Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
TM4SF4P48230 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
TM4SF4P48230 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TM4SF4P48230 RNU6-1159P-201ENST00000362933 107 ntBASIC2.93□□□□□ -1.94
TM4SF4P48230 RNU5E-4P-201ENST00000364931 120 ntBASIC2.93□□□□□ -1.94
TM4SF4P48230 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
TM4SF4P48230 SNORA26.3-201ENST00000391119 136 ntBASIC2.93□□□□□ -1.94
TM4SF4P48230 RNA5SP494-201ENST00000410653 129 ntBASIC2.93□□□□□ -1.94
TM4SF4P48230 AC022028.1-201ENST00000412054 408 ntBASIC2.93□□□□□ -1.94
TM4SF4P48230 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.93□□□□□ -1.94
TM4SF4P48230 AC011816.1-201ENST00000441346 546 ntBASIC2.93□□□□□ -1.94
TM4SF4P48230 SNORD5.1-201ENST00000458800 75 ntBASIC2.93□□□□□ -1.94
TM4SF4P48230 RNU7-26P-201ENST00000458980 63 ntBASIC2.93□□□□□ -1.94
TM4SF4P48230 AC090515.1-201ENST00000465295 476 ntBASIC2.93□□□□□ -1.94
TM4SF4P48230 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.93□□□□□ -1.94
TM4SF4P48230 RNU6-559P-201ENST00000516151 98 ntBASIC2.93□□□□□ -1.94
TM4SF4P48230 SNORA31.16-201ENST00000516773 139 ntBASIC2.93□□□□□ -1.94
TM4SF4P48230 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.93□□□□□ -1.94
TM4SF4P48230 AL713866.2-201ENST00000603579 219 ntBASIC2.93□□□□□ -1.94
TM4SF4P48230 HMGB1P24-202ENST00000615653 685 ntBASIC2.93□□□□□ -1.94
TM4SF4P48230 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.92□□□□□ -1.94
TM4SF4P48230 AC135776.4-201ENST00000624300 1904 ntBASIC2.92□□□□□ -1.94
TM4SF4P48230 RNU6-596P-201ENST00000365395 98 ntBASIC2.92□□□□□ -1.94
TM4SF4P48230 RNU6-1297P-201ENST00000384415 104 ntBASIC2.92□□□□□ -1.94
TM4SF4P48230 RNU6-1050P-201ENST00000410388 107 ntBASIC2.92□□□□□ -1.94
TM4SF4P48230 RNU6-370P-201ENST00000411008 104 ntBASIC2.92□□□□□ -1.94
TM4SF4P48230 RPL23AP50-201ENST00000434149 455 ntBASIC2.92□□□□□ -1.94
TM4SF4P48230 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TM4SF4P48230 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.92□□□□□ -1.94
TM4SF4P48230 AC096638.1-201ENST00000444678 216 ntBASIC2.92□□□□□ -1.94
TM4SF4P48230 HMGN2P23-201ENST00000456759 269 ntBASIC2.92□□□□□ -1.94
TM4SF4P48230 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.92□□□□□ -1.94
TM4SF4P48230 CYP4A27P-201ENST00000567218 190 ntBASIC2.92□□□□□ -1.94
TM4SF4P48230 MIR5690-201ENST00000583739 73 ntBASIC2.92□□□□□ -1.94
TM4SF4P48230 MIR4635-201ENST00000583759 79 ntBASIC2.92□□□□□ -1.94
TM4SF4P48230 AC005899.2-201ENST00000584353 90 ntBASIC2.92□□□□□ -1.94
TM4SF4P48230 Z98751.3-201ENST00000604447 521 ntBASIC2.92□□□□□ -1.94
TM4SF4P48230 AC016727.1-205ENST00000605437 569 ntBASIC2.92□□□□□ -1.94
TM4SF4P48230 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.92□□□□□ -1.94
TM4SF4P48230 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TM4SF4P48230 Y_RNA.387-201ENST00000383918 102 ntBASIC2.91□□□□□ -1.94
TM4SF4P48230 Y_RNA.594-201ENST00000410373 140 ntBASIC2.91□□□□□ -1.94
TM4SF4P48230 AC012306.1-201ENST00000423267 114 ntBASIC2.91□□□□□ -1.94
TM4SF4P48230 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.91□□□□□ -1.94
TM4SF4P48230 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.91□□□□□ -1.94
TM4SF4P48230 AC234781.5-201ENST00000508429 271 ntBASIC2.91□□□□□ -1.94
TM4SF4P48230 MTND3P22-201ENST00000510932 243 ntBASIC2.91□□□□□ -1.94
TM4SF4P48230 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.91□□□□□ -1.94
TM4SF4P48230 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.91□□□□□ -1.94
TM4SF4P48230 AL132765.2-201ENST00000610812 351 ntBASIC2.91□□□□□ -1.94
TM4SF4P48230 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.91□□□□□ -1.94
TM4SF4P48230 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.91□□□□□ -1.94
TM4SF4P48230 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
TM4SF4P48230 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TM4SF4P48230 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
TM4SF4P48230 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.91□□□□□ -1.94
TM4SF4P48230 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
TM4SF4P48230 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.9□□□□□ -1.94
TM4SF4P48230 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TM4SF4P48230 RNU1-72P-201ENST00000362976 153 ntBASIC2.9□□□□□ -1.95
TM4SF4P48230 RNA5SP125-201ENST00000364843 120 ntBASIC2.9□□□□□ -1.95
TM4SF4P48230 RNU6-1032P-201ENST00000384100 107 ntBASIC2.9□□□□□ -1.95
TM4SF4P48230 MIR208B-201ENST00000401172 77 ntBASIC2.9□□□□□ -1.95
TM4SF4P48230 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.9□□□□□ -1.95
TM4SF4P48230 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.9□□□□□ -1.95
TM4SF4P48230 RN7SL442P-201ENST00000473804 320 ntBASIC2.9□□□□□ -1.95
TM4SF4P48230 AC145146.1-201ENST00000496370 254 ntBASIC2.9□□□□□ -1.95
TM4SF4P48230 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.9□□□□□ -1.95
TM4SF4P48230 AC026782.1-201ENST00000512952 449 ntBASIC2.9□□□□□ -1.95
TM4SF4P48230 SNORA48.11-201ENST00000517015 89 ntBASIC2.9□□□□□ -1.95
TM4SF4P48230 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.9□□□□□ -1.95
TM4SF4P48230 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.9□□□□□ -1.95
TM4SF4P48230 AC009229.3-201ENST00000608056 282 ntBASIC2.9□□□□□ -1.95
TM4SF4P48230 AC009318.2-201ENST00000610917 651 ntBASIC2.9□□□□□ -1.95
TM4SF4P48230 U4atac.1-201ENST00000618345 95 ntBASIC2.9□□□□□ -1.95
TM4SF4P48230 SNORA43.4-201ENST00000629559 138 ntBASIC2.9□□□□□ -1.95
TM4SF4P48230 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
TM4SF4P48230 KPNA2P1-201ENST00000458289 1591 ntBASIC2.9□□□□□ -1.95
TM4SF4P48230 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.9□□□□□ -1.95
TM4SF4P48230 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TM4SF4P48230 Y_RNA.259-201ENST00000364619 101 ntBASIC2.89□□□□□ -1.95
TM4SF4P48230 RNU4-9P-201ENST00000364951 139 ntBASIC2.89□□□□□ -1.95
TM4SF4P48230 SNORA29-201ENST00000384183 140 ntBASIC2.89□□□□□ -1.95
TM4SF4P48230 MIR561-201ENST00000385216 97 ntBASIC2.89□□□□□ -1.95
TM4SF4P48230 MTCO2P27-201ENST00000420740 428 ntBASIC2.89□□□□□ -1.95
TM4SF4P48230 USMG5P1-201ENST00000425964 177 ntBASIC2.89□□□□□ -1.95
TM4SF4P48230 AL353752.1-201ENST00000454946 260 ntBASIC2.89□□□□□ -1.95
TM4SF4P48230 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.89□□□□□ -1.95
TM4SF4P48230 AC021146.2-201ENST00000504736 556 ntBASIC2.89□□□□□ -1.95
TM4SF4P48230 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.89□□□□□ -1.95
TM4SF4P48230 AC011494.1-201ENST00000596454 237 ntBASIC2.89□□□□□ -1.95
TM4SF4P48230 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.89□□□□□ -1.95
TM4SF4P48230 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
TM4SF4P48230 ZNF299P-201ENST00000406845 1804 ntBASIC2.89□□□□□ -1.95
TM4SF4P48230 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.88□□□□□ -1.95
TM4SF4P48230 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
TM4SF4P48230 VTRNA1-1-201ENST00000363120 99 ntBASIC2.88□□□□□ -1.95
TM4SF4P48230 RNU6-1059P-201ENST00000363752 98 ntBASIC2.88□□□□□ -1.95
TM4SF4P48230 MIR181A2-201ENST00000384863 110 ntBASIC2.88□□□□□ -1.95
TM4SF4P48230 SNORA75.4-201ENST00000391278 119 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms