Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.75□□□□□ -2.13
XRCC1P18887 BTF3L4P2-201ENST00000392798 346 ntBASIC1.75□□□□□ -2.13
XRCC1P18887 RNA5SP450-201ENST00000411206 102 ntBASIC1.75□□□□□ -2.13
XRCC1P18887 MTND2P29-201ENST00000438595 412 ntBASIC1.75□□□□□ -2.13
XRCC1P18887 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.75□□□□□ -2.13
XRCC1P18887 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.75□□□□□ -2.13
XRCC1P18887 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.75□□□□□ -2.13
XRCC1P18887 RPS29P11-201ENST00000496507 171 ntBASIC1.75□□□□□ -2.13
XRCC1P18887 Y_RNA.654-201ENST00000497848 106 ntBASIC1.75□□□□□ -2.13
XRCC1P18887 AC008628.2-201ENST00000502605 298 ntBASIC1.75□□□□□ -2.13
XRCC1P18887 Y_RNA.693-201ENST00000516641 110 ntBASIC1.75□□□□□ -2.13
XRCC1P18887 RNU6-835P-201ENST00000516974 104 ntBASIC1.75□□□□□ -2.13
XRCC1P18887 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.75□□□□□ -2.13
XRCC1P18887 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.75□□□□□ -2.13
XRCC1P18887 MIR3683-201ENST00000580847 82 ntBASIC1.75□□□□□ -2.13
XRCC1P18887 AC092747.3-201ENST00000603769 301 ntBASIC1.75□□□□□ -2.13
XRCC1P18887 AC005034.5-201ENST00000604219 466 ntBASIC1.75□□□□□ -2.13
XRCC1P18887 AC084768.2-201ENST00000622736 221 ntBASIC1.75□□□□□ -2.13
XRCC1P18887 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.75□□□□□ -2.13
XRCC1P18887 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
XRCC1P18887 Y_RNA.194-201ENST00000363985 102 ntBASIC1.74□□□□□ -2.13
XRCC1P18887 RNU6-234P-201ENST00000365229 104 ntBASIC1.74□□□□□ -2.13
XRCC1P18887 AL357139.1-201ENST00000407792 426 ntBASIC1.74□□□□□ -2.13
XRCC1P18887 MIR1262-201ENST00000408276 93 ntBASIC1.74□□□□□ -2.13
XRCC1P18887 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.74□□□□□ -2.13
XRCC1P18887 AL158823.1-201ENST00000418441 478 ntBASIC1.74□□□□□ -2.13
XRCC1P18887 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.74□□□□□ -2.13
XRCC1P18887 MTND1P1-201ENST00000445453 368 ntBASIC1.74□□□□□ -2.13
XRCC1P18887 RPL23AP3-201ENST00000453844 468 ntBASIC1.74□□□□□ -2.13
XRCC1P18887 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.74□□□□□ -2.13
XRCC1P18887 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.74□□□□□ -2.13
XRCC1P18887 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.74□□□□□ -2.13
XRCC1P18887 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.74□□□□□ -2.13
XRCC1P18887 RNU6-1069P-201ENST00000516612 133 ntBASIC1.74□□□□□ -2.13
XRCC1P18887 RNU6-250P-201ENST00000516958 103 ntBASIC1.74□□□□□ -2.13
XRCC1P18887 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.74□□□□□ -2.13
XRCC1P18887 AC021231.3-201ENST00000558497 370 ntBASIC1.74□□□□□ -2.13
XRCC1P18887 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.74□□□□□ -2.13
XRCC1P18887 AL353997.5-201ENST00000618886 171 ntBASIC1.74□□□□□ -2.13
XRCC1P18887 AC068792.1-201ENST00000621354 417 ntBASIC1.74□□□□□ -2.13
XRCC1P18887 MIR1248-201ENST00000629190 106 ntBASIC1.74□□□□□ -2.13
XRCC1P18887 ZNF702P-202ENST00000434269 1966 ntBASIC1.74□□□□□ -2.13
XRCC1P18887 ZNF72P-201ENST00000425869 1908 ntBASIC1.74□□□□□ -2.13
XRCC1P18887 AC233981.2-201ENST00000611524 1614 ntBASIC1.73□□□□□ -2.13
XRCC1P18887 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
XRCC1P18887 RNU6-26P-201ENST00000383985 107 ntBASIC1.73□□□□□ -2.13
XRCC1P18887 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
XRCC1P18887 RNU6-648P-201ENST00000410190 107 ntBASIC1.73□□□□□ -2.13
XRCC1P18887 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.73□□□□□ -2.13
XRCC1P18887 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.73□□□□□ -2.13
XRCC1P18887 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.73□□□□□ -2.13
XRCC1P18887 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.73□□□□□ -2.13
XRCC1P18887 AC105313.1-201ENST00000509121 353 ntBASIC1.73□□□□□ -2.13
XRCC1P18887 AC093259.1-201ENST00000509755 300 ntBASIC1.73□□□□□ -2.13
XRCC1P18887 SNORD60.2-201ENST00000516883 86 ntBASIC1.73□□□□□ -2.13
XRCC1P18887 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.73□□□□□ -2.13
XRCC1P18887 AC016256.1-201ENST00000547971 354 ntBASIC1.73□□□□□ -2.13
XRCC1P18887 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.73□□□□□ -2.13
XRCC1P18887 AL512360.1-201ENST00000555346 234 ntBASIC1.73□□□□□ -2.13
XRCC1P18887 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.73□□□□□ -2.13
XRCC1P18887 MIR4255-201ENST00000579351 72 ntBASIC1.73□□□□□ -2.13
XRCC1P18887 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.73□□□□□ -2.13
XRCC1P18887 RPL17P51-201ENST00000605218 238 ntBASIC1.73□□□□□ -2.13
XRCC1P18887 AL136221.1-201ENST00000621449 509 ntBASIC1.73□□□□□ -2.13
XRCC1P18887 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.73□□□□□ -2.13
XRCC1P18887 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
XRCC1P18887 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
XRCC1P18887 RNU4-24P-201ENST00000364565 139 ntBASIC1.72□□□□□ -2.13
XRCC1P18887 RNA5SP363-201ENST00000365072 115 ntBASIC1.72□□□□□ -2.13
XRCC1P18887 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.72□□□□□ -2.13
XRCC1P18887 CALM2P3-201ENST00000400429 449 ntBASIC1.72□□□□□ -2.13
XRCC1P18887 RNA5SP201-201ENST00000410316 124 ntBASIC1.72□□□□□ -2.13
XRCC1P18887 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.72□□□□□ -2.13
XRCC1P18887 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.72□□□□□ -2.13
XRCC1P18887 AC096920.1-201ENST00000423991 241 ntBASIC1.72□□□□□ -2.13
XRCC1P18887 AL353689.1-201ENST00000438895 199 ntBASIC1.72□□□□□ -2.13
XRCC1P18887 SEPT14P3-201ENST00000439401 183 ntBASIC1.72□□□□□ -2.13
XRCC1P18887 AL732372.2-207ENST00000445840 183 ntBASIC1.72□□□□□ -2.13
XRCC1P18887 MTND3P16-201ENST00000452205 344 ntBASIC1.72□□□□□ -2.13
XRCC1P18887 SEPT14P2-201ENST00000453405 183 ntBASIC1.72□□□□□ -2.13
XRCC1P18887 RNU6-1208P-201ENST00000459588 107 ntBASIC1.72□□□□□ -2.13
XRCC1P18887 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
XRCC1P18887 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.72□□□□□ -2.13
XRCC1P18887 SEPT14P4-201ENST00000513445 186 ntBASIC1.72□□□□□ -2.13
XRCC1P18887 SNORA31.16-201ENST00000516773 139 ntBASIC1.72□□□□□ -2.13
XRCC1P18887 FO082796.1-201ENST00000523795 183 ntBASIC1.72□□□□□ -2.13
XRCC1P18887 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.72□□□□□ -2.13
XRCC1P18887 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.72□□□□□ -2.13
XRCC1P18887 U1.36-201ENST00000620684 176 ntBASIC1.72□□□□□ -2.13
XRCC1P18887 AC121333.1-201ENST00000567488 2709 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 RNU1-58P-201ENST00000362413 163 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 SNORD115-3-201ENST00000363100 82 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 U3.9-201ENST00000363823 204 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 RNU6-743P-201ENST00000364151 106 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 Y_RNA.378-201ENST00000365652 113 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 Y_RNA.504-201ENST00000384481 104 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 MIR514A2-201ENST00000385131 88 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 MIR514A3-201ENST00000385132 88 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 EIF4E2P1-201ENST00000393781 255 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 MIR1283-2-201ENST00000408621 87 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms