Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC109329.2-201ENST00000519658 482 ntBASIC2.84□□□□□ -1.95
CIITAP33076 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.84□□□□□ -1.95
CIITAP33076 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.84□□□□□ -1.95
CIITAP33076 AC104984.5-201ENST00000586878 94 ntBASIC2.84□□□□□ -1.95
CIITAP33076 AC016925.2-201ENST00000605108 242 ntBASIC2.84□□□□□ -1.95
CIITAP33076 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.84□□□□□ -1.95
CIITAP33076 PART1_1.1-201ENST00000611761 217 ntBASIC2.84□□□□□ -1.95
CIITAP33076 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.84□□□□□ -1.95
CIITAP33076 uc_338.14-201ENST00000613162 166 ntBASIC2.84□□□□□ -1.95
CIITAP33076 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.84□□□□□ -1.95
CIITAP33076 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CIITAP33076 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.84□□□□□ -1.96
CIITAP33076 RNU6-527P-201ENST00000363425 104 ntBASIC2.83□□□□□ -1.96
CIITAP33076 SNORD32A-201ENST00000364805 84 ntBASIC2.83□□□□□ -1.96
CIITAP33076 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.83□□□□□ -1.96
CIITAP33076 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.83□□□□□ -1.96
CIITAP33076 EIF4EP2-201ENST00000422816 654 ntBASIC2.83□□□□□ -1.96
CIITAP33076 MTND2P23-201ENST00000422990 651 ntBASIC2.83□□□□□ -1.96
CIITAP33076 PTGES3P4-201ENST00000426243 356 ntBASIC2.83□□□□□ -1.96
CIITAP33076 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.83□□□□□ -1.96
CIITAP33076 AL513328.1-201ENST00000446460 224 ntBASIC2.83□□□□□ -1.96
CIITAP33076 RPL23AP49-201ENST00000492925 468 ntBASIC2.83□□□□□ -1.96
CIITAP33076 GZMAP1-201ENST00000503054 631 ntBASIC2.83□□□□□ -1.96
CIITAP33076 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.83□□□□□ -1.96
CIITAP33076 AC091874.1-201ENST00000511402 339 ntBASIC2.83□□□□□ -1.96
CIITAP33076 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.83□□□□□ -1.96
CIITAP33076 ACA59.2-201ENST00000517061 156 ntBASIC2.83□□□□□ -1.96
CIITAP33076 CKS1BP7-201ENST00000522230 235 ntBASIC2.83□□□□□ -1.96
CIITAP33076 AC027176.1-201ENST00000560204 514 ntBASIC2.83□□□□□ -1.96
CIITAP33076 AC009163.5-201ENST00000575421 637 ntBASIC2.83□□□□□ -1.96
CIITAP33076 MIR5701-3-201ENST00000578890 82 ntBASIC2.83□□□□□ -1.96
CIITAP33076 MIR4273-201ENST00000582824 84 ntBASIC2.83□□□□□ -1.96
CIITAP33076 MIR5701-1-201ENST00000585138 82 ntBASIC2.83□□□□□ -1.96
CIITAP33076 AC091152.3-201ENST00000604227 325 ntBASIC2.83□□□□□ -1.96
CIITAP33076 AC009318.2-201ENST00000610917 651 ntBASIC2.83□□□□□ -1.96
CIITAP33076 MIR5701-2-201ENST00000615634 82 ntBASIC2.83□□□□□ -1.96
CIITAP33076 HMGB1P24-202ENST00000615653 685 ntBASIC2.83□□□□□ -1.96
CIITAP33076 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.83□□□□□ -1.96
CIITAP33076 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.83□□□□□ -1.96
CIITAP33076 MIR7157-201ENST00000635801 60 ntBASIC2.83□□□□□ -1.96
CIITAP33076 MIR7515-201ENST00000637837 67 ntBASIC2.83□□□□□ -1.96
CIITAP33076 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.83□□□□□ -1.96
CIITAP33076 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.83□□□□□ -1.96
CIITAP33076 MTND4P1-201ENST00000457501 1466 ntBASIC2.83□□□□□ -1.96
CIITAP33076 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CIITAP33076 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.82□□□□□ -1.96
CIITAP33076 AC016717.2-201ENST00000609089 5141 ntBASIC2.82□□□□□ -1.96
CIITAP33076 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CIITAP33076 SNORD56.1-201ENST00000362913 68 ntBASIC2.82□□□□□ -1.96
CIITAP33076 RNU6-595P-201ENST00000363944 107 ntBASIC2.82□□□□□ -1.96
CIITAP33076 RNU6-1032P-201ENST00000384100 107 ntBASIC2.82□□□□□ -1.96
CIITAP33076 RNU6-843P-201ENST00000384454 104 ntBASIC2.82□□□□□ -1.96
CIITAP33076 RNU6-1160P-201ENST00000384546 104 ntBASIC2.82□□□□□ -1.96
CIITAP33076 RNU6-19P-201ENST00000384718 107 ntBASIC2.82□□□□□ -1.96
CIITAP33076 AL160004.2-201ENST00000432935 350 ntBASIC2.82□□□□□ -1.96
CIITAP33076 AL353997.1-201ENST00000432936 108 ntBASIC2.82□□□□□ -1.96
CIITAP33076 CHEK2P4-201ENST00000450340 246 ntBASIC2.82□□□□□ -1.96
CIITAP33076 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.82□□□□□ -1.96
CIITAP33076 MED28P2-201ENST00000475771 317 ntBASIC2.82□□□□□ -1.96
CIITAP33076 RN7SL429P-201ENST00000479090 223 ntBASIC2.82□□□□□ -1.96
CIITAP33076 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.82□□□□□ -1.96
CIITAP33076 RN7SL489P-201ENST00000486185 223 ntBASIC2.82□□□□□ -1.96
CIITAP33076 RN7SL327P-201ENST00000488659 223 ntBASIC2.82□□□□□ -1.96
CIITAP33076 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.82□□□□□ -1.96
CIITAP33076 RN7SL853P-201ENST00000617250 223 ntBASIC2.82□□□□□ -1.96
CIITAP33076 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.82□□□□□ -1.96
CIITAP33076 CTSLP2-204ENST00000629029 392 ntBASIC2.82□□□□□ -1.96
CIITAP33076 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CIITAP33076 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.82□□□□□ -1.96
CIITAP33076 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CIITAP33076 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CIITAP33076 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
CIITAP33076 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CIITAP33076 RNY1P16-201ENST00000363063 111 ntBASIC2.81□□□□□ -1.96
CIITAP33076 RNU6-461P-201ENST00000364195 107 ntBASIC2.81□□□□□ -1.96
CIITAP33076 RNU6-99P-201ENST00000364721 107 ntBASIC2.81□□□□□ -1.96
CIITAP33076 SET-203ENST00000372688 801 ntTSL 2 BASIC2.81□□□□□ -1.96
CIITAP33076 RNU6-622P-201ENST00000384272 103 ntBASIC2.81□□□□□ -1.96
CIITAP33076 RNU6-748P-201ENST00000384648 107 ntBASIC2.81□□□□□ -1.96
CIITAP33076 MIR147B-201ENST00000390185 80 ntBASIC2.81□□□□□ -1.96
CIITAP33076 AL359511.1-201ENST00000402970 211 ntBASIC2.81□□□□□ -1.96
CIITAP33076 MICF-203ENST00000432679 129 ntBASIC2.81□□□□□ -1.96
CIITAP33076 AC004383.1-201ENST00000438135 289 ntBASIC2.81□□□□□ -1.96
CIITAP33076 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.81□□□□□ -1.96
CIITAP33076 AC107626.1-201ENST00000471084 183 ntBASIC2.81□□□□□ -1.96
CIITAP33076 RPL23AP70-201ENST00000483361 460 ntBASIC2.81□□□□□ -1.96
CIITAP33076 RPL17P19-201ENST00000489069 552 ntBASIC2.81□□□□□ -1.96
CIITAP33076 RNU6-307P-201ENST00000516743 106 ntBASIC2.81□□□□□ -1.96
CIITAP33076 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CIITAP33076 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.81□□□□□ -1.96
CIITAP33076 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CIITAP33076 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CIITAP33076 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CIITAP33076 ZNF299P-201ENST00000406845 1804 ntBASIC2.8□□□□□ -1.96
CIITAP33076 MTND5P9-201ENST00000503854 1755 ntBASIC2.8□□□□□ -1.96
CIITAP33076 MIR449A-201ENST00000362113 91 ntBASIC2.8□□□□□ -1.96
CIITAP33076 RNU6-858P-201ENST00000362436 107 ntBASIC2.8□□□□□ -1.96
CIITAP33076 Y_RNA.123-201ENST00000363338 102 ntBASIC2.8□□□□□ -1.96
CIITAP33076 RNU6-301P-201ENST00000384277 107 ntBASIC2.8□□□□□ -1.96
CIITAP33076 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms