Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CLCN3P51790 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CLCN3P51790 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.6□□□□□ -1.99
CLCN3P51790 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLCN3P51790 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
CLCN3P51790 MIR369-201ENST00000362155 70 ntBASIC2.6□□□□□ -1.99
CLCN3P51790 Y_RNA.5-201ENST00000362334 102 ntBASIC2.6□□□□□ -1.99
CLCN3P51790 RNU6-306P-201ENST00000384617 107 ntBASIC2.6□□□□□ -1.99
CLCN3P51790 MIR517A-201ENST00000385001 87 ntBASIC2.6□□□□□ -1.99
CLCN3P51790 SNORA75.6-201ENST00000391318 127 ntBASIC2.6□□□□□ -1.99
CLCN3P51790 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLCN3P51790 RNU6-174P-201ENST00000410406 106 ntBASIC2.6□□□□□ -1.99
CLCN3P51790 RNU6-293P-201ENST00000411259 106 ntBASIC2.6□□□□□ -1.99
CLCN3P51790 PMCHL1-202ENST00000423102 261 ntBASIC2.6□□□□□ -1.99
CLCN3P51790 AC092427.1-202ENST00000430569 476 ntBASIC2.6□□□□□ -1.99
CLCN3P51790 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLCN3P51790 Y_RNA.631-201ENST00000459607 101 ntBASIC2.6□□□□□ -1.99
CLCN3P51790 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.6□□□□□ -1.99
CLCN3P51790 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.6□□□□□ -1.99
CLCN3P51790 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.6□□□□□ -1.99
CLCN3P51790 AC004486.1-201ENST00000546846 233 ntBASIC2.6□□□□□ -1.99
CLCN3P51790 MIR3171-201ENST00000584270 74 ntBASIC2.6□□□□□ -1.99
CLCN3P51790 AC005034.5-201ENST00000604219 466 ntBASIC2.6□□□□□ -1.99
CLCN3P51790 AC009229.3-201ENST00000608056 282 ntBASIC2.6□□□□□ -1.99
CLCN3P51790 AL449363.1-201ENST00000617815 186 ntBASIC2.6□□□□□ -1.99
CLCN3P51790 AL159153.1-201ENST00000619688 317 ntBASIC2.6□□□□□ -1.99
CLCN3P51790 MTND4P27-201ENST00000450813 1354 ntBASIC2.6□□□□□ -1.99
CLCN3P51790 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.59□□□□□ -1.99
CLCN3P51790 MTND5P10-201ENST00000603719 1809 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLCN3P51790 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CLCN3P51790 RNU6-529P-201ENST00000363383 104 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 SNORA63-201ENST00000363450 132 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 RNU6-1059P-201ENST00000363752 98 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 RNU6-1040P-201ENST00000383974 107 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 Y_RNA.473-201ENST00000384333 102 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 RNU1-57P-201ENST00000384491 166 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 MIR559-201ENST00000385188 96 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 FO393413.1-201ENST00000402892 195 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 RNU6-325P-201ENST00000411132 105 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 AC138623.1-201ENST00000418060 216 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 AC243428.1-201ENST00000421099 264 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 AC018865.2-201ENST00000423631 129 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 DAP3P1-201ENST00000441522 278 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 FTH1P25-201ENST00000447665 469 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 AC112771.1-201ENST00000463581 102 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 RPL7P42-201ENST00000481005 679 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 AC114801.2-201ENST00000503825 781 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 RNU1-54P-201ENST00000517181 120 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 AC115990.1-201ENST00000526957 301 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.59□□□□□ -1.99
CLCN3P51790 MIR3670-2-201ENST00000582974 65 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 MIR3670-1-201ENST00000584160 65 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 MIR3670-3-201ENST00000584855 65 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 AC073410.2-201ENST00000603240 332 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 AL356280.1-201ENST00000603614 379 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CLCN3P51790 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.59□□□□□ -1.99
CLCN3P51790 AC067747.1-201ENST00000608026 250 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 AC069294.1-201ENST00000608397 350 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 MIR3670-4-201ENST00000612260 65 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 AC091925.1-201ENST00000623204 462 ntBASIC2.59□□□□□ -1.99
CLCN3P51790 MTND5P6-201ENST00000422338 1798 ntBASIC2.59□□□□□ -2
CLCN3P51790 Y_RNA.31-201ENST00000362574 102 ntBASIC2.58□□□□□ -2
CLCN3P51790 Y_RNA.146-201ENST00000363549 102 ntBASIC2.58□□□□□ -2
CLCN3P51790 RNU6-1180P-201ENST00000364935 107 ntBASIC2.58□□□□□ -2
CLCN3P51790 RNU6-890P-201ENST00000384121 107 ntBASIC2.58□□□□□ -2
CLCN3P51790 AL133475.1-201ENST00000404414 305 ntBASIC2.58□□□□□ -2
CLCN3P51790 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.58□□□□□ -2
CLCN3P51790 RN7SKP223-201ENST00000410582 62 ntBASIC2.58□□□□□ -2
CLCN3P51790 RNU2-25P-201ENST00000411041 191 ntBASIC2.58□□□□□ -2
CLCN3P51790 AP000275.1-201ENST00000411943 390 ntBASIC2.58□□□□□ -2
CLCN3P51790 AC007064.1-201ENST00000412238 351 ntBASIC2.58□□□□□ -2
CLCN3P51790 RPL30P4-201ENST00000429309 333 ntBASIC2.58□□□□□ -2
CLCN3P51790 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.58□□□□□ -2
CLCN3P51790 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.58□□□□□ -2
CLCN3P51790 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.58□□□□□ -2
CLCN3P51790 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.58□□□□□ -2
CLCN3P51790 AP000705.1-201ENST00000454567 350 ntBASIC2.58□□□□□ -2
CLCN3P51790 U8.21-201ENST00000459536 136 ntBASIC2.58□□□□□ -2
CLCN3P51790 RPL23AP70-201ENST00000483361 460 ntBASIC2.58□□□□□ -2
CLCN3P51790 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.58□□□□□ -2
CLCN3P51790 RNA5SP384-201ENST00000516615 116 ntBASIC2.58□□□□□ -2
CLCN3P51790 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.58□□□□□ -2
CLCN3P51790 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.58□□□□□ -2
CLCN3P51790 AC105245.1-201ENST00000581934 244 ntBASIC2.58□□□□□ -2
CLCN3P51790 MIR3199-1-201ENST00000582434 88 ntBASIC2.58□□□□□ -2
CLCN3P51790 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.58□□□□□ -2
CLCN3P51790 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.58□□□□□ -2
CLCN3P51790 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
CLCN3P51790 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CLCN3P51790 Y_RNA.216-201ENST00000364205 93 ntBASIC2.57□□□□□ -2
CLCN3P51790 SNORD56.5-201ENST00000364281 72 ntBASIC2.57□□□□□ -2
CLCN3P51790 RNU6-1141P-201ENST00000364520 107 ntBASIC2.57□□□□□ -2
CLCN3P51790 U8.8-201ENST00000365399 135 ntBASIC2.57□□□□□ -2
CLCN3P51790 AL139095.1-201ENST00000404326 391 ntBASIC2.57□□□□□ -2
CLCN3P51790 RNA5SP425-201ENST00000410336 112 ntBASIC2.57□□□□□ -2
CLCN3P51790 EIF4EP4-201ENST00000424916 578 ntBASIC2.57□□□□□ -2
CLCN3P51790 USMG5P1-201ENST00000425964 177 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms