Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 U2.5-201ENST00000619465 191 ntBASIC4.11□□□□□ -1.75
HOXA10P31260 U2.10-201ENST00000620268 191 ntBASIC4.11□□□□□ -1.75
HOXA10P31260 AC006386.2-201ENST00000624491 75 ntBASIC4.11□□□□□ -1.75
HOXA10P31260 AC012005.1-201ENST00000624575 75 ntBASIC4.11□□□□□ -1.75
HOXA10P31260 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HOXA10P31260 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXA10P31260 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXA10P31260 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXA10P31260 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXA10P31260 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXA10P31260 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXA10P31260 AC091152.2-201ENST00000591628 2569 ntBASIC4.1□□□□□ -1.75
HOXA10P31260 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA10P31260 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA10P31260 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA10P31260 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXA10P31260 Y_RNA.182-201ENST00000363880 111 ntBASIC4.1□□□□□ -1.75
HOXA10P31260 SNORA44-201ENST00000384584 132 ntBASIC4.1□□□□□ -1.75
HOXA10P31260 MIR10B-201ENST00000385011 110 ntBASIC4.1□□□□□ -1.75
HOXA10P31260 MIR329-1-201ENST00000385028 80 ntBASIC4.1□□□□□ -1.75
HOXA10P31260 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXA10P31260 EIF1AXP1-201ENST00000419267 435 ntBASIC4.1□□□□□ -1.75
HOXA10P31260 PTGES3P4-201ENST00000426243 356 ntBASIC4.1□□□□□ -1.75
HOXA10P31260 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXA10P31260 Y_RNA.686-201ENST00000516548 134 ntBASIC4.1□□□□□ -1.75
HOXA10P31260 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXA10P31260 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXA10P31260 AL391261.3-201ENST00000557194 520 ntBASIC4.1□□□□□ -1.75
HOXA10P31260 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXA10P31260 AC005176.2-201ENST00000596933 147 ntBASIC4.1□□□□□ -1.75
HOXA10P31260 AL162713.1-201ENST00000604480 262 ntBASIC4.1□□□□□ -1.75
HOXA10P31260 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA10P31260 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
HOXA10P31260 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
HOXA10P31260 ZNF204P-201ENST00000416749 2397 ntBASIC4.1□□□□□ -1.75
HOXA10P31260 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXA10P31260 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXA10P31260 RNU5B-2P-201ENST00000363036 113 ntBASIC4.09□□□□□ -1.75
HOXA10P31260 RNU6-275P-201ENST00000364910 107 ntBASIC4.09□□□□□ -1.75
HOXA10P31260 RNU6-80P-201ENST00000384195 107 ntBASIC4.09□□□□□ -1.75
HOXA10P31260 RNU6-166P-201ENST00000384371 107 ntBASIC4.09□□□□□ -1.75
HOXA10P31260 RNU6-837P-201ENST00000391056 108 ntBASIC4.09□□□□□ -1.75
HOXA10P31260 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXA10P31260 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXA10P31260 AC124916.1-201ENST00000444020 547 ntBASIC4.09□□□□□ -1.75
HOXA10P31260 AL357552.1-201ENST00000445254 415 ntBASIC4.09□□□□□ -1.75
HOXA10P31260 AC005042.3-201ENST00000453230 174 ntBASIC4.09□□□□□ -1.75
HOXA10P31260 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.09□□□□□ -1.75
HOXA10P31260 RNU6-191P-201ENST00000516295 94 ntBASIC4.09□□□□□ -1.75
HOXA10P31260 RNA5SP170-201ENST00000517150 101 ntBASIC4.09□□□□□ -1.75
HOXA10P31260 RN7SKP234-201ENST00000517173 224 ntBASIC4.09□□□□□ -1.75
HOXA10P31260 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA10P31260 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA10P31260 AC093732.2-201ENST00000607950 274 ntBASIC4.09□□□□□ -1.75
HOXA10P31260 XIST_intron.1-201ENST00000619444 68 ntBASIC4.09□□□□□ -1.75
HOXA10P31260 AC022149.2-201ENST00000621061 203 ntBASIC4.09□□□□□ -1.75
HOXA10P31260 AC048347.1-201ENST00000624621 427 ntBASIC4.09□□□□□ -1.75
HOXA10P31260 AC008873.1-201ENST00000625051 138 ntBASIC4.09□□□□□ -1.75
HOXA10P31260 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA10P31260 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
HOXA10P31260 CEP170P1-201ENST00000502249 4587 ntBASIC4.08□□□□□ -1.76
HOXA10P31260 FTLP6-201ENST00000355274 422 ntBASIC4.08□□□□□ -1.76
HOXA10P31260 RNU6-78P-201ENST00000362897 107 ntBASIC4.08□□□□□ -1.76
HOXA10P31260 RNU1-18P-201ENST00000363062 164 ntBASIC4.08□□□□□ -1.76
HOXA10P31260 RNU6-1255P-201ENST00000363434 112 ntBASIC4.08□□□□□ -1.76
HOXA10P31260 RNU6-105P-201ENST00000363909 104 ntBASIC4.08□□□□□ -1.76
HOXA10P31260 RNU4-17P-201ENST00000365598 141 ntBASIC4.08□□□□□ -1.76
HOXA10P31260 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA10P31260 RNU6-1056P-201ENST00000383996 107 ntBASIC4.08□□□□□ -1.76
HOXA10P31260 Y_RNA.563-201ENST00000384707 108 ntBASIC4.08□□□□□ -1.76
HOXA10P31260 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA10P31260 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXA10P31260 AC074290.1-201ENST00000448883 135 ntBASIC4.08□□□□□ -1.76
HOXA10P31260 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXA10P31260 RN7SL863P-201ENST00000462370 296 ntBASIC4.08□□□□□ -1.76
HOXA10P31260 AF186996.7-201ENST00000492781 209 ntBASIC4.08□□□□□ -1.76
HOXA10P31260 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXA10P31260 RNU6-1234P-201ENST00000516877 103 ntBASIC4.08□□□□□ -1.76
HOXA10P31260 RNA5SP165-201ENST00000517142 115 ntBASIC4.08□□□□□ -1.76
HOXA10P31260 RNU6-1231P-201ENST00000517185 103 ntBASIC4.08□□□□□ -1.76
HOXA10P31260 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA10P31260 CYCSP26-201ENST00000534107 320 ntBASIC4.08□□□□□ -1.76
HOXA10P31260 AL670379.2-201ENST00000604983 252 ntBASIC4.08□□□□□ -1.76
HOXA10P31260 AC005520.5-201ENST00000613926 164 ntBASIC4.08□□□□□ -1.76
HOXA10P31260 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HOXA10P31260 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
HOXA10P31260 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA10P31260 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA10P31260 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
HOXA10P31260 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.07□□□□□ -1.76
HOXA10P31260 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HOXA10P31260 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXA10P31260 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA10P31260 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA10P31260 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HOXA10P31260 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HOXA10P31260 RNU1-140P-201ENST00000365040 165 ntBASIC4.07□□□□□ -1.76
HOXA10P31260 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.07□□□□□ -1.76
HOXA10P31260 RNU6-541P-201ENST00000384709 110 ntBASIC4.07□□□□□ -1.76
HOXA10P31260 RNU6-1001P-201ENST00000411265 100 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms