Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.35□□□□□ -2.19
CD74P04233 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.35□□□□□ -2.19
CD74P04233 BNIP3P16-201ENST00000589779 534 ntBASIC1.35□□□□□ -2.19
CD74P04233 AP001596.2-201ENST00000608410 312 ntBASIC1.35□□□□□ -2.19
CD74P04233 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CD74P04233 HULC.1-201ENST00000612720 240 ntBASIC1.35□□□□□ -2.19
CD74P04233 Y_RNA.255-201ENST00000364581 97 ntBASIC1.34□□□□□ -2.19
CD74P04233 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CD74P04233 SNORD14D-201ENST00000384390 87 ntBASIC1.34□□□□□ -2.19
CD74P04233 MIR597-201ENST00000384968 97 ntBASIC1.34□□□□□ -2.19
CD74P04233 RNU11-3P-201ENST00000391111 133 ntBASIC1.34□□□□□ -2.19
CD74P04233 MIR1283-2-201ENST00000408621 87 ntBASIC1.34□□□□□ -2.19
CD74P04233 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.34□□□□□ -2.19
CD74P04233 VN1R108P-201ENST00000431580 830 ntBASIC1.34□□□□□ -2.19
CD74P04233 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.34□□□□□ -2.19
CD74P04233 AC013470.1-201ENST00000453438 462 ntBASIC1.34□□□□□ -2.19
CD74P04233 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.34□□□□□ -2.19
CD74P04233 AC093259.1-201ENST00000509755 300 ntBASIC1.34□□□□□ -2.19
CD74P04233 AC091874.1-201ENST00000511402 339 ntBASIC1.34□□□□□ -2.19
CD74P04233 RPL39P5-202ENST00000512505 151 ntBASIC1.34□□□□□ -2.19
CD74P04233 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.34□□□□□ -2.19
CD74P04233 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.34□□□□□ -2.19
CD74P04233 AC016925.2-201ENST00000605108 242 ntBASIC1.34□□□□□ -2.19
CD74P04233 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.33□□□□□ -2.2
CD74P04233 AP000648.3-201ENST00000623539 4507 ntBASIC1.33□□□□□ -2.2
CD74P04233 Y_RNA.51-201ENST00000362725 102 ntBASIC1.33□□□□□ -2.2
CD74P04233 RNU6-1141P-201ENST00000364520 107 ntBASIC1.33□□□□□ -2.2
CD74P04233 RNU6-1042P-201ENST00000384204 107 ntBASIC1.33□□□□□ -2.2
CD74P04233 Y_RNA.504-201ENST00000384481 104 ntBASIC1.33□□□□□ -2.2
CD74P04233 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
CD74P04233 AL663109.1-201ENST00000411498 844 ntBASIC1.33□□□□□ -2.2
CD74P04233 SRIP3-201ENST00000413200 219 ntBASIC1.33□□□□□ -2.2
CD74P04233 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.33□□□□□ -2.2
CD74P04233 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.33□□□□□ -2.2
CD74P04233 SNAP23P1-201ENST00000433229 246 ntBASIC1.33□□□□□ -2.2
CD74P04233 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.33□□□□□ -2.2
CD74P04233 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.33□□□□□ -2.2
CD74P04233 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.33□□□□□ -2.2
CD74P04233 MTCO3P38-201ENST00000468910 766 ntBASIC1.33□□□□□ -2.2
CD74P04233 FO393415.2-201ENST00000480085 343 ntBASIC1.33□□□□□ -2.2
CD74P04233 AC079140.5-201ENST00000507882 310 ntBASIC1.33□□□□□ -2.2
CD74P04233 AC091133.4-201ENST00000511142 308 ntBASIC1.33□□□□□ -2.2
CD74P04233 RNA5SP401-201ENST00000515920 127 ntBASIC1.33□□□□□ -2.2
CD74P04233 RNA5SP458-201ENST00000516188 119 ntBASIC1.33□□□□□ -2.2
CD74P04233 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.33□□□□□ -2.2
CD74P04233 AK6P1-201ENST00000540219 478 ntBASIC1.33□□□□□ -2.2
CD74P04233 AC018630.3-201ENST00000542637 96 ntBASIC1.33□□□□□ -2.2
CD74P04233 AC109446.1-201ENST00000566172 220 ntBASIC1.33□□□□□ -2.2
CD74P04233 MIR4255-201ENST00000579351 72 ntBASIC1.33□□□□□ -2.2
CD74P04233 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.33□□□□□ -2.2
CD74P04233 VN1R80P-201ENST00000597126 338 ntBASIC1.33□□□□□ -2.2
CD74P04233 AC018889.1-201ENST00000605372 397 ntBASIC1.33□□□□□ -2.2
CD74P04233 AL158209.2-201ENST00000619266 216 ntBASIC1.33□□□□□ -2.2
CD74P04233 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CD74P04233 MIR6863-201ENST00000636112 90 ntBASIC1.33□□□□□ -2.2
CD74P04233 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CD74P04233 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CD74P04233 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CD74P04233 RNU6-1164P-201ENST00000364428 107 ntBASIC1.32□□□□□ -2.2
CD74P04233 SNORD32A-201ENST00000364805 84 ntBASIC1.32□□□□□ -2.2
CD74P04233 RNU4-66P-201ENST00000365199 138 ntBASIC1.32□□□□□ -2.2
CD74P04233 RPS29P13-201ENST00000402041 169 ntBASIC1.32□□□□□ -2.2
CD74P04233 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.32□□□□□ -2.2
CD74P04233 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.32□□□□□ -2.2
CD74P04233 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.32□□□□□ -2.2
CD74P04233 CBX3P6-201ENST00000430257 527 ntBASIC1.32□□□□□ -2.2
CD74P04233 USP9YP14-201ENST00000430663 563 ntBASIC1.32□□□□□ -2.2
CD74P04233 MTCO2P18-201ENST00000457151 658 ntBASIC1.32□□□□□ -2.2
CD74P04233 TPTE2P5-203ENST00000458118 728 ntBASIC1.32□□□□□ -2.2
CD74P04233 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.32□□□□□ -2.2
CD74P04233 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.32□□□□□ -2.2
CD74P04233 COPS8P3-201ENST00000526024 482 ntBASIC1.32□□□□□ -2.2
CD74P04233 AC090115.3-201ENST00000553218 849 ntBASIC1.32□□□□□ -2.2
CD74P04233 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.32□□□□□ -2.2
CD74P04233 AC078795.3-201ENST00000602913 472 ntBASIC1.32□□□□□ -2.2
CD74P04233 Z99129.1-201ENST00000612510 255 ntBASIC1.32□□□□□ -2.2
CD74P04233 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.32□□□□□ -2.2
CD74P04233 MTND5P26-201ENST00000426018 1752 ntBASIC1.31□□□□□ -2.2
CD74P04233 AC245060.5-201ENST00000610778 3293 ntBASIC1.31□□□□□ -2.2
CD74P04233 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CD74P04233 RNU4-56P-201ENST00000364700 142 ntBASIC1.31□□□□□ -2.2
CD74P04233 RNU6-142P-201ENST00000384019 107 ntBASIC1.31□□□□□ -2.2
CD74P04233 SNORA36A-201ENST00000384221 132 ntBASIC1.31□□□□□ -2.2
CD74P04233 RN7SKP51-201ENST00000410781 304 ntBASIC1.31□□□□□ -2.2
CD74P04233 CYCSP49-201ENST00000420810 319 ntBASIC1.31□□□□□ -2.2
CD74P04233 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.31□□□□□ -2.2
CD74P04233 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.31□□□□□ -2.2
CD74P04233 MTND2P22-201ENST00000444325 1033 ntBASIC1.31□□□□□ -2.2
CD74P04233 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.31□□□□□ -2.2
CD74P04233 AC022447.4-201ENST00000504053 364 ntBASIC1.31□□□□□ -2.2
CD74P04233 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.31□□□□□ -2.2
CD74P04233 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.31□□□□□ -2.2
CD74P04233 SNORA14.1-201ENST00000516113 141 ntBASIC1.31□□□□□ -2.2
CD74P04233 SNORA40.12-201ENST00000516329 111 ntBASIC1.31□□□□□ -2.2
CD74P04233 RNU6-405P-201ENST00000516637 110 ntBASIC1.31□□□□□ -2.2
CD74P04233 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.31□□□□□ -2.2
CD74P04233 MIR3941-201ENST00000582572 103 ntBASIC1.31□□□□□ -2.2
CD74P04233 PIGPP4-201ENST00000584447 307 ntBASIC1.31□□□□□ -2.2
CD74P04233 AC087683.1-201ENST00000591187 441 ntBASIC1.31□□□□□ -2.2
CD74P04233 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms