Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 VN1R107P-201ENST00000601784 209 ntBASIC0.72□□□□□ -2.29
HIST1H1CP16403 AC078795.3-201ENST00000602913 472 ntBASIC0.72□□□□□ -2.29
HIST1H1CP16403 AL359821.1-201ENST00000605519 182 ntBASIC0.72□□□□□ -2.29
HIST1H1CP16403 MIR6857-201ENST00000613267 93 ntBASIC0.72□□□□□ -2.29
HIST1H1CP16403 AL139418.1-201ENST00000613613 177 ntBASIC0.72□□□□□ -2.29
HIST1H1CP16403 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.71□□□□□ -2.3
HIST1H1CP16403 AC092268.1-201ENST00000342691 405 ntBASIC0.71□□□□□ -2.3
HIST1H1CP16403 RNU1-76P-201ENST00000362903 159 ntBASIC0.71□□□□□ -2.3
HIST1H1CP16403 U3.4-201ENST00000363352 213 ntBASIC0.71□□□□□ -2.3
HIST1H1CP16403 SNORD114-27-201ENST00000363766 70 ntBASIC0.71□□□□□ -2.3
HIST1H1CP16403 RNU6-336P-201ENST00000364891 107 ntBASIC0.71□□□□□ -2.3
HIST1H1CP16403 Y_RNA.324-201ENST00000365165 102 ntBASIC0.71□□□□□ -2.3
HIST1H1CP16403 AC060773.1-201ENST00000421698 310 ntBASIC0.71□□□□□ -2.3
HIST1H1CP16403 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.71□□□□□ -2.3
HIST1H1CP16403 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.71□□□□□ -2.3
HIST1H1CP16403 RNU6-685P-201ENST00000517088 95 ntBASIC0.71□□□□□ -2.3
HIST1H1CP16403 SUMO2P16-201ENST00000519475 264 ntBASIC0.71□□□□□ -2.3
HIST1H1CP16403 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.71□□□□□ -2.3
HIST1H1CP16403 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.71□□□□□ -2.3
HIST1H1CP16403 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.71□□□□□ -2.3
HIST1H1CP16403 MIR4769-201ENST00000584126 77 ntBASIC0.71□□□□□ -2.3
HIST1H1CP16403 MIR4298-201ENST00000584380 73 ntBASIC0.71□□□□□ -2.3
HIST1H1CP16403 AL359999.1-201ENST00000604513 294 ntBASIC0.71□□□□□ -2.3
HIST1H1CP16403 RPL17P51-201ENST00000605218 238 ntBASIC0.71□□□□□ -2.3
HIST1H1CP16403 CTHRC1P1-201ENST00000605383 469 ntBASIC0.71□□□□□ -2.3
HIST1H1CP16403 AC018645.2-201ENST00000609151 472 ntBASIC0.71□□□□□ -2.3
HIST1H1CP16403 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.71□□□□□ -2.3
HIST1H1CP16403 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
HIST1H1CP16403 RNU6-428P-201ENST00000362942 107 ntBASIC0.7□□□□□ -2.3
HIST1H1CP16403 RNU6-660P-201ENST00000364566 109 ntBASIC0.7□□□□□ -2.3
HIST1H1CP16403 SNORA72.2-201ENST00000365028 127 ntBASIC0.7□□□□□ -2.3
HIST1H1CP16403 RNU6-418P-201ENST00000384035 107 ntBASIC0.7□□□□□ -2.3
HIST1H1CP16403 RNU6-116P-201ENST00000384042 109 ntBASIC0.7□□□□□ -2.3
HIST1H1CP16403 RNU6-45P-201ENST00000384471 107 ntBASIC0.7□□□□□ -2.3
HIST1H1CP16403 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.7□□□□□ -2.3
HIST1H1CP16403 Y_RNA.595-201ENST00000410403 105 ntBASIC0.7□□□□□ -2.3
HIST1H1CP16403 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.7□□□□□ -2.3
HIST1H1CP16403 snoU109.3-201ENST00000459477 145 ntBASIC0.7□□□□□ -2.3
HIST1H1CP16403 HMGN1P7-201ENST00000491722 313 ntBASIC0.7□□□□□ -2.3
HIST1H1CP16403 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.7□□□□□ -2.3
HIST1H1CP16403 AC091435.1-201ENST00000505442 584 ntBASIC0.7□□□□□ -2.3
HIST1H1CP16403 AF131216.2-201ENST00000512316 564 ntBASIC0.7□□□□□ -2.3
HIST1H1CP16403 AC112206.4-201ENST00000515142 405 ntBASIC0.7□□□□□ -2.3
HIST1H1CP16403 RN7SKP265-201ENST00000516448 223 ntBASIC0.7□□□□□ -2.3
HIST1H1CP16403 RNU6-165P-201ENST00000517170 99 ntBASIC0.7□□□□□ -2.3
HIST1H1CP16403 AC109479.2-201ENST00000517842 174 ntBASIC0.7□□□□□ -2.3
HIST1H1CP16403 AP003181.2-201ENST00000528941 181 ntBASIC0.7□□□□□ -2.3
HIST1H1CP16403 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.7□□□□□ -2.3
HIST1H1CP16403 AL133216.2-202ENST00000634512 349 ntBASIC0.7□□□□□ -2.3
HIST1H1CP16403 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.7□□□□□ -2.3
HIST1H1CP16403 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.69□□□□□ -2.3
HIST1H1CP16403 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
HIST1H1CP16403 RNU6-552P-201ENST00000362869 119 ntBASIC0.69□□□□□ -2.3
HIST1H1CP16403 MIR19B1-201ENST00000384829 87 ntBASIC0.69□□□□□ -2.3
HIST1H1CP16403 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
HIST1H1CP16403 RNU11-5P-201ENST00000391216 129 ntBASIC0.69□□□□□ -2.3
HIST1H1CP16403 AL606490.4-201ENST00000423117 127 ntBASIC0.69□□□□□ -2.3
HIST1H1CP16403 AC084290.1-201ENST00000434995 374 ntBASIC0.69□□□□□ -2.3
HIST1H1CP16403 USP9YP28-201ENST00000435142 589 ntBASIC0.69□□□□□ -2.3
HIST1H1CP16403 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.69□□□□□ -2.3
HIST1H1CP16403 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.69□□□□□ -2.3
HIST1H1CP16403 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.69□□□□□ -2.3
HIST1H1CP16403 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.69□□□□□ -2.3
HIST1H1CP16403 Z73417.1-201ENST00000447373 778 ntBASIC0.69□□□□□ -2.3
HIST1H1CP16403 AC007547.1-201ENST00000462177 490 ntBASIC0.69□□□□□ -2.3
HIST1H1CP16403 PDCD5P2-201ENST00000507570 312 ntBASIC0.69□□□□□ -2.3
HIST1H1CP16403 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
HIST1H1CP16403 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.69□□□□□ -2.3
HIST1H1CP16403 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.69□□□□□ -2.3
HIST1H1CP16403 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.69□□□□□ -2.3
HIST1H1CP16403 CYP4A27P-201ENST00000567218 190 ntBASIC0.69□□□□□ -2.3
HIST1H1CP16403 TMF1P1-201ENST00000576058 373 ntBASIC0.69□□□□□ -2.3
HIST1H1CP16403 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.69□□□□□ -2.3
HIST1H1CP16403 AL031775.1-201ENST00000607014 887 ntBASIC0.69□□□□□ -2.3
HIST1H1CP16403 AL353149.1-201ENST00000610667 244 ntBASIC0.69□□□□□ -2.3
HIST1H1CP16403 AL031667.3-201ENST00000620124 655 ntBASIC0.69□□□□□ -2.3
HIST1H1CP16403 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.69□□□□□ -2.3
HIST1H1CP16403 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
HIST1H1CP16403 SNORD32A-201ENST00000364805 84 ntBASIC0.68□□□□□ -2.3
HIST1H1CP16403 SNORD114-24-201ENST00000365029 72 ntBASIC0.68□□□□□ -2.3
HIST1H1CP16403 RNU6-83P-201ENST00000384568 112 ntBASIC0.68□□□□□ -2.3
HIST1H1CP16403 MIR146A-201ENST00000385201 99 ntBASIC0.68□□□□□ -2.3
HIST1H1CP16403 MIR100-201ENST00000385259 80 ntBASIC0.68□□□□□ -2.3
HIST1H1CP16403 RNU6-910P-201ENST00000390844 107 ntBASIC0.68□□□□□ -2.3
HIST1H1CP16403 SNORA26.3-201ENST00000391119 136 ntBASIC0.68□□□□□ -2.3
HIST1H1CP16403 AC002486.1-201ENST00000435098 391 ntBASIC0.68□□□□□ -2.3
HIST1H1CP16403 SNORD124-201ENST00000459577 104 ntBASIC0.68□□□□□ -2.3
HIST1H1CP16403 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.68□□□□□ -2.3
HIST1H1CP16403 HMGN1P12-201ENST00000499125 195 ntBASIC0.68□□□□□ -2.3
HIST1H1CP16403 AC016632.1-201ENST00000503994 196 ntBASIC0.68□□□□□ -2.3
HIST1H1CP16403 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.68□□□□□ -2.3
HIST1H1CP16403 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.68□□□□□ -2.3
HIST1H1CP16403 SNORA31.2-201ENST00000516019 134 ntBASIC0.68□□□□□ -2.3
HIST1H1CP16403 SNORA31.4-201ENST00000516049 129 ntBASIC0.68□□□□□ -2.3
HIST1H1CP16403 RNU6-567P-201ENST00000516746 107 ntBASIC0.68□□□□□ -2.3
HIST1H1CP16403 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.68□□□□□ -2.3
HIST1H1CP16403 AC023050.3-201ENST00000541142 333 ntBASIC0.68□□□□□ -2.3
HIST1H1CP16403 AC090888.2-201ENST00000559765 1144 ntBASIC0.68□□□□□ -2.3
HIST1H1CP16403 AL356157.2-201ENST00000605122 111 ntBASIC0.68□□□□□ -2.3
HIST1H1CP16403 RNU4-5P-201ENST00000607255 135 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms