Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
HOXC13P31276 Y_RNA.187-201ENST00000363918 113 ntBASIC2.57□□□□□ -2
HOXC13P31276 Y_RNA.339-201ENST00000365325 102 ntBASIC2.57□□□□□ -2
HOXC13P31276 RNU6-1222P-201ENST00000384615 107 ntBASIC2.57□□□□□ -2
HOXC13P31276 MTCYBP10-201ENST00000424905 650 ntBASIC2.57□□□□□ -2
HOXC13P31276 AL591806.2-201ENST00000433122 173 ntBASIC2.57□□□□□ -2
HOXC13P31276 AL137792.2-201ENST00000443484 235 ntBASIC2.57□□□□□ -2
HOXC13P31276 RPL30P15-201ENST00000457129 321 ntBASIC2.57□□□□□ -2
HOXC13P31276 AC006026.2-201ENST00000457376 180 ntBASIC2.57□□□□□ -2
HOXC13P31276 AC112771.1-201ENST00000463581 102 ntBASIC2.57□□□□□ -2
HOXC13P31276 GMFBP1-201ENST00000467831 427 ntBASIC2.57□□□□□ -2
HOXC13P31276 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.57□□□□□ -2
HOXC13P31276 CCDC34P1-201ENST00000507441 517 ntBASIC2.57□□□□□ -2
HOXC13P31276 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.57□□□□□ -2
HOXC13P31276 FAM206BP-201ENST00000510179 541 ntBASIC2.57□□□□□ -2
HOXC13P31276 SMURF2P1-201ENST00000514992 481 ntBASIC2.57□□□□□ -2
HOXC13P31276 SNORA25.11-201ENST00000515935 105 ntBASIC2.57□□□□□ -2
HOXC13P31276 RNU6-1038P-201ENST00000516516 104 ntBASIC2.57□□□□□ -2
HOXC13P31276 AP004607.1-201ENST00000524456 203 ntBASIC2.57□□□□□ -2
HOXC13P31276 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.57□□□□□ -2
HOXC13P31276 AC004486.1-201ENST00000546846 233 ntBASIC2.57□□□□□ -2
HOXC13P31276 AC079598.5-201ENST00000547460 117 ntBASIC2.57□□□□□ -2
HOXC13P31276 MIR5694-201ENST00000581190 76 ntBASIC2.57□□□□□ -2
HOXC13P31276 MIR3942-201ENST00000585264 109 ntBASIC2.57□□□□□ -2
HOXC13P31276 AL512605.2-201ENST00000592972 256 ntBASIC2.57□□□□□ -2
HOXC13P31276 AC073539.2-201ENST00000597113 165 ntBASIC2.57□□□□□ -2
HOXC13P31276 AL022345.1-201ENST00000607292 135 ntBASIC2.57□□□□□ -2
HOXC13P31276 AC046143.2-201ENST00000609789 160 ntBASIC2.57□□□□□ -2
HOXC13P31276 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.57□□□□□ -2
HOXC13P31276 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.57□□□□□ -2
HOXC13P31276 AC011155.2-201ENST00000623202 216 ntBASIC2.57□□□□□ -2
HOXC13P31276 MIR3529-201ENST00000637713 78 ntBASIC2.57□□□□□ -2
HOXC13P31276 RNU6-1252P-201ENST00000363054 104 ntBASIC2.56□□□□□ -2
HOXC13P31276 Y_RNA.100-201ENST00000363141 102 ntBASIC2.56□□□□□ -2
HOXC13P31276 Y_RNA.148-201ENST00000363557 117 ntBASIC2.56□□□□□ -2
HOXC13P31276 SNORD14B-201ENST00000364533 90 ntBASIC2.56□□□□□ -2
HOXC13P31276 RNU6-38P-201ENST00000384085 107 ntBASIC2.56□□□□□ -2
HOXC13P31276 RNU6-72P-201ENST00000384285 79 ntBASIC2.56□□□□□ -2
HOXC13P31276 MIR514A2-201ENST00000385131 88 ntBASIC2.56□□□□□ -2
HOXC13P31276 MIR514A3-201ENST00000385132 88 ntBASIC2.56□□□□□ -2
HOXC13P31276 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.56□□□□□ -2
HOXC13P31276 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.56□□□□□ -2
HOXC13P31276 AC114482.1-201ENST00000418010 247 ntBASIC2.56□□□□□ -2
HOXC13P31276 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.56□□□□□ -2
HOXC13P31276 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.56□□□□□ -2
HOXC13P31276 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.56□□□□□ -2
HOXC13P31276 RPS12P2-201ENST00000439728 269 ntBASIC2.56□□□□□ -2
HOXC13P31276 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.56□□□□□ -2
HOXC13P31276 AL731563.1-201ENST00000442202 214 ntBASIC2.56□□□□□ -2
HOXC13P31276 PRPS1P1-201ENST00000445305 876 ntBASIC2.56□□□□□ -2
HOXC13P31276 AC107399.1-201ENST00000451226 265 ntBASIC2.56□□□□□ -2
HOXC13P31276 SUMO1P2-201ENST00000452524 304 ntBASIC2.56□□□□□ -2
HOXC13P31276 RPS29P15-201ENST00000458329 171 ntBASIC2.56□□□□□ -2
HOXC13P31276 RNU7-152P-201ENST00000458982 64 ntBASIC2.56□□□□□ -2
HOXC13P31276 RNU6-333P-201ENST00000459117 107 ntBASIC2.56□□□□□ -2
HOXC13P31276 MIR2053-201ENST00000459295 91 ntBASIC2.56□□□□□ -2
HOXC13P31276 MTCO1P29-201ENST00000496868 288 ntBASIC2.56□□□□□ -2
HOXC13P31276 RN7SL636P-201ENST00000497504 294 ntBASIC2.56□□□□□ -2
HOXC13P31276 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.56□□□□□ -2
HOXC13P31276 MTCO2P24-201ENST00000515611 426 ntBASIC2.56□□□□□ -2
HOXC13P31276 RNU6-1088P-201ENST00000516850 104 ntBASIC2.56□□□□□ -2
HOXC13P31276 RNU6-1271P-201ENST00000517049 105 ntBASIC2.56□□□□□ -2
HOXC13P31276 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.56□□□□□ -2
HOXC13P31276 AC015712.3-201ENST00000559380 164 ntBASIC2.56□□□□□ -2
HOXC13P31276 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.56□□□□□ -2
HOXC13P31276 MIR4680-201ENST00000580906 66 ntBASIC2.56□□□□□ -2
HOXC13P31276 MIR4775-201ENST00000581168 75 ntBASIC2.56□□□□□ -2
HOXC13P31276 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.56□□□□□ -2
HOXC13P31276 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.56□□□□□ -2
HOXC13P31276 U4.1-201ENST00000620349 87 ntBASIC2.56□□□□□ -2
HOXC13P31276 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
HOXC13P31276 Y_RNA.47-201ENST00000362697 108 ntBASIC2.55□□□□□ -2
HOXC13P31276 Y_RNA.188-201ENST00000363952 111 ntBASIC2.55□□□□□ -2
HOXC13P31276 RNU4-48P-201ENST00000365559 182 ntBASIC2.55□□□□□ -2
HOXC13P31276 Y_RNA.557-201ENST00000384680 107 ntBASIC2.55□□□□□ -2
HOXC13P31276 MIR548K-201ENST00000408406 116 ntBASIC2.55□□□□□ -2
HOXC13P31276 MIR548F4-201ENST00000408515 105 ntBASIC2.55□□□□□ -2
HOXC13P31276 RPL37P10-201ENST00000412884 288 ntBASIC2.55□□□□□ -2
HOXC13P31276 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
HOXC13P31276 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.55□□□□□ -2
HOXC13P31276 MTND2P29-201ENST00000438595 412 ntBASIC2.55□□□□□ -2
HOXC13P31276 AC009238.1-201ENST00000442165 424 ntBASIC2.55□□□□□ -2
HOXC13P31276 AC009237.6-201ENST00000446969 424 ntBASIC2.55□□□□□ -2
HOXC13P31276 AL360271.2-201ENST00000447710 161 ntBASIC2.55□□□□□ -2
HOXC13P31276 MTCO3P10-201ENST00000455912 772 ntBASIC2.55□□□□□ -2
HOXC13P31276 MED28P2-201ENST00000475771 317 ntBASIC2.55□□□□□ -2
HOXC13P31276 AC091885.1-201ENST00000506658 268 ntBASIC2.55□□□□□ -2
HOXC13P31276 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.55□□□□□ -2
HOXC13P31276 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.55□□□□□ -2
HOXC13P31276 AC026782.1-201ENST00000512952 449 ntBASIC2.55□□□□□ -2
HOXC13P31276 AC104136.1-201ENST00000512969 394 ntBASIC2.55□□□□□ -2
HOXC13P31276 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.55□□□□□ -2
HOXC13P31276 RNU6-864P-201ENST00000516256 108 ntBASIC2.55□□□□□ -2
HOXC13P31276 SNORD27.1-201ENST00000516319 72 ntBASIC2.55□□□□□ -2
HOXC13P31276 RN7SKP295-201ENST00000517264 153 ntBASIC2.55□□□□□ -2
HOXC13P31276 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.55□□□□□ -2
HOXC13P31276 CR383656.8-201ENST00000549046 145 ntBASIC2.55□□□□□ -2
HOXC13P31276 AL109918.3-201ENST00000603072 338 ntBASIC2.55□□□□□ -2
HOXC13P31276 CYP2C61P-201ENST00000604072 290 ntBASIC2.55□□□□□ -2
HOXC13P31276 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms