Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AP001025.1-201ENST00000486139 332 ntBASIC2.31□□□□□ -2.04
HNF4AP41235 AC018868.1-201ENST00000491307 315 ntBASIC2.31□□□□□ -2.04
HNF4AP41235 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.31□□□□□ -2.04
HNF4AP41235 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.31□□□□□ -2.04
HNF4AP41235 AC096745.1-201ENST00000509945 370 ntBASIC2.31□□□□□ -2.04
HNF4AP41235 AC107222.1-201ENST00000510899 637 ntBASIC2.31□□□□□ -2.04
HNF4AP41235 AC021269.2-201ENST00000532318 330 ntBASIC2.31□□□□□ -2.04
HNF4AP41235 NDUFA5P6-201ENST00000542110 379 ntBASIC2.31□□□□□ -2.04
HNF4AP41235 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.31□□□□□ -2.04
HNF4AP41235 AC090517.3-201ENST00000625170 141 ntBASIC2.31□□□□□ -2.04
HNF4AP41235 AC243829.7-201ENST00000633081 225 ntBASIC2.31□□□□□ -2.04
HNF4AP41235 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.31□□□□□ -2.04
HNF4AP41235 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.3□□□□□ -2.04
HNF4AP41235 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HNF4AP41235 MIR21-201ENST00000362134 72 ntBASIC2.3□□□□□ -2.04
HNF4AP41235 Y_RNA.151-201ENST00000363566 112 ntBASIC2.3□□□□□ -2.04
HNF4AP41235 RNU6-1210P-201ENST00000363775 107 ntBASIC2.3□□□□□ -2.04
HNF4AP41235 Y_RNA.813-201ENST00000364639 102 ntBASIC2.3□□□□□ -2.04
HNF4AP41235 RNU6-827P-201ENST00000365553 106 ntBASIC2.3□□□□□ -2.04
HNF4AP41235 RPL37P10-201ENST00000412884 288 ntBASIC2.3□□□□□ -2.04
HNF4AP41235 UBE2V1P4-201ENST00000425374 344 ntBASIC2.3□□□□□ -2.04
HNF4AP41235 SNAP23P1-201ENST00000433229 246 ntBASIC2.3□□□□□ -2.04
HNF4AP41235 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.3□□□□□ -2.04
HNF4AP41235 AL031274.1-201ENST00000450334 232 ntBASIC2.3□□□□□ -2.04
HNF4AP41235 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.3□□□□□ -2.04
HNF4AP41235 Y_RNA.632-201ENST00000459189 102 ntBASIC2.3□□□□□ -2.04
HNF4AP41235 AL121594.1-201ENST00000475906 575 ntBASIC2.3□□□□□ -2.04
HNF4AP41235 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.3□□□□□ -2.04
HNF4AP41235 RPS27P21-201ENST00000486977 252 ntBASIC2.3□□□□□ -2.04
HNF4AP41235 AC026436.1-201ENST00000510537 270 ntBASIC2.3□□□□□ -2.04
HNF4AP41235 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.3□□□□□ -2.04
HNF4AP41235 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.3□□□□□ -2.04
HNF4AP41235 RNA5SP24-201ENST00000516478 95 ntBASIC2.3□□□□□ -2.04
HNF4AP41235 AC103996.1-201ENST00000555468 102 ntBASIC2.3□□□□□ -2.04
HNF4AP41235 AC233702.2-202ENST00000562547 291 ntBASIC2.3□□□□□ -2.04
HNF4AP41235 FRG2DP-202ENST00000566967 323 ntBASIC2.3□□□□□ -2.04
HNF4AP41235 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
HNF4AP41235 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HNF4AP41235 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.29□□□□□ -2.04
HNF4AP41235 RNU6-212P-201ENST00000362642 104 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 RNU6-428P-201ENST00000362942 107 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 Y_RNA.387-201ENST00000383918 102 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 Y_RNA.419-201ENST00000384041 102 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 AC074117.2-201ENST00000417130 397 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 AL117339.3-201ENST00000418733 162 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 AL139396.1-201ENST00000421137 167 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 AL645568.3-201ENST00000433683 316 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 UBE2V1P7-201ENST00000446395 340 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 AL513328.1-201ENST00000446460 224 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 UBE2DNL-203ENST00000474922 222 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.29□□□□□ -2.04
HNF4AP41235 RPL39P5-202ENST00000512505 151 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.29□□□□□ -2.04
HNF4AP41235 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.29□□□□□ -2.04
HNF4AP41235 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.29□□□□□ -2.04
HNF4AP41235 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.29□□□□□ -2.04
HNF4AP41235 MIR4672-201ENST00000583126 81 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.29□□□□□ -2.04
HNF4AP41235 SNRPGP17-201ENST00000603780 214 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 AC103810.6-201ENST00000606708 136 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 AL050343.2-201ENST00000607338 280 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 AC046143.2-201ENST00000609789 160 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 AC022202.1-201ENST00000613515 211 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 MIR6128-201ENST00000615528 109 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 SDR42E1P4-201ENST00000620894 481 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 AC007792.1-201ENST00000623023 402 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 MTND4LP32-201ENST00000636111 270 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 U4.7-201ENST00000638126 106 ntBASIC2.29□□□□□ -2.04
HNF4AP41235 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HNF4AP41235 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.29□□□□□ -2.04
HNF4AP41235 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
HNF4AP41235 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.28□□□□□ -2.04
HNF4AP41235 RNU6-78P-201ENST00000362897 107 ntBASIC2.28□□□□□ -2.04
HNF4AP41235 RNU6-1159P-201ENST00000362933 107 ntBASIC2.28□□□□□ -2.04
HNF4AP41235 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HNF4AP41235 Y_RNA.384-201ENST00000383909 102 ntBASIC2.28□□□□□ -2.04
HNF4AP41235 Y_RNA.473-201ENST00000384333 102 ntBASIC2.28□□□□□ -2.04
HNF4AP41235 SNORD116-29-201ENST00000384516 83 ntBASIC2.28□□□□□ -2.04
HNF4AP41235 RNU6-306P-201ENST00000384617 107 ntBASIC2.28□□□□□ -2.04
HNF4AP41235 AL030996.1-201ENST00000411430 235 ntBASIC2.28□□□□□ -2.04
HNF4AP41235 AL356379.1-201ENST00000414105 126 ntBASIC2.28□□□□□ -2.04
HNF4AP41235 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.28□□□□□ -2.04
HNF4AP41235 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.28□□□□□ -2.04
HNF4AP41235 AC013470.1-201ENST00000453438 462 ntBASIC2.28□□□□□ -2.04
HNF4AP41235 Y_RNA.635-201ENST00000459041 101 ntBASIC2.28□□□□□ -2.04
HNF4AP41235 snoU13.14-201ENST00000459372 104 ntBASIC2.28□□□□□ -2.04
HNF4AP41235 RN7SL636P-201ENST00000497504 294 ntBASIC2.28□□□□□ -2.04
HNF4AP41235 HMGB1P35-201ENST00000503360 598 ntBASIC2.28□□□□□ -2.04
HNF4AP41235 AC234781.5-201ENST00000508429 271 ntBASIC2.28□□□□□ -2.04
HNF4AP41235 RNU6-559P-201ENST00000516151 98 ntBASIC2.28□□□□□ -2.04
HNF4AP41235 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.28□□□□□ -2.04
HNF4AP41235 APOOP3-201ENST00000536787 586 ntBASIC2.28□□□□□ -2.04
HNF4AP41235 TRAV32-201ENST00000553993 340 ntBASIC2.28□□□□□ -2.04
HNF4AP41235 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.28□□□□□ -2.04
HNF4AP41235 MIR4287-201ENST00000579398 78 ntBASIC2.28□□□□□ -2.04
HNF4AP41235 IGHVIII-44-202ENST00000636235 289 ntBASIC2.28□□□□□ -2.04
HNF4AP41235 AC002543.1-201ENST00000299783 1954 ntBASIC2.28□□□□□ -2.04
HNF4AP41235 AC005336.3-201ENST00000623833 2679 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms