Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RNU6-586P-201ENST00000517265 104 ntBASIC2.01□□□□□ -2.09
MT-ND1P03886 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.01□□□□□ -2.09
MT-ND1P03886 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.01□□□□□ -2.09
MT-ND1P03886 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.01□□□□□ -2.09
MT-ND1P03886 AC074050.1-201ENST00000563247 211 ntBASIC2.01□□□□□ -2.09
MT-ND1P03886 MIR3976-201ENST00000606807 139 ntBASIC2.01□□□□□ -2.09
MT-ND1P03886 AC243829.7-201ENST00000633081 225 ntBASIC2.01□□□□□ -2.09
MT-ND1P03886 AL136360.1-201ENST00000503377 1900 ntBASIC2.01□□□□□ -2.09
MT-ND1P03886 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
MT-ND1P03886 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2□□□□□ -2.09
MT-ND1P03886 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
MT-ND1P03886 RNU4-52P-201ENST00000384209 138 ntBASIC2□□□□□ -2.09
MT-ND1P03886 RNU6-306P-201ENST00000384617 107 ntBASIC2□□□□□ -2.09
MT-ND1P03886 SNORA48.3-201ENST00000391081 134 ntBASIC2□□□□□ -2.09
MT-ND1P03886 AL356432.1-201ENST00000405809 419 ntBASIC2□□□□□ -2.09
MT-ND1P03886 MIR548F5-201ENST00000408421 86 ntBASIC2□□□□□ -2.09
MT-ND1P03886 RNU4-14P-201ENST00000410858 122 ntBASIC2□□□□□ -2.09
MT-ND1P03886 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2□□□□□ -2.09
MT-ND1P03886 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2□□□□□ -2.09
MT-ND1P03886 AC025033.1-201ENST00000463883 194 ntBASIC2□□□□□ -2.09
MT-ND1P03886 SNRPGP7-201ENST00000469016 106 ntBASIC2□□□□□ -2.09
MT-ND1P03886 MTCO1P29-201ENST00000496868 288 ntBASIC2□□□□□ -2.09
MT-ND1P03886 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2□□□□□ -2.09
MT-ND1P03886 RNA5SP200-201ENST00000516360 103 ntBASIC2□□□□□ -2.09
MT-ND1P03886 RNU6-875P-201ENST00000516488 106 ntBASIC2□□□□□ -2.09
MT-ND1P03886 RNA5SP281-201ENST00000516504 135 ntBASIC2□□□□□ -2.09
MT-ND1P03886 MIR4790-201ENST00000577799 79 ntBASIC2□□□□□ -2.09
MT-ND1P03886 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2□□□□□ -2.09
MT-ND1P03886 AC091135.1-201ENST00000585943 307 ntBASIC2□□□□□ -2.09
MT-ND1P03886 UBE2V2P2-201ENST00000587677 504 ntBASIC2□□□□□ -2.09
MT-ND1P03886 AC002984.1-201ENST00000591692 448 ntBASIC2□□□□□ -2.09
MT-ND1P03886 AC009994.1-201ENST00000606889 253 ntBASIC2□□□□□ -2.09
MT-ND1P03886 AL133215.3-201ENST00000609801 448 ntBASIC2□□□□□ -2.09
MT-ND1P03886 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.99□□□□□ -2.09
MT-ND1P03886 U3.13-201ENST00000364804 214 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 RNU6-1222P-201ENST00000384615 107 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 MIR17-201ENST00000385012 84 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 AL591034.2-201ENST00000402839 359 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 AP000275.1-201ENST00000411943 390 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 RPL23AP95-201ENST00000426806 265 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 GPM6BP3-201ENST00000442797 145 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 FTH1P25-201ENST00000447665 469 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.99□□□□□ -2.09
MT-ND1P03886 snoU13.14-201ENST00000459372 104 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 MTND4P17-201ENST00000470444 350 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 AL121594.1-201ENST00000475906 575 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.99□□□□□ -2.09
MT-ND1P03886 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.99□□□□□ -2.09
MT-ND1P03886 AC034114.1-201ENST00000520293 285 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 IMMP1LP2-201ENST00000552954 492 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 AC026271.5-201ENST00000577873 130 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 AL031274.2-201ENST00000599419 203 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.99□□□□□ -2.09
MT-ND1P03886 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 AC104260.1-201ENST00000616660 539 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 MIR6132-201ENST00000622083 109 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 SNORA43.4-201ENST00000629559 138 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 TPTEP1-208ENST00000636884 213 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 AL450472.1-202ENST00000637286 180 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.99□□□□□ -2.09
MT-ND1P03886 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MT-ND1P03886 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MT-ND1P03886 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
MT-ND1P03886 RNU6-212P-201ENST00000362642 104 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 RNU6-1059P-201ENST00000363752 98 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 RNU6-1032P-201ENST00000384100 107 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 Y_RNA.473-201ENST00000384333 102 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 MIR517A-201ENST00000385001 87 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 SNORA40.19-201ENST00000390846 128 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 HMGN2P39-201ENST00000398005 273 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 RNU6-1245P-201ENST00000411130 106 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 RPS3AP52-201ENST00000435639 297 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.98□□□□□ -2.09
MT-ND1P03886 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.98□□□□□ -2.09
MT-ND1P03886 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.98□□□□□ -2.09
MT-ND1P03886 MTND5P20-201ENST00000448677 143 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.98□□□□□ -2.09
MT-ND1P03886 AL353752.1-201ENST00000454946 260 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 RPS27P21-201ENST00000486977 252 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 RNU5F-2P-201ENST00000516066 82 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 Y_RNA.691-201ENST00000516611 103 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 RNU1-40P-201ENST00000516816 164 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 RNU1-97P-201ENST00000516872 164 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 NDUFA5P6-201ENST00000542110 379 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.98□□□□□ -2.09
MT-ND1P03886 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.98□□□□□ -2.09
MT-ND1P03886 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.98□□□□□ -2.09
MT-ND1P03886 AC093249.1-201ENST00000567049 203 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 SNORD53-201ENST00000579969 78 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 AL078605.1-201ENST00000603529 500 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 AL022345.1-201ENST00000607292 135 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 AC007792.1-201ENST00000623023 402 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 AC002543.1-201ENST00000299783 1954 ntBASIC1.98□□□□□ -2.09
MT-ND1P03886 RNA5SP289-201ENST00000362332 137 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 RNU6-655P-201ENST00000362858 107 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 RNU6-227P-201ENST00000362865 103 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 Y_RNA.70-201ENST00000362886 110 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 RNU1-23P-201ENST00000363361 144 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 Y_RNA.142-201ENST00000363491 102 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 RNU6-1141P-201ENST00000364520 107 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms