Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PDX1P52945 Y_RNA.504-201ENST00000384481 104 ntBASIC2.26□□□□□ -2.05
PDX1P52945 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
PDX1P52945 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
PDX1P52945 SNORA26.3-201ENST00000391119 136 ntBASIC2.26□□□□□ -2.05
PDX1P52945 CBX3P9-201ENST00000402326 552 ntBASIC2.26□□□□□ -2.05
PDX1P52945 RN7SKP158-201ENST00000410453 326 ntBASIC2.26□□□□□ -2.05
PDX1P52945 RNU4-14P-201ENST00000410858 122 ntBASIC2.26□□□□□ -2.05
PDX1P52945 DAP3P1-201ENST00000441522 278 ntBASIC2.26□□□□□ -2.05
PDX1P52945 AL353572.1-201ENST00000442490 417 ntBASIC2.26□□□□□ -2.05
PDX1P52945 MTND4P18-201ENST00000447010 465 ntBASIC2.26□□□□□ -2.05
PDX1P52945 RNU7-26P-201ENST00000458980 63 ntBASIC2.26□□□□□ -2.05
PDX1P52945 RPPH1-2P-201ENST00000516688 293 ntBASIC2.26□□□□□ -2.05
PDX1P52945 SNORA31.15-201ENST00000516771 132 ntBASIC2.26□□□□□ -2.05
PDX1P52945 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.26□□□□□ -2.05
PDX1P52945 MIR5571-201ENST00000577998 113 ntBASIC2.26□□□□□ -2.05
PDX1P52945 UBE2V2P2-201ENST00000587677 504 ntBASIC2.26□□□□□ -2.05
PDX1P52945 AL078605.1-201ENST00000603529 500 ntBASIC2.26□□□□□ -2.05
PDX1P52945 AL049779.4-201ENST00000604500 156 ntBASIC2.26□□□□□ -2.05
PDX1P52945 AL034555.1-201ENST00000604816 211 ntBASIC2.26□□□□□ -2.05
PDX1P52945 AC124303.1-201ENST00000605703 360 ntBASIC2.26□□□□□ -2.05
PDX1P52945 AC009994.1-201ENST00000606889 253 ntBASIC2.26□□□□□ -2.05
PDX1P52945 MIR8076-201ENST00000611401 83 ntBASIC2.26□□□□□ -2.05
PDX1P52945 HMGB1P24-202ENST00000615653 685 ntBASIC2.26□□□□□ -2.05
PDX1P52945 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.26□□□□□ -2.05
PDX1P52945 ZNF271P-202ENST00000465539 1970 ntBASIC2.26□□□□□ -2.05
PDX1P52945 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
PDX1P52945 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PDX1P52945 SNORD114-1-201ENST00000362705 72 ntBASIC2.25□□□□□ -2.05
PDX1P52945 RNU6-1274P-201ENST00000384557 107 ntBASIC2.25□□□□□ -2.05
PDX1P52945 SNORA41-201ENST00000384675 132 ntBASIC2.25□□□□□ -2.05
PDX1P52945 BTF3L4P2-201ENST00000392798 346 ntBASIC2.25□□□□□ -2.05
PDX1P52945 AL591034.2-201ENST00000402839 359 ntBASIC2.25□□□□□ -2.05
PDX1P52945 RNA5SP181-201ENST00000410246 98 ntBASIC2.25□□□□□ -2.05
PDX1P52945 RNU2-25P-201ENST00000411041 191 ntBASIC2.25□□□□□ -2.05
PDX1P52945 AL590135.1-201ENST00000422215 156 ntBASIC2.25□□□□□ -2.05
PDX1P52945 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.25□□□□□ -2.05
PDX1P52945 AC019205.3-201ENST00000424573 156 ntBASIC2.25□□□□□ -2.05
PDX1P52945 USP9YP30-201ENST00000430729 455 ntBASIC2.25□□□□□ -2.05
PDX1P52945 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.25□□□□□ -2.05
PDX1P52945 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.25□□□□□ -2.05
PDX1P52945 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.25□□□□□ -2.05
PDX1P52945 AC016700.2-201ENST00000446011 156 ntBASIC2.25□□□□□ -2.05
PDX1P52945 IFNA11P-201ENST00000446352 526 ntBASIC2.25□□□□□ -2.05
PDX1P52945 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.25□□□□□ -2.05
PDX1P52945 AC015911.1-201ENST00000495111 156 ntBASIC2.25□□□□□ -2.05
PDX1P52945 HMGB1P35-201ENST00000503360 598 ntBASIC2.25□□□□□ -2.05
PDX1P52945 AC116337.1-201ENST00000509680 687 ntBASIC2.25□□□□□ -2.05
PDX1P52945 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.25□□□□□ -2.05
PDX1P52945 RNU6-875P-201ENST00000516488 106 ntBASIC2.25□□□□□ -2.05
PDX1P52945 Y_RNA.702-201ENST00000516843 96 ntBASIC2.25□□□□□ -2.05
PDX1P52945 AC105029.1-201ENST00000520250 669 ntBASIC2.25□□□□□ -2.05
PDX1P52945 MRPS36P4-201ENST00000534436 298 ntBASIC2.25□□□□□ -2.05
PDX1P52945 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.25□□□□□ -2.05
PDX1P52945 IMMP1LP2-201ENST00000552954 492 ntBASIC2.25□□□□□ -2.05
PDX1P52945 AC023824.2-201ENST00000566185 400 ntBASIC2.25□□□□□ -2.05
PDX1P52945 POLR3GP2-201ENST00000588366 668 ntBASIC2.25□□□□□ -2.05
PDX1P52945 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.25□□□□□ -2.05
PDX1P52945 AL138963.2-201ENST00000605137 226 ntBASIC2.25□□□□□ -2.05
PDX1P52945 AC019193.3-201ENST00000609144 554 ntBASIC2.25□□□□□ -2.05
PDX1P52945 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.25□□□□□ -2.05
PDX1P52945 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.25□□□□□ -2.05
PDX1P52945 AC090517.3-201ENST00000625170 141 ntBASIC2.25□□□□□ -2.05
PDX1P52945 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
PDX1P52945 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
PDX1P52945 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PDX1P52945 MIR21-201ENST00000362134 72 ntBASIC2.24□□□□□ -2.05
PDX1P52945 SNORD50.1-201ENST00000362987 71 ntBASIC2.24□□□□□ -2.05
PDX1P52945 RNU1-138P-201ENST00000384093 164 ntBASIC2.24□□□□□ -2.05
PDX1P52945 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.24□□□□□ -2.05
PDX1P52945 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.24□□□□□ -2.05
PDX1P52945 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.24□□□□□ -2.05
PDX1P52945 MTND5P20-201ENST00000448677 143 ntBASIC2.24□□□□□ -2.05
PDX1P52945 AC107399.1-201ENST00000451226 265 ntBASIC2.24□□□□□ -2.05
PDX1P52945 AC079354.2-201ENST00000453523 154 ntBASIC2.24□□□□□ -2.05
PDX1P52945 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.24□□□□□ -2.05
PDX1P52945 AC016632.1-201ENST00000503994 196 ntBASIC2.24□□□□□ -2.05
PDX1P52945 RNU6-1016P-201ENST00000516689 94 ntBASIC2.24□□□□□ -2.05
PDX1P52945 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.24□□□□□ -2.05
PDX1P52945 AC115990.1-201ENST00000526957 301 ntBASIC2.24□□□□□ -2.05
PDX1P52945 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.24□□□□□ -2.05
PDX1P52945 MIR4658-201ENST00000584344 65 ntBASIC2.24□□□□□ -2.05
PDX1P52945 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.24□□□□□ -2.05
PDX1P52945 AP000560.1-201ENST00000624150 1937 ntBASIC2.24□□□□□ -2.05
PDX1P52945 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
PDX1P52945 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.23□□□□□ -2.05
PDX1P52945 Y_RNA.70-201ENST00000362886 110 ntBASIC2.23□□□□□ -2.05
PDX1P52945 RNU1-23P-201ENST00000363361 144 ntBASIC2.23□□□□□ -2.05
PDX1P52945 RNA5SP393-201ENST00000363423 117 ntBASIC2.23□□□□□ -2.05
PDX1P52945 RNU1-51P-201ENST00000365345 176 ntBASIC2.23□□□□□ -2.05
PDX1P52945 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.23□□□□□ -2.05
PDX1P52945 RNU6-842P-201ENST00000384269 107 ntBASIC2.23□□□□□ -2.05
PDX1P52945 Y_RNA.474-201ENST00000384341 102 ntBASIC2.23□□□□□ -2.05
PDX1P52945 AC074085.1-201ENST00000413598 418 ntBASIC2.23□□□□□ -2.05
PDX1P52945 AL591806.2-201ENST00000433122 173 ntBASIC2.23□□□□□ -2.05
PDX1P52945 AC018634.1-201ENST00000437554 401 ntBASIC2.23□□□□□ -2.05
PDX1P52945 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.23□□□□□ -2.05
PDX1P52945 GPM6BP3-201ENST00000442797 145 ntBASIC2.23□□□□□ -2.05
PDX1P52945 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.23□□□□□ -2.05
PDX1P52945 FO393415.2-201ENST00000480085 343 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms