Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 RPL30P1-201ENST00000488676 339 ntBASIC2.52□□□□□ -2.01
MMP2P08253 AC015911.1-201ENST00000495111 156 ntBASIC2.52□□□□□ -2.01
MMP2P08253 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.52□□□□□ -2.01
MMP2P08253 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.52□□□□□ -2.01
MMP2P08253 RNU5F-2P-201ENST00000516066 82 ntBASIC2.52□□□□□ -2.01
MMP2P08253 RNA5SP148-201ENST00000516527 94 ntBASIC2.52□□□□□ -2.01
MMP2P08253 RNA5SP384-201ENST00000516615 116 ntBASIC2.52□□□□□ -2.01
MMP2P08253 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.52□□□□□ -2.01
MMP2P08253 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.52□□□□□ -2.01
MMP2P08253 MRPS36P4-201ENST00000534436 298 ntBASIC2.52□□□□□ -2.01
MMP2P08253 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.52□□□□□ -2.01
MMP2P08253 MIR5571-201ENST00000577998 113 ntBASIC2.52□□□□□ -2.01
MMP2P08253 MIR4446-201ENST00000578505 67 ntBASIC2.52□□□□□ -2.01
MMP2P08253 MIR3162-201ENST00000581818 82 ntBASIC2.52□□□□□ -2.01
MMP2P08253 RPL30P11-203ENST00000598995 310 ntBASIC2.52□□□□□ -2.01
MMP2P08253 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.51□□□□□ -2.01
MMP2P08253 MTND5P9-201ENST00000503854 1755 ntBASIC2.51□□□□□ -2.01
MMP2P08253 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
MMP2P08253 AC233981.2-201ENST00000611524 1614 ntBASIC2.51□□□□□ -2.01
MMP2P08253 RNU6-142P-201ENST00000384019 107 ntBASIC2.51□□□□□ -2.01
MMP2P08253 RNU6-968P-201ENST00000384076 107 ntBASIC2.51□□□□□ -2.01
MMP2P08253 SNORA36A-201ENST00000384221 132 ntBASIC2.51□□□□□ -2.01
MMP2P08253 Y_RNA.533-201ENST00000384596 114 ntBASIC2.51□□□□□ -2.01
MMP2P08253 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
MMP2P08253 MTCYBP4-201ENST00000401524 249 ntBASIC2.51□□□□□ -2.01
MMP2P08253 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.51□□□□□ -2.01
MMP2P08253 AC009963.1-201ENST00000417265 157 ntBASIC2.51□□□□□ -2.01
MMP2P08253 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.51□□□□□ -2.01
MMP2P08253 SUMO1P4-201ENST00000429430 302 ntBASIC2.51□□□□□ -2.01
MMP2P08253 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.51□□□□□ -2.01
MMP2P08253 UBE2V1P7-201ENST00000446395 340 ntBASIC2.51□□□□□ -2.01
MMP2P08253 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.51□□□□□ -2.01
MMP2P08253 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.51□□□□□ -2.01
MMP2P08253 UBE2DNL-203ENST00000474922 222 ntBASIC2.51□□□□□ -2.01
MMP2P08253 RPS27AP9-201ENST00000477681 438 ntBASIC2.51□□□□□ -2.01
MMP2P08253 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.51□□□□□ -2.01
MMP2P08253 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.51□□□□□ -2.01
MMP2P08253 AC005741.1-201ENST00000511094 432 ntBASIC2.51□□□□□ -2.01
MMP2P08253 SCARNA16.2-201ENST00000516520 172 ntBASIC2.51□□□□□ -2.01
MMP2P08253 SNORA31.16-201ENST00000516773 139 ntBASIC2.51□□□□□ -2.01
MMP2P08253 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.51□□□□□ -2.01
MMP2P08253 AC027176.1-201ENST00000560204 514 ntBASIC2.51□□□□□ -2.01
MMP2P08253 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.51□□□□□ -2.01
MMP2P08253 AC105245.1-201ENST00000581934 244 ntBASIC2.51□□□□□ -2.01
MMP2P08253 MIR4658-201ENST00000584344 65 ntBASIC2.51□□□□□ -2.01
MMP2P08253 MIR4298-201ENST00000584380 73 ntBASIC2.51□□□□□ -2.01
MMP2P08253 AC060766.3-201ENST00000591442 263 ntBASIC2.51□□□□□ -2.01
MMP2P08253 AL050343.2-201ENST00000607338 280 ntBASIC2.51□□□□□ -2.01
MMP2P08253 AC069294.1-201ENST00000608397 350 ntBASIC2.51□□□□□ -2.01
MMP2P08253 AC009318.2-201ENST00000610917 651 ntBASIC2.51□□□□□ -2.01
MMP2P08253 AC126177.8-201ENST00000618339 1015 ntBASIC2.51□□□□□ -2.01
MMP2P08253 SNORD98-201ENST00000636377 67 ntBASIC2.51□□□□□ -2.01
MMP2P08253 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
MMP2P08253 SNORA38-201ENST00000363946 132 ntBASIC2.5□□□□□ -2.01
MMP2P08253 Y_RNA.813-201ENST00000364639 102 ntBASIC2.5□□□□□ -2.01
MMP2P08253 RNU6-1286P-201ENST00000383871 107 ntBASIC2.5□□□□□ -2.01
MMP2P08253 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.5□□□□□ -2.01
MMP2P08253 AC007064.1-201ENST00000412238 351 ntBASIC2.5□□□□□ -2.01
MMP2P08253 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.5□□□□□ -2.01
MMP2P08253 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.5□□□□□ -2.01
MMP2P08253 RPL23AP50-201ENST00000434149 455 ntBASIC2.5□□□□□ -2.01
MMP2P08253 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.5□□□□□ -2.01
MMP2P08253 AC079354.2-201ENST00000453523 154 ntBASIC2.5□□□□□ -2.01
MMP2P08253 MTCO3P10-201ENST00000455912 772 ntBASIC2.5□□□□□ -2.01
MMP2P08253 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.5□□□□□ -2.01
MMP2P08253 AC097473.1-201ENST00000508142 408 ntBASIC2.5□□□□□ -2.01
MMP2P08253 RNU1-104P-201ENST00000517280 175 ntBASIC2.5□□□□□ -2.01
MMP2P08253 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.5□□□□□ -2.01
MMP2P08253 CBX3P8-201ENST00000532412 525 ntBASIC2.5□□□□□ -2.01
MMP2P08253 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.5□□□□□ -2.01
MMP2P08253 AC021231.3-201ENST00000558497 370 ntBASIC2.5□□□□□ -2.01
MMP2P08253 MIR3136-201ENST00000583498 78 ntBASIC2.5□□□□□ -2.01
MMP2P08253 AL158827.2-201ENST00000602494 330 ntBASIC2.5□□□□□ -2.01
MMP2P08253 RPL12P50-201ENST00000603116 116 ntBASIC2.5□□□□□ -2.01
MMP2P08253 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.5□□□□□ -2.01
MMP2P08253 AC006023.1-201ENST00000603944 259 ntBASIC2.5□□□□□ -2.01
MMP2P08253 AL691447.3-201ENST00000635020 330 ntBASIC2.5□□□□□ -2.01
MMP2P08253 AC069528.2-201ENST00000624849 1991 ntBASIC2.5□□□□□ -2.01
MMP2P08253 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
MMP2P08253 AP000560.1-201ENST00000624150 1937 ntBASIC2.5□□□□□ -2.01
MMP2P08253 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.5□□□□□ -2.01
MMP2P08253 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
MMP2P08253 snoU2_19.1-201ENST00000362361 80 ntBASIC2.49□□□□□ -2.01
MMP2P08253 Y_RNA.394-201ENST00000383942 103 ntBASIC2.49□□□□□ -2.01
MMP2P08253 SNORA29-201ENST00000384183 140 ntBASIC2.49□□□□□ -2.01
MMP2P08253 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
MMP2P08253 CBX3P9-201ENST00000402326 552 ntBASIC2.49□□□□□ -2.01
MMP2P08253 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.49□□□□□ -2.01
MMP2P08253 AL353705.4-201ENST00000449661 238 ntBASIC2.49□□□□□ -2.01
MMP2P08253 AL513124.1-201ENST00000450410 614 ntBASIC2.49□□□□□ -2.01
MMP2P08253 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.49□□□□□ -2.01
MMP2P08253 HMGB1P35-201ENST00000503360 598 ntBASIC2.49□□□□□ -2.01
MMP2P08253 AC022447.4-201ENST00000504053 364 ntBASIC2.49□□□□□ -2.01
MMP2P08253 AC093249.1-201ENST00000567049 203 ntBASIC2.49□□□□□ -2.01
MMP2P08253 MIR5696-201ENST00000578474 85 ntBASIC2.49□□□□□ -2.01
MMP2P08253 MIR4672-201ENST00000583126 81 ntBASIC2.49□□□□□ -2.01
MMP2P08253 AC005899.2-201ENST00000584353 90 ntBASIC2.49□□□□□ -2.01
MMP2P08253 AL078605.1-201ENST00000603529 500 ntBASIC2.49□□□□□ -2.01
MMP2P08253 U4.3-201ENST00000621047 82 ntBASIC2.49□□□□□ -2.01
MMP2P08253 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms