Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MTND4P14-201ENST00000435799 1354 ntBASIC1.33□□□□□ -2.2
SLC1A1P43005 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SLC1A1P43005 RNU6-552P-201ENST00000362869 119 ntBASIC1.32□□□□□ -2.2
SLC1A1P43005 RNU6-181P-201ENST00000363225 107 ntBASIC1.32□□□□□ -2.2
SLC1A1P43005 Y_RNA.140-201ENST00000363474 103 ntBASIC1.32□□□□□ -2.2
SLC1A1P43005 RNU6-296P-201ENST00000384608 107 ntBASIC1.32□□□□□ -2.2
SLC1A1P43005 RNA5SP213-201ENST00000391031 106 ntBASIC1.32□□□□□ -2.2
SLC1A1P43005 MTCO2P34-201ENST00000421994 607 ntBASIC1.32□□□□□ -2.2
SLC1A1P43005 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.32□□□□□ -2.2
SLC1A1P43005 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.32□□□□□ -2.2
SLC1A1P43005 MTCO1P44-201ENST00000441935 243 ntBASIC1.32□□□□□ -2.2
SLC1A1P43005 RPS27AP8-201ENST00000452665 445 ntBASIC1.32□□□□□ -2.2
SLC1A1P43005 TOMM22P6-201ENST00000465035 409 ntBASIC1.32□□□□□ -2.2
SLC1A1P43005 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
SLC1A1P43005 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.32□□□□□ -2.2
SLC1A1P43005 AC016632.1-201ENST00000503994 196 ntBASIC1.32□□□□□ -2.2
SLC1A1P43005 RNU6-1098P-201ENST00000516772 96 ntBASIC1.32□□□□□ -2.2
SLC1A1P43005 RNU6-445P-201ENST00000516949 107 ntBASIC1.32□□□□□ -2.2
SLC1A1P43005 RNU1-92P-201ENST00000517017 135 ntBASIC1.32□□□□□ -2.2
SLC1A1P43005 AP002963.1-201ENST00000530590 184 ntBASIC1.32□□□□□ -2.2
SLC1A1P43005 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.32□□□□□ -2.2
SLC1A1P43005 AP003034.1-201ENST00000534621 422 ntBASIC1.32□□□□□ -2.2
SLC1A1P43005 AC012414.6-201ENST00000568241 401 ntBASIC1.32□□□□□ -2.2
SLC1A1P43005 AC136475.10-201ENST00000620253 385 ntBASIC1.32□□□□□ -2.2
SLC1A1P43005 AC009161.2-201ENST00000624626 138 ntBASIC1.32□□□□□ -2.2
SLC1A1P43005 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.32□□□□□ -2.2
SLC1A1P43005 AC068205.3-201ENST00000636385 468 ntBASIC1.32□□□□□ -2.2
SLC1A1P43005 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SLC1A1P43005 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SLC1A1P43005 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.32□□□□□ -2.2
SLC1A1P43005 AC091812.1-201ENST00000432235 1948 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 Y_RNA.67-201ENST00000362870 100 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 RNU6-414P-201ENST00000363705 104 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 RNU6-457P-201ENST00000363999 107 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 Y_RNA.201-201ENST00000364052 96 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 RNU6-378P-201ENST00000384324 107 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 Y_RNA.504-201ENST00000384481 104 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 RNU6-606P-201ENST00000384721 111 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 RNU2-9P-201ENST00000410194 145 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.31□□□□□ -2.2
SLC1A1P43005 PIGFP2-201ENST00000421400 651 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.31□□□□□ -2.2
SLC1A1P43005 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.31□□□□□ -2.2
SLC1A1P43005 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.31□□□□□ -2.2
SLC1A1P43005 RPL31P3-201ENST00000458430 332 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 RNA5SP269-201ENST00000459032 137 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 RNU7-14P-201ENST00000459331 62 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 GMFBP1-201ENST00000467831 427 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.31□□□□□ -2.2
SLC1A1P43005 AC079140.5-201ENST00000507882 310 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.31□□□□□ -2.2
SLC1A1P43005 RNU5F-4P-201ENST00000516581 114 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 MTCO3P23-201ENST00000561363 289 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.31□□□□□ -2.2
SLC1A1P43005 MIR4422-201ENST00000581938 83 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 MIR4769-201ENST00000584126 77 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 VN1R80P-201ENST00000597126 338 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 Z98751.3-201ENST00000604447 521 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 AP001485.1-201ENST00000604799 199 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SLC1A1P43005 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 AL450472.1-202ENST00000637286 180 ntBASIC1.31□□□□□ -2.2
SLC1A1P43005 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SLC1A1P43005 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
SLC1A1P43005 SNORA36A-201ENST00000384221 132 ntBASIC1.3□□□□□ -2.2
SLC1A1P43005 U8.10-201ENST00000384260 133 ntBASIC1.3□□□□□ -2.2
SLC1A1P43005 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
SLC1A1P43005 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
SLC1A1P43005 MIR1267-201ENST00000408723 78 ntBASIC1.3□□□□□ -2.2
SLC1A1P43005 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.3□□□□□ -2.2
SLC1A1P43005 UBE2V1P8-201ENST00000437166 265 ntBASIC1.3□□□□□ -2.2
SLC1A1P43005 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.3□□□□□ -2.2
SLC1A1P43005 RPL31P58-201ENST00000469001 379 ntBASIC1.3□□□□□ -2.2
SLC1A1P43005 HMGN1P13-201ENST00000505795 138 ntBASIC1.3□□□□□ -2.2
SLC1A1P43005 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.3□□□□□ -2.2
SLC1A1P43005 EIF4A1P12-201ENST00000551910 141 ntBASIC1.3□□□□□ -2.2
SLC1A1P43005 HMGB1P33-201ENST00000563485 527 ntBASIC1.3□□□□□ -2.2
SLC1A1P43005 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.3□□□□□ -2.2
SLC1A1P43005 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.3□□□□□ -2.2
SLC1A1P43005 CYP4A27P-201ENST00000567218 190 ntBASIC1.3□□□□□ -2.2
SLC1A1P43005 MIR3124-201ENST00000582636 67 ntBASIC1.3□□□□□ -2.2
SLC1A1P43005 AP001836.1-201ENST00000604675 523 ntBASIC1.3□□□□□ -2.2
SLC1A1P43005 AL512598.1-201ENST00000610158 273 ntBASIC1.3□□□□□ -2.2
SLC1A1P43005 AC083806.3-201ENST00000614016 455 ntBASIC1.3□□□□□ -2.2
SLC1A1P43005 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.29□□□□□ -2.2
SLC1A1P43005 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SLC1A1P43005 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
SLC1A1P43005 RNU4-91P-201ENST00000364778 135 ntBASIC1.29□□□□□ -2.2
SLC1A1P43005 SNORD31B-201ENST00000364977 69 ntBASIC1.29□□□□□ -2.2
SLC1A1P43005 RNU1-78P-201ENST00000391248 165 ntBASIC1.29□□□□□ -2.2
SLC1A1P43005 RNU2-29P-201ENST00000410423 189 ntBASIC1.29□□□□□ -2.2
SLC1A1P43005 RPL30P13-201ENST00000418873 348 ntBASIC1.29□□□□□ -2.2
SLC1A1P43005 AC002486.1-201ENST00000435098 391 ntBASIC1.29□□□□□ -2.2
SLC1A1P43005 AL445567.1-201ENST00000439121 144 ntBASIC1.29□□□□□ -2.2
SLC1A1P43005 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.29□□□□□ -2.2
SLC1A1P43005 AC007547.1-201ENST00000462177 490 ntBASIC1.29□□□□□ -2.2
SLC1A1P43005 RN7SKP179-201ENST00000516126 217 ntBASIC1.29□□□□□ -2.2
SLC1A1P43005 AC069113.1-201ENST00000517763 267 ntBASIC1.29□□□□□ -2.2
SLC1A1P43005 AC090821.2-201ENST00000523552 176 ntBASIC1.29□□□□□ -2.2
SLC1A1P43005 SUB1P2-201ENST00000556401 297 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms