Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 SNORD53-201ENST00000579969 78 ntBASIC2.37□□□□□ -2.03
HADHAP40939 MIR3672-201ENST00000584290 82 ntBASIC2.37□□□□□ -2.03
HADHAP40939 AC018638.8-201ENST00000588755 281 ntBASIC2.37□□□□□ -2.03
HADHAP40939 AP000654.2-201ENST00000605633 586 ntBASIC2.37□□□□□ -2.03
HADHAP40939 AL022345.1-201ENST00000607292 135 ntBASIC2.37□□□□□ -2.03
HADHAP40939 AC064859.1-201ENST00000624741 174 ntBASIC2.37□□□□□ -2.03
HADHAP40939 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
HADHAP40939 RNU6-1252P-201ENST00000363054 104 ntBASIC2.36□□□□□ -2.03
HADHAP40939 SNORD116-11-201ENST00000383882 92 ntBASIC2.36□□□□□ -2.03
HADHAP40939 RNU6-784P-201ENST00000384330 106 ntBASIC2.36□□□□□ -2.03
HADHAP40939 RNU6-95P-201ENST00000384697 107 ntBASIC2.36□□□□□ -2.03
HADHAP40939 MIR29C-201ENST00000385231 88 ntBASIC2.36□□□□□ -2.03
HADHAP40939 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.36□□□□□ -2.03
HADHAP40939 PCMTD1P1-201ENST00000455560 355 ntBASIC2.36□□□□□ -2.03
HADHAP40939 TRBV12-1-201ENST00000479785 344 ntBASIC2.36□□□□□ -2.03
HADHAP40939 RPL39P5-202ENST00000512505 151 ntBASIC2.36□□□□□ -2.03
HADHAP40939 EIF4A1P12-201ENST00000551910 141 ntBASIC2.36□□□□□ -2.03
HADHAP40939 MIR4529-201ENST00000578110 78 ntBASIC2.36□□□□□ -2.03
HADHAP40939 MIR5694-201ENST00000581190 76 ntBASIC2.36□□□□□ -2.03
HADHAP40939 AC060780.3-201ENST00000589464 80 ntBASIC2.36□□□□□ -2.03
HADHAP40939 AL078605.1-201ENST00000603529 500 ntBASIC2.36□□□□□ -2.03
HADHAP40939 PCGEM1.1-201ENST00000613431 131 ntBASIC2.36□□□□□ -2.03
HADHAP40939 AC063943.3-201ENST00000615562 356 ntBASIC2.36□□□□□ -2.03
HADHAP40939 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.36□□□□□ -2.03
HADHAP40939 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
HADHAP40939 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HADHAP40939 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HADHAP40939 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HADHAP40939 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.35□□□□□ -2.03
HADHAP40939 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HADHAP40939 MIRLET7G-201ENST00000362280 84 ntBASIC2.35□□□□□ -2.03
HADHAP40939 Y_RNA.72-201ENST00000362894 103 ntBASIC2.35□□□□□ -2.03
HADHAP40939 XGY1-201ENST00000381172 446 ntBASIC2.35□□□□□ -2.03
HADHAP40939 RNU6-1286P-201ENST00000383871 107 ntBASIC2.35□□□□□ -2.03
HADHAP40939 SNORA70B-201ENST00000384210 135 ntBASIC2.35□□□□□ -2.03
HADHAP40939 RPS26P42-201ENST00000413485 326 ntBASIC2.35□□□□□ -2.03
HADHAP40939 AL353572.1-201ENST00000442490 417 ntBASIC2.35□□□□□ -2.03
HADHAP40939 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.35□□□□□ -2.03
HADHAP40939 RN7SL636P-201ENST00000497504 294 ntBASIC2.35□□□□□ -2.03
HADHAP40939 AC005741.1-201ENST00000511094 432 ntBASIC2.35□□□□□ -2.03
HADHAP40939 AC008413.1-201ENST00000511864 177 ntBASIC2.35□□□□□ -2.03
HADHAP40939 RNU6-358P-201ENST00000516564 75 ntBASIC2.35□□□□□ -2.03
HADHAP40939 RNU2-19P-201ENST00000517288 84 ntBASIC2.35□□□□□ -2.03
HADHAP40939 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.35□□□□□ -2.03
HADHAP40939 AP003033.1-201ENST00000527244 415 ntBASIC2.35□□□□□ -2.03
HADHAP40939 AP005639.2-201ENST00000527592 928 ntBASIC2.35□□□□□ -2.03
HADHAP40939 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.35□□□□□ -2.03
HADHAP40939 BNIP3P10-201ENST00000605360 577 ntBASIC2.35□□□□□ -2.03
HADHAP40939 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.35□□□□□ -2.03
HADHAP40939 AC137590.2-201ENST00000619709 240 ntBASIC2.35□□□□□ -2.03
HADHAP40939 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
HADHAP40939 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HADHAP40939 AL596028.1-201ENST00000326971 197 ntBASIC2.34□□□□□ -2.03
HADHAP40939 RNU6-26P-201ENST00000383985 107 ntBASIC2.34□□□□□ -2.03
HADHAP40939 MIR521-1-201ENST00000384902 87 ntBASIC2.34□□□□□ -2.03
HADHAP40939 AL357139.1-201ENST00000407792 426 ntBASIC2.34□□□□□ -2.03
HADHAP40939 RN7SKP192-201ENST00000411291 327 ntBASIC2.34□□□□□ -2.03
HADHAP40939 AL135786.1-201ENST00000415892 214 ntBASIC2.34□□□□□ -2.03
HADHAP40939 AC009963.1-201ENST00000417265 157 ntBASIC2.34□□□□□ -2.03
HADHAP40939 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.34□□□□□ -2.03
HADHAP40939 AC130509.1-201ENST00000464158 433 ntBASIC2.34□□□□□ -2.03
HADHAP40939 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.34□□□□□ -2.03
HADHAP40939 AC055731.1-201ENST00000474387 401 ntBASIC2.34□□□□□ -2.03
HADHAP40939 MIR5007-201ENST00000583098 95 ntBASIC2.34□□□□□ -2.03
HADHAP40939 AC007229.1-201ENST00000590455 412 ntBASIC2.34□□□□□ -2.03
HADHAP40939 AL031274.2-201ENST00000599419 203 ntBASIC2.34□□□□□ -2.03
HADHAP40939 AC146944.4-201ENST00000602697 718 ntBASIC2.34□□□□□ -2.03
HADHAP40939 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.34□□□□□ -2.04
HADHAP40939 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
HADHAP40939 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
HADHAP40939 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HADHAP40939 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HADHAP40939 Y_RNA.123-201ENST00000363338 102 ntBASIC2.33□□□□□ -2.04
HADHAP40939 RNU6-790P-201ENST00000384479 105 ntBASIC2.33□□□□□ -2.04
HADHAP40939 RNU4-53P-201ENST00000410828 140 ntBASIC2.33□□□□□ -2.04
HADHAP40939 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.33□□□□□ -2.04
HADHAP40939 MTND1P11-201ENST00000456661 876 ntBASIC2.33□□□□□ -2.04
HADHAP40939 RNU7-187P-201ENST00000458985 68 ntBASIC2.33□□□□□ -2.04
HADHAP40939 AC021146.2-201ENST00000504736 556 ntBASIC2.33□□□□□ -2.04
HADHAP40939 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.33□□□□□ -2.04
HADHAP40939 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.33□□□□□ -2.04
HADHAP40939 AC009994.1-201ENST00000606889 253 ntBASIC2.33□□□□□ -2.04
HADHAP40939 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.33□□□□□ -2.04
HADHAP40939 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
HADHAP40939 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HADHAP40939 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.32□□□□□ -2.04
HADHAP40939 RNU5B-2P-201ENST00000363036 113 ntBASIC2.32□□□□□ -2.04
HADHAP40939 SNORA16B-201ENST00000364674 135 ntBASIC2.32□□□□□ -2.04
HADHAP40939 RNU6-968P-201ENST00000384076 107 ntBASIC2.32□□□□□ -2.04
HADHAP40939 SNORA29-201ENST00000384183 140 ntBASIC2.32□□□□□ -2.04
HADHAP40939 RNU6-831P-201ENST00000384548 107 ntBASIC2.32□□□□□ -2.04
HADHAP40939 MIR17-201ENST00000385012 84 ntBASIC2.32□□□□□ -2.04
HADHAP40939 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
HADHAP40939 MTND1P23-201ENST00000416931 372 ntBASIC2.32□□□□□ -2.04
HADHAP40939 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.32□□□□□ -2.04
HADHAP40939 AL139396.1-201ENST00000421137 167 ntBASIC2.32□□□□□ -2.04
HADHAP40939 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.32□□□□□ -2.04
HADHAP40939 NFU1P2-201ENST00000448700 469 ntBASIC2.32□□□□□ -2.04
HADHAP40939 AL513124.1-201ENST00000450410 614 ntBASIC2.32□□□□□ -2.04
HADHAP40939 PRELID3BP1-201ENST00000457142 540 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms