Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 MTND4LP18-201ENST00000526864 291 ntBASIC0.6□□□□□ -2.31
UBBP0CG47 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.6□□□□□ -2.31
UBBP0CG47 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.6□□□□□ -2.31
UBBP0CG47 AC109446.1-201ENST00000566172 220 ntBASIC0.6□□□□□ -2.31
UBBP0CG47 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.6□□□□□ -2.31
UBBP0CG47 BNIP3P8-201ENST00000597863 560 ntBASIC0.6□□□□□ -2.31
UBBP0CG47 AC105148.1-201ENST00000604961 409 ntBASIC0.6□□□□□ -2.31
UBBP0CG47 AC009994.1-201ENST00000606889 253 ntBASIC0.6□□□□□ -2.31
UBBP0CG47 RNU6-87P-201ENST00000607561 108 ntBASIC0.6□□□□□ -2.31
UBBP0CG47 AC040896.1-201ENST00000613819 479 ntBASIC0.6□□□□□ -2.31
UBBP0CG47 AC005520.5-201ENST00000613926 164 ntBASIC0.6□□□□□ -2.31
UBBP0CG47 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.6□□□□□ -2.31
UBBP0CG47 AC008147.4-201ENST00000617570 1204 ntBASIC0.6□□□□□ -2.31
UBBP0CG47 AC009159.2-201ENST00000617603 606 ntBASIC0.6□□□□□ -2.31
UBBP0CG47 AC126177.8-201ENST00000618339 1015 ntBASIC0.6□□□□□ -2.31
UBBP0CG47 AC009509.4-201ENST00000619202 509 ntBASIC0.6□□□□□ -2.31
UBBP0CG47 SNORA43.4-201ENST00000629559 138 ntBASIC0.6□□□□□ -2.31
UBBP0CG47 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
UBBP0CG47 MTND4P14-201ENST00000435799 1354 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 Y_RNA.18-201ENST00000362461 102 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 RNU6-37P-201ENST00000362692 107 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 SNORD113-6-201ENST00000363345 75 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 U3.9-201ENST00000363823 204 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 RNU6-11P-201ENST00000364234 107 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 Y_RNA.324-201ENST00000365165 102 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 RNU6-25P-201ENST00000383873 107 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 RNU6-1-201ENST00000383898 107 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 RNU6-641P-201ENST00000384006 107 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 RNU6-48P-201ENST00000384161 107 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 RNU6-36P-201ENST00000384172 107 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 RNU6-4P-201ENST00000384205 107 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 RNU6-5P-201ENST00000384238 107 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 RNU6-3P-201ENST00000384314 107 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 RNU6-378P-201ENST00000384324 107 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 RNU6-16P-201ENST00000384385 107 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 RNU6-15P-201ENST00000384534 107 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 RNU6-2-201ENST00000384627 107 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 RNU6-29P-201ENST00000384637 107 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 RNU6-9-201ENST00000384776 107 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 RNU6-33P-201ENST00000384793 107 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 FGF7P8-201ENST00000402994 292 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.59□□□□□ -2.31
UBBP0CG47 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.59□□□□□ -2.31
UBBP0CG47 AC078809.1-201ENST00000427601 140 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 MTCO3P29-201ENST00000432119 779 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 HSFY7P-201ENST00000432672 318 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 HSFY8P-201ENST00000437934 318 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.59□□□□□ -2.31
UBBP0CG47 RN7SKP88-201ENST00000516847 250 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 MIR3973-201ENST00000579824 107 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 AC008088.1-201ENST00000580993 280 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 MIR4999-201ENST00000585029 91 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 AP000811.1-201ENST00000603803 651 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 Z98751.3-201ENST00000604447 521 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 RNU6-6P-201ENST00000606623 107 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 snoU13.31-201ENST00000607291 104 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 7SK.8-201ENST00000612110 250 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 7SK.11-201ENST00000615477 250 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.59□□□□□ -2.31
UBBP0CG47 7SK.13-201ENST00000622040 250 ntBASIC0.59□□□□□ -2.31
UBBP0CG47 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.58□□□□□ -2.32
UBBP0CG47 RNU2-7P-201ENST00000410794 178 ntBASIC0.58□□□□□ -2.32
UBBP0CG47 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.58□□□□□ -2.32
UBBP0CG47 C1DP2-201ENST00000418167 426 ntBASIC0.58□□□□□ -2.32
UBBP0CG47 AC073910.1-201ENST00000445047 438 ntBASIC0.58□□□□□ -2.32
UBBP0CG47 AC007395.1-201ENST00000451333 677 ntBASIC0.58□□□□□ -2.32
UBBP0CG47 MTCYBP1-201ENST00000454315 1119 ntBASIC0.58□□□□□ -2.32
UBBP0CG47 RNU7-14P-201ENST00000459331 62 ntBASIC0.58□□□□□ -2.32
UBBP0CG47 AC034244.1-201ENST00000507687 207 ntBASIC0.58□□□□□ -2.32
UBBP0CG47 AC067942.3-201ENST00000512025 362 ntBASIC0.58□□□□□ -2.32
UBBP0CG47 AC074344.1-201ENST00000512823 224 ntBASIC0.58□□□□□ -2.32
UBBP0CG47 LRRC34P2-201ENST00000514850 553 ntBASIC0.58□□□□□ -2.32
UBBP0CG47 RNU6-1041P-201ENST00000516254 102 ntBASIC0.58□□□□□ -2.32
UBBP0CG47 RNA5SP503-201ENST00000517047 117 ntBASIC0.58□□□□□ -2.32
UBBP0CG47 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.58□□□□□ -2.32
UBBP0CG47 EIF4A1P12-201ENST00000551910 141 ntBASIC0.58□□□□□ -2.32
UBBP0CG47 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.58□□□□□ -2.32
UBBP0CG47 AC091304.9-201ENST00000612091 226 ntBASIC0.58□□□□□ -2.32
UBBP0CG47 AC138649.3-201ENST00000622154 254 ntBASIC0.58□□□□□ -2.32
UBBP0CG47 MIR338-201ENST00000636369 67 ntBASIC0.58□□□□□ -2.32
UBBP0CG47 AC068647.2-201ENST00000637380 353 ntBASIC0.58□□□□□ -2.32
UBBP0CG47 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
UBBP0CG47 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
UBBP0CG47 AC092268.1-201ENST00000342691 405 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 RNU6-179P-201ENST00000363350 107 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 RNU6-715P-201ENST00000365204 103 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 RNU6-169P-201ENST00000365336 107 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 RNU6-438P-201ENST00000365561 103 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 SNORA18.2-201ENST00000383865 132 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 SNORA36A-201ENST00000384221 132 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 SNORA12.1-201ENST00000390873 148 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 RNU6-550P-201ENST00000391057 101 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 RNA5SP111-201ENST00000411386 101 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.57□□□□□ -2.32
UBBP0CG47 AL365184.2-201ENST00000431139 435 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 AC119618.1-201ENST00000434191 222 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 AC069257.2-201ENST00000441819 155 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 AL009048.1-201ENST00000450437 298 ntBASIC0.57□□□□□ -2.32
UBBP0CG47 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms