Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.55□□□□□ -1.84
CHGBP05060 CUL1P1-201ENST00000509510 2425 ntBASIC3.55□□□□□ -1.84
CHGBP05060 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CHGBP05060 Y_RNA.20-201ENST00000362479 113 ntBASIC3.55□□□□□ -1.84
CHGBP05060 SNORD56.1-201ENST00000362913 68 ntBASIC3.55□□□□□ -1.84
CHGBP05060 Y_RNA.518-201ENST00000384552 113 ntBASIC3.55□□□□□ -1.84
CHGBP05060 Y_RNA.541-201ENST00000384640 113 ntBASIC3.55□□□□□ -1.84
CHGBP05060 RNU6-1077P-201ENST00000410506 102 ntBASIC3.55□□□□□ -1.84
CHGBP05060 AC139712.2-201ENST00000424302 339 ntBASIC3.55□□□□□ -1.84
CHGBP05060 AC025750.2-201ENST00000442609 450 ntBASIC3.55□□□□□ -1.84
CHGBP05060 AL031659.1-201ENST00000447075 539 ntBASIC3.55□□□□□ -1.84
CHGBP05060 AP001486.1-201ENST00000463339 476 ntBASIC3.55□□□□□ -1.84
CHGBP05060 RN7SKP132-201ENST00000516001 208 ntBASIC3.55□□□□□ -1.84
CHGBP05060 RNU6-1338P-201ENST00000516328 91 ntBASIC3.55□□□□□ -1.84
CHGBP05060 RNU6-182P-201ENST00000516970 105 ntBASIC3.55□□□□□ -1.84
CHGBP05060 AC026470.2-201ENST00000561492 181 ntBASIC3.55□□□□□ -1.84
CHGBP05060 AC130289.1-201ENST00000577321 73 ntBASIC3.55□□□□□ -1.84
CHGBP05060 AC006111.3-201ENST00000622137 383 ntBASIC3.55□□□□□ -1.84
CHGBP05060 AL137790.1-201ENST00000634283 177 ntBASIC3.55□□□□□ -1.84
CHGBP05060 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHGBP05060 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHGBP05060 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHGBP05060 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CHGBP05060 RNU6-1266P-201ENST00000362794 105 ntBASIC3.54□□□□□ -1.84
CHGBP05060 RNA5SP383-201ENST00000362934 120 ntBASIC3.54□□□□□ -1.84
CHGBP05060 SNORD113-8-201ENST00000363497 74 ntBASIC3.54□□□□□ -1.84
CHGBP05060 SNORD78.2-201ENST00000391076 69 ntBASIC3.54□□□□□ -1.84
CHGBP05060 RPS4XP3-201ENST00000398541 413 ntBASIC3.54□□□□□ -1.84
CHGBP05060 RNA5SP38-201ENST00000410750 119 ntBASIC3.54□□□□□ -1.84
CHGBP05060 RNU2-14P-201ENST00000411053 191 ntBASIC3.54□□□□□ -1.84
CHGBP05060 EEF1A1P41-201ENST00000414667 207 ntBASIC3.54□□□□□ -1.84
CHGBP05060 AC243964.1-201ENST00000441814 261 ntBASIC3.54□□□□□ -1.84
CHGBP05060 AL135938.1-201ENST00000443141 297 ntBASIC3.54□□□□□ -1.84
CHGBP05060 AC006026.2-201ENST00000457376 180 ntBASIC3.54□□□□□ -1.84
CHGBP05060 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.54□□□□□ -1.84
CHGBP05060 RNU6-703P-201ENST00000516946 107 ntBASIC3.54□□□□□ -1.84
CHGBP05060 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.54□□□□□ -1.84
CHGBP05060 AC068657.1-201ENST00000520807 306 ntBASIC3.54□□□□□ -1.84
CHGBP05060 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.54□□□□□ -1.84
CHGBP05060 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.54□□□□□ -1.84
CHGBP05060 AC024153.1-201ENST00000603103 365 ntBASIC3.54□□□□□ -1.84
CHGBP05060 AC099778.2-201ENST00000610904 211 ntBASIC3.54□□□□□ -1.84
CHGBP05060 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.54□□□□□ -1.84
CHGBP05060 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CHGBP05060 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.54□□□□□ -1.84
CHGBP05060 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.54□□□□□ -1.84
CHGBP05060 GABRG2-229ENST00000641017 3628 ntBASIC3.54□□□□□ -1.84
CHGBP05060 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.54□□□□□ -1.84
CHGBP05060 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.53□□□□□ -1.84
CHGBP05060 RNU6-1301P-201ENST00000362724 104 ntBASIC3.53□□□□□ -1.84
CHGBP05060 SNORA80A-201ENST00000363922 136 ntBASIC3.53□□□□□ -1.84
CHGBP05060 RNU6-280P-201ENST00000364145 104 ntBASIC3.53□□□□□ -1.84
CHGBP05060 RNU1-73P-201ENST00000383971 164 ntBASIC3.53□□□□□ -1.84
CHGBP05060 RNU6-102P-201ENST00000384485 104 ntBASIC3.53□□□□□ -1.84
CHGBP05060 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.53□□□□□ -1.84
CHGBP05060 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.53□□□□□ -1.84
CHGBP05060 AC098831.1-201ENST00000440661 216 ntBASIC3.53□□□□□ -1.84
CHGBP05060 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.53□□□□□ -1.84
CHGBP05060 AL049873.1-201ENST00000480540 376 ntBASIC3.53□□□□□ -1.84
CHGBP05060 RPS29P20-201ENST00000489592 171 ntBASIC3.53□□□□□ -1.84
CHGBP05060 AC092185.1-201ENST00000491371 97 ntBASIC3.53□□□□□ -1.84
CHGBP05060 AF186996.7-201ENST00000492781 209 ntBASIC3.53□□□□□ -1.84
CHGBP05060 RPL30P5-201ENST00000494923 336 ntBASIC3.53□□□□□ -1.84
CHGBP05060 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.53□□□□□ -1.84
CHGBP05060 MIR2355-201ENST00000517199 87 ntBASIC3.53□□□□□ -1.84
CHGBP05060 RNU6-711P-201ENST00000517255 106 ntBASIC3.53□□□□□ -1.84
CHGBP05060 AC098479.1-201ENST00000609225 154 ntBASIC3.53□□□□□ -1.84
CHGBP05060 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.53□□□□□ -1.84
CHGBP05060 SCARNA4-201ENST00000629045 128 ntBASIC3.53□□□□□ -1.84
CHGBP05060 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CHGBP05060 AL079305.1-201ENST00000623159 3008 ntBASIC3.53□□□□□ -1.84
CHGBP05060 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.53□□□□□ -1.84
CHGBP05060 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CHGBP05060 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CHGBP05060 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CHGBP05060 RNU6-942P-201ENST00000363002 107 ntBASIC3.52□□□□□ -1.85
CHGBP05060 Y_RNA.150-201ENST00000363562 102 ntBASIC3.52□□□□□ -1.85
CHGBP05060 Y_RNA.269-201ENST00000364685 89 ntBASIC3.52□□□□□ -1.85
CHGBP05060 Y_RNA.274-201ENST00000364714 101 ntBASIC3.52□□□□□ -1.85
CHGBP05060 Y_RNA.297-201ENST00000364950 91 ntBASIC3.52□□□□□ -1.85
CHGBP05060 Y_RNA.352-201ENST00000365439 102 ntBASIC3.52□□□□□ -1.85
CHGBP05060 RNU6-1062P-201ENST00000383908 107 ntBASIC3.52□□□□□ -1.85
CHGBP05060 RNU6-217P-201ENST00000384164 104 ntBASIC3.52□□□□□ -1.85
CHGBP05060 Y_RNA.504-201ENST00000384481 104 ntBASIC3.52□□□□□ -1.85
CHGBP05060 RNU6-541P-201ENST00000384709 110 ntBASIC3.52□□□□□ -1.85
CHGBP05060 MIR518D-201ENST00000385014 87 ntBASIC3.52□□□□□ -1.85
CHGBP05060 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.52□□□□□ -1.85
CHGBP05060 AC087477.1-201ENST00000465747 340 ntBASIC3.52□□□□□ -1.85
CHGBP05060 AP000870.1-201ENST00000472927 406 ntBASIC3.52□□□□□ -1.85
CHGBP05060 RNU6-1012P-201ENST00000516606 109 ntBASIC3.52□□□□□ -1.85
CHGBP05060 RNU6-928P-201ENST00000516876 104 ntBASIC3.52□□□□□ -1.85
CHGBP05060 RNA5SP380-201ENST00000517190 98 ntBASIC3.52□□□□□ -1.85
CHGBP05060 SNORA81.3-201ENST00000517283 198 ntBASIC3.52□□□□□ -1.85
CHGBP05060 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.52□□□□□ -1.85
CHGBP05060 AC009779.6-201ENST00000603972 165 ntBASIC3.52□□□□□ -1.85
CHGBP05060 RPL23AP88-201ENST00000605759 454 ntBASIC3.52□□□□□ -1.85
CHGBP05060 MIR6076-201ENST00000617521 113 ntBASIC3.52□□□□□ -1.85
CHGBP05060 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.52□□□□□ -1.85
CHGBP05060 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.52□□□□□ -1.85
CHGBP05060 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms