Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.42□□□□□ -1.7
VARSP26640 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VARSP26640 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.42□□□□□ -1.7
VARSP26640 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VARSP26640 AC004944.1-201ENST00000517807 3059 ntBASIC4.42□□□□□ -1.7
VARSP26640 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.42□□□□□ -1.7
VARSP26640 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VARSP26640 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
VARSP26640 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VARSP26640 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
VARSP26640 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
VARSP26640 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
VARSP26640 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.41□□□□□ -1.7
VARSP26640 Y_RNA.40-201ENST00000362645 93 ntBASIC4.41□□□□□ -1.7
VARSP26640 RNU6-508P-201ENST00000363231 103 ntBASIC4.41□□□□□ -1.7
VARSP26640 RNA5SP151-201ENST00000365632 117 ntBASIC4.41□□□□□ -1.7
VARSP26640 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
VARSP26640 Y_RNA.432-201ENST00000384087 111 ntBASIC4.41□□□□□ -1.7
VARSP26640 AL603914.1-201ENST00000401964 204 ntBASIC4.41□□□□□ -1.7
VARSP26640 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.41□□□□□ -1.7
VARSP26640 AC090515.1-201ENST00000465295 476 ntBASIC4.41□□□□□ -1.7
VARSP26640 AC107626.1-201ENST00000471084 183 ntBASIC4.41□□□□□ -1.7
VARSP26640 RN7SKP289-201ENST00000517244 295 ntBASIC4.41□□□□□ -1.7
VARSP26640 AC091178.2-201ENST00000584401 117 ntBASIC4.41□□□□□ -1.7
VARSP26640 AP005019.3-201ENST00000620418 560 ntBASIC4.41□□□□□ -1.7
VARSP26640 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.41□□□□□ -1.7
VARSP26640 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.41□□□□□ -1.7
VARSP26640 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VARSP26640 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VARSP26640 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
VARSP26640 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
VARSP26640 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.4□□□□□ -1.7
VARSP26640 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.4□□□□□ -1.7
VARSP26640 RNU6-309P-201ENST00000364573 106 ntBASIC4.4□□□□□ -1.71
VARSP26640 SNORD116-13-201ENST00000384408 92 ntBASIC4.4□□□□□ -1.71
VARSP26640 MIR659-201ENST00000384963 97 ntBASIC4.4□□□□□ -1.71
VARSP26640 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.4□□□□□ -1.71
VARSP26640 RPL23AP54-201ENST00000495129 419 ntBASIC4.4□□□□□ -1.71
VARSP26640 AC145146.1-201ENST00000496370 254 ntBASIC4.4□□□□□ -1.71
VARSP26640 RNU6-1337P-201ENST00000516525 95 ntBASIC4.4□□□□□ -1.71
VARSP26640 MIR2116-201ENST00000517221 80 ntBASIC4.4□□□□□ -1.71
VARSP26640 AC025166.1-201ENST00000612411 163 ntBASIC4.4□□□□□ -1.71
VARSP26640 AC068647.1-201ENST00000489539 2265 ntBASIC4.4□□□□□ -1.71
VARSP26640 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.4□□□□□ -1.71
VARSP26640 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
VARSP26640 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
VARSP26640 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VARSP26640 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.39□□□□□ -1.71
VARSP26640 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VARSP26640 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VARSP26640 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.39□□□□□ -1.71
VARSP26640 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.39□□□□□ -1.71
VARSP26640 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.39□□□□□ -1.71
VARSP26640 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.39□□□□□ -1.71
VARSP26640 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VARSP26640 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
VARSP26640 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VARSP26640 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VARSP26640 SNORD114-19-201ENST00000363072 75 ntBASIC4.39□□□□□ -1.71
VARSP26640 RNA5SP447-201ENST00000363749 119 ntBASIC4.39□□□□□ -1.71
VARSP26640 RNU4-41P-201ENST00000364426 143 ntBASIC4.39□□□□□ -1.71
VARSP26640 U8.6-201ENST00000364939 135 ntBASIC4.39□□□□□ -1.71
VARSP26640 RNU6-106P-201ENST00000384405 107 ntBASIC4.39□□□□□ -1.71
VARSP26640 SNORA1.3-201ENST00000384676 136 ntBASIC4.39□□□□□ -1.71
VARSP26640 SNORA57.1-201ENST00000391227 145 ntBASIC4.39□□□□□ -1.71
VARSP26640 RNA5SP496-201ENST00000391240 109 ntBASIC4.39□□□□□ -1.71
VARSP26640 MIR1193-201ENST00000408109 78 ntBASIC4.39□□□□□ -1.71
VARSP26640 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.39□□□□□ -1.71
VARSP26640 AC004975.1-201ENST00000428733 208 ntBASIC4.39□□□□□ -1.71
VARSP26640 RPL23AP93-201ENST00000440847 484 ntBASIC4.39□□□□□ -1.71
VARSP26640 PPBPP1-201ENST00000510807 373 ntBASIC4.39□□□□□ -1.71
VARSP26640 RN7SKP21-201ENST00000516503 220 ntBASIC4.39□□□□□ -1.71
VARSP26640 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
VARSP26640 MIR4727-201ENST00000622232 55 ntBASIC4.39□□□□□ -1.71
VARSP26640 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
VARSP26640 AC112484.5-201ENST00000624189 228 ntBASIC4.39□□□□□ -1.71
VARSP26640 AC125257.1-201ENST00000560400 2930 ntBASIC4.39□□□□□ -1.71
VARSP26640 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
VARSP26640 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.39□□□□□ -1.71
VARSP26640 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.39□□□□□ -1.71
VARSP26640 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VARSP26640 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.38□□□□□ -1.71
VARSP26640 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
VARSP26640 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.38□□□□□ -1.71
VARSP26640 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VARSP26640 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VARSP26640 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
VARSP26640 RNA5SP388-201ENST00000362584 119 ntBASIC4.38□□□□□ -1.71
VARSP26640 RNU6-1305P-201ENST00000364353 104 ntBASIC4.38□□□□□ -1.71
VARSP26640 RNU6-294P-201ENST00000364999 102 ntBASIC4.38□□□□□ -1.71
VARSP26640 RNU6-484P-201ENST00000384016 107 ntBASIC4.38□□□□□ -1.71
VARSP26640 SDHCP2-201ENST00000398565 501 ntBASIC4.38□□□□□ -1.71
VARSP26640 RN7SKP101-201ENST00000411376 320 ntBASIC4.38□□□□□ -1.71
VARSP26640 RPS12P10-201ENST00000427031 377 ntBASIC4.38□□□□□ -1.71
VARSP26640 RNU6-437P-201ENST00000459408 95 ntBASIC4.38□□□□□ -1.71
VARSP26640 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.38□□□□□ -1.71
VARSP26640 RNU6-1299P-201ENST00000516316 100 ntBASIC4.38□□□□□ -1.71
VARSP26640 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.38□□□□□ -1.71
VARSP26640 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.38□□□□□ -1.71
VARSP26640 AC091905.2-201ENST00000623143 306 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms