Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MIR561-201ENST00000385216 97 ntBASIC2.42□□□□□ -2.02
RB1P06400 HMGB3P2-201ENST00000411913 584 ntBASIC2.42□□□□□ -2.02
RB1P06400 AL590556.1-201ENST00000423231 483 ntBASIC2.42□□□□□ -2.02
RB1P06400 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.42□□□□□ -2.02
RB1P06400 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RB1P06400 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.42□□□□□ -2.02
RB1P06400 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.42□□□□□ -2.02
RB1P06400 RNU7-187P-201ENST00000458985 68 ntBASIC2.42□□□□□ -2.02
RB1P06400 AC068781.1-201ENST00000488231 618 ntBASIC2.42□□□□□ -2.02
RB1P06400 AC107953.1-201ENST00000522216 297 ntBASIC2.42□□□□□ -2.02
RB1P06400 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.42□□□□□ -2.02
RB1P06400 AC007375.1-201ENST00000554513 578 ntBASIC2.42□□□□□ -2.02
RB1P06400 AC009127.3-201ENST00000570531 403 ntBASIC2.42□□□□□ -2.02
RB1P06400 CPDP1-201ENST00000579660 283 ntBASIC2.42□□□□□ -2.02
RB1P06400 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.42□□□□□ -2.02
RB1P06400 AC007336.1-201ENST00000576365 3828 ntBASIC2.42□□□□□ -2.02
RB1P06400 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
RB1P06400 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
RB1P06400 RNU6-944P-201ENST00000364023 107 ntBASIC2.41□□□□□ -2.02
RB1P06400 RNU4-56P-201ENST00000364700 142 ntBASIC2.41□□□□□ -2.02
RB1P06400 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RB1P06400 DEFA7P-201ENST00000382676 285 ntBASIC2.41□□□□□ -2.02
RB1P06400 RNU6-1013P-201ENST00000384180 107 ntBASIC2.41□□□□□ -2.02
RB1P06400 RNU1-148P-201ENST00000384472 162 ntBASIC2.41□□□□□ -2.02
RB1P06400 MIR144-201ENST00000384886 86 ntBASIC2.41□□□□□ -2.02
RB1P06400 MIR221-201ENST00000385135 110 ntBASIC2.41□□□□□ -2.02
RB1P06400 AL356776.1-201ENST00000406574 447 ntBASIC2.41□□□□□ -2.02
RB1P06400 RN7SKP158-201ENST00000410453 326 ntBASIC2.41□□□□□ -2.02
RB1P06400 AL590632.1-201ENST00000424289 371 ntBASIC2.41□□□□□ -2.02
RB1P06400 MTND1P2-201ENST00000430604 821 ntBASIC2.41□□□□□ -2.02
RB1P06400 AC018634.1-201ENST00000437554 401 ntBASIC2.41□□□□□ -2.02
RB1P06400 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.41□□□□□ -2.02
RB1P06400 MTND4LP16-201ENST00000440828 295 ntBASIC2.41□□□□□ -2.02
RB1P06400 GPM6BP3-201ENST00000442797 145 ntBASIC2.41□□□□□ -2.02
RB1P06400 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.41□□□□□ -2.02
RB1P06400 AC021231.3-201ENST00000558497 370 ntBASIC2.41□□□□□ -2.02
RB1P06400 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.41□□□□□ -2.02
RB1P06400 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.41□□□□□ -2.02
RB1P06400 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.41□□□□□ -2.02
RB1P06400 AL133215.3-201ENST00000609801 448 ntBASIC2.41□□□□□ -2.02
RB1P06400 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.41□□□□□ -2.02
RB1P06400 AL450472.1-202ENST00000637286 180 ntBASIC2.41□□□□□ -2.02
RB1P06400 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.02
RB1P06400 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.4□□□□□ -2.02
RB1P06400 AL356292.1-201ENST00000283110 373 ntBASIC2.4□□□□□ -2.03
RB1P06400 RNU4-15P-201ENST00000362613 141 ntBASIC2.4□□□□□ -2.03
RB1P06400 SNORA25B-201ENST00000365507 128 ntBASIC2.4□□□□□ -2.03
RB1P06400 SNORD116-11-201ENST00000383882 92 ntBASIC2.4□□□□□ -2.03
RB1P06400 SNORA6-201ENST00000384033 151 ntBASIC2.4□□□□□ -2.03
RB1P06400 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
RB1P06400 SNORA11.4-201ENST00000408823 129 ntBASIC2.4□□□□□ -2.03
RB1P06400 RPS15AP28-201ENST00000435088 386 ntBASIC2.4□□□□□ -2.03
RB1P06400 MTND1P11-201ENST00000456661 876 ntBASIC2.4□□□□□ -2.03
RB1P06400 AC130509.1-201ENST00000464158 433 ntBASIC2.4□□□□□ -2.03
RB1P06400 AC018868.1-201ENST00000491307 315 ntBASIC2.4□□□□□ -2.03
RB1P06400 AC104564.1-201ENST00000493028 407 ntBASIC2.4□□□□□ -2.03
RB1P06400 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.4□□□□□ -2.03
RB1P06400 SNORA31.11-201ENST00000516528 139 ntBASIC2.4□□□□□ -2.03
RB1P06400 RNU6-273P-201ENST00000516937 96 ntBASIC2.4□□□□□ -2.03
RB1P06400 IGLV3-17-201ENST00000519099 244 ntBASIC2.4□□□□□ -2.03
RB1P06400 AC018630.3-201ENST00000542637 96 ntBASIC2.4□□□□□ -2.03
RB1P06400 AC121758.2-201ENST00000553271 193 ntBASIC2.4□□□□□ -2.03
RB1P06400 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.4□□□□□ -2.03
RB1P06400 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.4□□□□□ -2.03
RB1P06400 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.4□□□□□ -2.03
RB1P06400 AC078795.3-201ENST00000602913 472 ntBASIC2.4□□□□□ -2.03
RB1P06400 SNORD14A-201ENST00000606526 91 ntBASIC2.4□□□□□ -2.03
RB1P06400 AC009248.2-201ENST00000619826 254 ntBASIC2.4□□□□□ -2.03
RB1P06400 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.4□□□□□ -2.03
RB1P06400 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
RB1P06400 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
RB1P06400 Y_RNA.72-201ENST00000362894 103 ntBASIC2.39□□□□□ -2.03
RB1P06400 RNU6-1159P-201ENST00000362933 107 ntBASIC2.39□□□□□ -2.03
RB1P06400 MIR521-1-201ENST00000384902 87 ntBASIC2.39□□□□□ -2.03
RB1P06400 SNORA26.9-201ENST00000391322 122 ntBASIC2.39□□□□□ -2.03
RB1P06400 Y_RNA.597-201ENST00000410463 100 ntBASIC2.39□□□□□ -2.03
RB1P06400 RNU2-32P-201ENST00000411193 191 ntBASIC2.39□□□□□ -2.03
RB1P06400 EIF1AXP1-201ENST00000419267 435 ntBASIC2.39□□□□□ -2.03
RB1P06400 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.39□□□□□ -2.03
RB1P06400 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.39□□□□□ -2.03
RB1P06400 AC145146.1-201ENST00000496370 254 ntBASIC2.39□□□□□ -2.03
RB1P06400 AC018710.1-201ENST00000506509 158 ntBASIC2.39□□□□□ -2.03
RB1P06400 RNU4-49P-201ENST00000516080 140 ntBASIC2.39□□□□□ -2.03
RB1P06400 RNA5SP200-201ENST00000516360 103 ntBASIC2.39□□□□□ -2.03
RB1P06400 RNU6-567P-201ENST00000516746 107 ntBASIC2.39□□□□□ -2.03
RB1P06400 AC087241.2-201ENST00000535801 324 ntBASIC2.39□□□□□ -2.03
RB1P06400 AC016256.1-201ENST00000547971 354 ntBASIC2.39□□□□□ -2.03
RB1P06400 AL078605.1-201ENST00000603529 500 ntBASIC2.39□□□□□ -2.03
RB1P06400 MIR8076-201ENST00000611401 83 ntBASIC2.39□□□□□ -2.03
RB1P06400 AC063943.3-201ENST00000615562 356 ntBASIC2.39□□□□□ -2.03
RB1P06400 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RB1P06400 Y_RNA.151-201ENST00000363566 112 ntBASIC2.38□□□□□ -2.03
RB1P06400 RNU6-546P-201ENST00000383991 107 ntBASIC2.38□□□□□ -2.03
RB1P06400 SNORA46.1-201ENST00000391069 153 ntBASIC2.38□□□□□ -2.03
RB1P06400 RNU6-510P-201ENST00000391239 108 ntBASIC2.38□□□□□ -2.03
RB1P06400 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.38□□□□□ -2.03
RB1P06400 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.38□□□□□ -2.03
RB1P06400 AC007677.1-201ENST00000445757 515 ntBASIC2.38□□□□□ -2.03
RB1P06400 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.38□□□□□ -2.03
RB1P06400 PTP4A1P4-201ENST00000512479 322 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms