Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC009032.1-201ENST00000617574 431 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 AC136475.10-201ENST00000620253 385 ntBASIC-0.12□□□□□ -2.43
SPTA1P02549 RNA5SP222-201ENST00000411039 105 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-0.13□□□□□ -2.43
SPTA1P02549 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.13□□□□□ -2.43
SPTA1P02549 AC008628.1-201ENST00000508663 265 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 RNU6-947P-201ENST00000516264 106 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 AL157871.3-201ENST00000557231 293 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 AC136618.2-201ENST00000575091 400 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 MIR3678-201ENST00000578455 94 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.13□□□□□ -2.43
SPTA1P02549 AC025449.1-201ENST00000603896 529 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 AP000943.4-201ENST00000622912 357 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 AC090617.9-201ENST00000623751 147 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 RNU6-252P-201ENST00000363232 107 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 RNU6-674P-201ENST00000363831 107 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 RNU6-891P-201ENST00000384280 111 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 SNORD116-20-201ENST00000384529 92 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 MTCO2P31-201ENST00000402702 684 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 RNU4-63P-201ENST00000411313 118 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 AL592310.1-201ENST00000414330 671 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.13□□□□□ -2.43
SPTA1P02549 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.13□□□□□ -2.43
SPTA1P02549 RPS27AP8-201ENST00000452665 445 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 RNU7-34P-201ENST00000459394 64 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC-0.13□□□□□ -2.43
SPTA1P02549 RNU6-927P-201ENST00000516199 100 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 RNU6-416P-201ENST00000516265 103 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 RNU6-703P-201ENST00000516946 107 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 AC007751.1-201ENST00000529260 376 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
SPTA1P02549 AL353778.1-201ENST00000603149 408 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 AC021506.2-201ENST00000612354 169 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC-0.13□□□□□ -2.43
SPTA1P02549 AL157786.1-207ENST00000627771 695 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 MTND4P5-201ENST00000435821 1374 ntBASIC-0.13□□□□□ -2.43
SPTA1P02549 RNU6-188P-201ENST00000364207 107 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 SNORA63D-201ENST00000364359 132 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 RNA5SP128-201ENST00000365305 116 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.14□□□□□ -2.43
SPTA1P02549 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.14□□□□□ -2.43
SPTA1P02549 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.14□□□□□ -2.43
SPTA1P02549 AC092001.1-201ENST00000453012 261 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 AC114981.1-201ENST00000503897 678 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.14□□□□□ -2.43
SPTA1P02549 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
SPTA1P02549 AC022861.1-201ENST00000522981 663 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 AP000763.2-201ENST00000540641 163 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 AC025423.5-201ENST00000550230 219 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.14□□□□□ -2.43
SPTA1P02549 AC090888.2-201ENST00000559765 1144 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 AC095057.3-201ENST00000567102 1157 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 AL031281.1-201ENST00000604049 488 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 MIR365A-201ENST00000362260 87 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 RNU4-79P-201ENST00000362764 141 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 SMIM11P1-201ENST00000369586 178 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 RNU6-77P-201ENST00000410554 91 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.14□□□□□ -2.43
SPTA1P02549 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.14□□□□□ -2.43
SPTA1P02549 RPL39P6-201ENST00000448289 150 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 LINC01399-202ENST00000458450 244 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 MED28P2-201ENST00000475771 317 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 AC138869.1-201ENST00000568623 124 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.14□□□□□ -2.43
SPTA1P02549 AC011451.2-201ENST00000604303 598 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 RNU6-87P-201ENST00000607561 108 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 AL603839.4-201ENST00000624658 1005 ntBASIC-0.14□□□□□ -2.43
SPTA1P02549 MTND4P21-201ENST00000453886 1357 ntBASIC-0.15□□□□□ -2.43
SPTA1P02549 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.15□□□□□ -2.43
SPTA1P02549 RNU6-929P-201ENST00000384429 107 ntBASIC-0.15□□□□□ -2.43
SPTA1P02549 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.15□□□□□ -2.43
SPTA1P02549 SNORD105-201ENST00000386910 85 ntBASIC-0.15□□□□□ -2.43
SPTA1P02549 RNU4-27P-201ENST00000410889 139 ntBASIC-0.15□□□□□ -2.43
SPTA1P02549 BTF3L4P3-201ENST00000418879 476 ntBASIC-0.15□□□□□ -2.43
SPTA1P02549 U7.7-201ENST00000459276 60 ntBASIC-0.15□□□□□ -2.43
SPTA1P02549 AC091874.1-201ENST00000511402 339 ntBASIC-0.15□□□□□ -2.43
SPTA1P02549 AC093519.1-201ENST00000566109 298 ntBASIC-0.15□□□□□ -2.43
SPTA1P02549 MIR4709-201ENST00000577272 72 ntBASIC-0.15□□□□□ -2.43
SPTA1P02549 AP002906.1-201ENST00000603405 233 ntBASIC-0.15□□□□□ -2.43
SPTA1P02549 AL356157.2-201ENST00000605122 111 ntBASIC-0.15□□□□□ -2.43
SPTA1P02549 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.15□□□□□ -2.43
SPTA1P02549 MTND1P21-201ENST00000412991 285 ntBASIC-0.15□□□□□ -2.43
SPTA1P02549 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.15□□□□□ -2.43
SPTA1P02549 MTND1P28-201ENST00000435623 950 ntBASIC-0.15□□□□□ -2.43
SPTA1P02549 RNU6-863P-201ENST00000515989 104 ntBASIC-0.15□□□□□ -2.43
SPTA1P02549 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.15□□□□□ -2.43
SPTA1P02549 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-0.15□□□□□ -2.43
SPTA1P02549 AL358072.1-201ENST00000604156 575 ntBASIC-0.15□□□□□ -2.43
SPTA1P02549 SUMO2P14-201ENST00000604488 293 ntBASIC-0.15□□□□□ -2.43
SPTA1P02549 AL161798.1-201ENST00000604630 131 ntBASIC-0.15□□□□□ -2.43
SPTA1P02549 RNY4P6-201ENST00000363667 96 ntBASIC-0.16□□□□□ -2.43
SPTA1P02549 SNORA32.1-201ENST00000364514 115 ntBASIC-0.16□□□□□ -2.43
SPTA1P02549 MTCYBP38-201ENST00000417160 1123 ntBASIC-0.16□□□□□ -2.43
SPTA1P02549 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.16□□□□□ -2.43
SPTA1P02549 RAD1P2-201ENST00000446414 663 ntBASIC-0.16□□□□□ -2.43
SPTA1P02549 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.16□□□□□ -2.43
SPTA1P02549 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.16□□□□□ -2.43
SPTA1P02549 AC010469.2-201ENST00000496412 480 ntBASIC-0.16□□□□□ -2.43
SPTA1P02549 RNA5SP227-201ENST00000516184 113 ntBASIC-0.16□□□□□ -2.43
SPTA1P02549 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.16□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 314.4 ms