Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AP005660.1-201ENST00000522972 293 ntBASIC1.2□□□□□ -2.22
CD28P10747 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.2□□□□□ -2.22
CD28P10747 SUB1P4-201ENST00000566062 339 ntBASIC1.2□□□□□ -2.22
CD28P10747 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.2□□□□□ -2.22
CD28P10747 MIR4424-201ENST00000585257 86 ntBASIC1.2□□□□□ -2.22
CD28P10747 AC040904.1-201ENST00000590850 223 ntBASIC1.2□□□□□ -2.22
CD28P10747 AC012507.3-201ENST00000603556 477 ntBASIC1.2□□□□□ -2.22
CD28P10747 AP001836.1-201ENST00000604675 523 ntBASIC1.2□□□□□ -2.22
CD28P10747 uc_338.5-201ENST00000611839 155 ntBASIC1.2□□□□□ -2.22
CD28P10747 AC008147.4-201ENST00000617570 1204 ntBASIC1.2□□□□□ -2.22
CD28P10747 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CD28P10747 MTND5P9-201ENST00000503854 1755 ntBASIC1.2□□□□□ -2.22
CD28P10747 AL391987.6-201ENST00000305671 199 ntBASIC1.19□□□□□ -2.22
CD28P10747 RNU6-23P-201ENST00000363283 107 ntBASIC1.19□□□□□ -2.22
CD28P10747 Y_RNA.226-201ENST00000364337 114 ntBASIC1.19□□□□□ -2.22
CD28P10747 RNU6-827P-201ENST00000365553 106 ntBASIC1.19□□□□□ -2.22
CD28P10747 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CD28P10747 RNU5A-6P-201ENST00000384136 116 ntBASIC1.19□□□□□ -2.22
CD28P10747 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.19□□□□□ -2.22
CD28P10747 RNU2-9P-201ENST00000410194 145 ntBASIC1.19□□□□□ -2.22
CD28P10747 AP000275.1-201ENST00000411943 390 ntBASIC1.19□□□□□ -2.22
CD28P10747 AC004965.1-201ENST00000413033 213 ntBASIC1.19□□□□□ -2.22
CD28P10747 AC123900.1-201ENST00000420390 96 ntBASIC1.19□□□□□ -2.22
CD28P10747 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.19□□□□□ -2.22
CD28P10747 AC073415.1-201ENST00000449240 153 ntBASIC1.19□□□□□ -2.22
CD28P10747 AC016632.1-201ENST00000503994 196 ntBASIC1.19□□□□□ -2.22
CD28P10747 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.19□□□□□ -2.22
CD28P10747 AC005741.1-201ENST00000511094 432 ntBASIC1.19□□□□□ -2.22
CD28P10747 RNVU1-2-201ENST00000516326 135 ntBASIC1.19□□□□□ -2.22
CD28P10747 SNORA31.24-201ENST00000517232 57 ntBASIC1.19□□□□□ -2.22
CD28P10747 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.19□□□□□ -2.22
CD28P10747 HIF1AP1-201ENST00000553642 175 ntBASIC1.19□□□□□ -2.22
CD28P10747 MIR3198-2-201ENST00000577868 80 ntBASIC1.19□□□□□ -2.22
CD28P10747 MIR4285-201ENST00000581001 85 ntBASIC1.19□□□□□ -2.22
CD28P10747 MTATP6P3-201ENST00000581686 676 ntBASIC1.19□□□□□ -2.22
CD28P10747 AC010928.2-201ENST00000588017 287 ntBASIC1.19□□□□□ -2.22
CD28P10747 AC005786.1-201ENST00000588553 154 ntBASIC1.19□□□□□ -2.22
CD28P10747 AL391646.1-201ENST00000603860 190 ntBASIC1.19□□□□□ -2.22
CD28P10747 PCGEM1.1-201ENST00000613431 131 ntBASIC1.19□□□□□ -2.22
CD28P10747 AL158063.1-201ENST00000615349 536 ntBASIC1.19□□□□□ -2.22
CD28P10747 AL590240.4-201ENST00000616908 390 ntBASIC1.19□□□□□ -2.22
CD28P10747 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CD28P10747 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.18□□□□□ -2.22
CD28P10747 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CD28P10747 SNORD116-8-201ENST00000384365 95 ntBASIC1.18□□□□□ -2.22
CD28P10747 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CD28P10747 MIR934-201ENST00000401241 83 ntBASIC1.18□□□□□ -2.22
CD28P10747 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.18□□□□□ -2.22
CD28P10747 VN1R36P-201ENST00000414936 291 ntBASIC1.18□□□□□ -2.22
CD28P10747 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.18□□□□□ -2.22
CD28P10747 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.18□□□□□ -2.22
CD28P10747 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.18□□□□□ -2.22
CD28P10747 MTCO3P46-201ENST00000425787 232 ntBASIC1.18□□□□□ -2.22
CD28P10747 MTCO2P19-201ENST00000427513 598 ntBASIC1.18□□□□□ -2.22
CD28P10747 CETN4P-201ENST00000432407 469 ntBASIC1.18□□□□□ -2.22
CD28P10747 AMD1P1-201ENST00000457220 922 ntBASIC1.18□□□□□ -2.22
CD28P10747 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.18□□□□□ -2.22
CD28P10747 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.18□□□□□ -2.22
CD28P10747 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.18□□□□□ -2.22
CD28P10747 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.18□□□□□ -2.22
CD28P10747 ATP5EP1-201ENST00000510257 156 ntBASIC1.18□□□□□ -2.22
CD28P10747 HSPE1P4-201ENST00000550617 308 ntBASIC1.18□□□□□ -2.22
CD28P10747 AL161670.1-201ENST00000554348 137 ntBASIC1.18□□□□□ -2.22
CD28P10747 AC103996.1-201ENST00000555468 102 ntBASIC1.18□□□□□ -2.22
CD28P10747 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.18□□□□□ -2.22
CD28P10747 MIR3923-201ENST00000579521 83 ntBASIC1.18□□□□□ -2.22
CD28P10747 MIR5583-1-201ENST00000580941 59 ntBASIC1.18□□□□□ -2.22
CD28P10747 AC110760.3-201ENST00000598794 467 ntBASIC1.18□□□□□ -2.22
CD28P10747 AC078795.3-201ENST00000602913 472 ntBASIC1.18□□□□□ -2.22
CD28P10747 AC107304.1-201ENST00000604229 296 ntBASIC1.18□□□□□ -2.22
CD28P10747 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.18□□□□□ -2.22
CD28P10747 AC073114.1-201ENST00000612027 490 ntBASIC1.18□□□□□ -2.22
CD28P10747 SNORA43.4-201ENST00000629559 138 ntBASIC1.18□□□□□ -2.22
CD28P10747 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.18□□□□□ -2.22
CD28P10747 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CD28P10747 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CD28P10747 ZNF209P-201ENST00000593450 2304 ntBASIC1.18□□□□□ -2.22
CD28P10747 AP000648.3-201ENST00000623539 4507 ntBASIC1.17□□□□□ -2.22
CD28P10747 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CD28P10747 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CD28P10747 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CD28P10747 RNY1P10-201ENST00000363268 113 ntBASIC1.17□□□□□ -2.22
CD28P10747 SNORA7.1-201ENST00000363750 139 ntBASIC1.17□□□□□ -2.22
CD28P10747 RNU4-56P-201ENST00000364700 142 ntBASIC1.17□□□□□ -2.22
CD28P10747 Y_RNA.327-201ENST00000365201 102 ntBASIC1.17□□□□□ -2.22
CD28P10747 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.17□□□□□ -2.22
CD28P10747 MIR1304-201ENST00000408243 91 ntBASIC1.17□□□□□ -2.22
CD28P10747 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.17□□□□□ -2.22
CD28P10747 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.17□□□□□ -2.22
CD28P10747 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.17□□□□□ -2.22
CD28P10747 AL354695.1-201ENST00000427935 228 ntBASIC1.17□□□□□ -2.22
CD28P10747 VN1R108P-201ENST00000431580 830 ntBASIC1.17□□□□□ -2.22
CD28P10747 MTCO2P3-201ENST00000442543 421 ntBASIC1.17□□□□□ -2.22
CD28P10747 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.17□□□□□ -2.22
CD28P10747 AC112492.4-201ENST00000456549 352 ntBASIC1.17□□□□□ -2.22
CD28P10747 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.17□□□□□ -2.22
CD28P10747 AC027575.1-201ENST00000481064 460 ntBASIC1.17□□□□□ -2.22
CD28P10747 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.17□□□□□ -2.22
CD28P10747 AC008628.2-201ENST00000502605 298 ntBASIC1.17□□□□□ -2.22
CD28P10747 HMGB1P29-201ENST00000505659 499 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms