2P54278 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.72□□□□□ -1.97
PMS2P54278 AL356157.2-201ENST00000605122 111 ntBASIC2.72□□□□□ -1.97
PMS2P54278 AC096772.1-201ENST00000609146 564 ntBASIC2.72□□□□□ -1.97
PMS2P54278 MIR5701-2-201ENST00000615634 82 ntBASIC2.72□□□□□ -1.97
PMS2P54278 IGHVIII-44-202ENST00000636235 289 ntBASIC2.72□□□□□ -1.97
PMS2P54278 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.72□□□□□ -1.97
PMS2P54278 ZNF271P-202ENST00000465539 1970 ntBASIC2.72□□□□□ -1.97
PMS2P54278 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.72□□□□□ -1.97
PMS2P54278 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PMS2P54278 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.71□□□□□ -1.97
PMS2P54278 ZNF299P-201ENST00000406845 1804 ntBASIC2.71□□□□□ -1.98
PMS2P54278 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PMS2P54278 RNU4-82P-201ENST00000362443 140 ntBASIC2.71□□□□□ -1.98
PMS2P54278 RNU6-486P-201ENST00000363116 107 ntBASIC2.71□□□□□ -1.98
PMS2P54278 RNU6-595P-201ENST00000363944 107 ntBASIC2.71□□□□□ -1.98
PMS2P54278 RNU6-639P-201ENST00000384074 107 ntBASIC2.71□□□□□ -1.98
PMS2P54278 RNY1P14-201ENST00000384426 108 ntBASIC2.71□□□□□ -1.98
PMS2P54278 RNU6-843P-201ENST00000384454 104 ntBASIC2.71□□□□□ -1.98
PMS2P54278 Y_RNA.577-201ENST00000384794 101 ntBASIC2.71□□□□□ -1.98
PMS2P54278 MIR521-1-201ENST00000384902 87 ntBASIC2.71□□□□□ -1.98
PMS2P54278 RNU6-308P-201ENST00000390957 107 ntBASIC2.71□□□□□ -1.98
PMS2P54278 RNA5SP181-201ENST00000410246 98 ntBASIC2.71□□□□□ -1.98
PMS2P54278 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.71□□□□□ -1.98
PMS2P54278 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.71□□□□□ -1.98
PMS2P54278 MTND2P23-201ENST00000422990 651 ntBASIC2.71□□□□□ -1.98
PMS2P54278 Z98742.2-201ENST00000431564 187 ntBASIC2.71□□□□□ -1.98
PMS2P54278 AL591043.1-201ENST00000432461 424 ntBASIC2.71□□□□□ -1.98
PMS2P54278 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.71□□□□□ -1.98
PMS2P54278 AC099799.1-201ENST00000439809 192 ntBASIC2.71□□□□□ -1.98
PMS2P54278 AC243964.1-201ENST00000441814 261 ntBASIC2.71□□□□□ -1.98
PMS2P54278 AC007969.2-201ENST00000441891 191 ntBASIC2.71□□□□□ -1.98
PMS2P54278 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.71□□□□□ -1.98
PMS2P54278 AC124916.1-201ENST00000444020 547 ntBASIC2.71□□□□□ -1.98
PMS2P54278 AC079354.2-201ENST00000453523 154 ntBASIC2.71□□□□□ -1.98
PMS2P54278 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.71□□□□□ -1.98
PMS2P54278 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.71□□□□□ -1.98
PMS2P54278 SNORA25.10-201ENST00000515926 124 ntBASIC2.71□□□□□ -1.98
PMS2P54278 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.71□□□□□ -1.98
PMS2P54278 AC090616.3-201ENST00000582184 217 ntBASIC2.71□□□□□ -1.98
PMS2P54278 AC009318.2-201ENST00000610917 651 ntBASIC2.71□□□□□ -1.98
PMS2P54278 AC040896.1-201ENST00000613819 479 ntBASIC2.71□□□□□ -1.98
PMS2P54278 AC083806.3-201ENST00000614016 455 ntBASIC2.71□□□□□ -1.98
PMS2P54278 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
PMS2P54278 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.7□□□□□ -1.98
PMS2P54278 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PMS2P54278 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.7□□□□□ -1.98
PMS2P54278 RNY1P16-201ENST00000363063 111 ntBASIC2.7□□□□□ -1.98
PMS2P54278 RNU6-527P-201ENST00000363425 104 ntBASIC2.7□□□□□ -1.98
PMS2P54278 Y_RNA.145-201ENST00000363527 102 ntBASIC2.7□□□□□ -1.98
PMS2P54278 Y_RNA.158-201ENST00000363651 101 ntBASIC2.7□□□□□ -1.98
PMS2P54278 RNU6-487P-201ENST00000365430 104 ntBASIC2.7□□□□□ -1.98
PMS2P54278 Y_RNA.428-201ENST00000384078 102 ntBASIC2.7□□□□□ -1.98
PMS2P54278 SNORD116-20-201ENST00000384529 92 ntBASIC2.7□□□□□ -1.98
PMS2P54278 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms