Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC099654.13-201ENST00000639774 207 ntBASIC0.91□□□□□ -2.26
COL4A1P02462 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.26
COL4A1P02462 snoU2_19.1-201ENST00000362361 80 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 Y_RNA.22-201ENST00000362492 102 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 U3.4-201ENST00000363352 213 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 RNU6-944P-201ENST00000364023 107 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 SNORD115-7-201ENST00000365306 82 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 Y_RNA.480-201ENST00000384364 102 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 MIR936-201ENST00000401264 98 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.9□□□□□ -2.27
COL4A1P02462 AL358176.2-201ENST00000425769 204 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.9□□□□□ -2.27
COL4A1P02462 MED13P1-201ENST00000428342 171 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.9□□□□□ -2.27
COL4A1P02462 AC079781.2-201ENST00000446424 169 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
COL4A1P02462 RNU7-182P-201ENST00000459009 62 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 AC011005.2-201ENST00000487324 359 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.9□□□□□ -2.27
COL4A1P02462 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.9□□□□□ -2.27
COL4A1P02462 AC008834.1-201ENST00000511612 175 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 RNU6-586P-201ENST00000517265 104 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.9□□□□□ -2.27
COL4A1P02462 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.9□□□□□ -2.27
COL4A1P02462 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.9□□□□□ -2.27
COL4A1P02462 AC002400.1-201ENST00000569310 726 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 MIR4528-201ENST00000577763 90 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.9□□□□□ -2.27
COL4A1P02462 CLIC4P2-201ENST00000601934 717 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 AC021646.1-201ENST00000605469 484 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 Z99289.3-201ENST00000605586 594 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 AC022202.1-201ENST00000613515 211 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.9□□□□□ -2.27
COL4A1P02462 AL132822.1-201ENST00000617063 513 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 SEPT14P19-203ENST00000633205 211 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 U6.114-201ENST00000636407 96 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 MIR3529-201ENST00000637713 78 ntBASIC0.9□□□□□ -2.27
COL4A1P02462 HAUS6P2-201ENST00000433254 2404 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
COL4A1P02462 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
COL4A1P02462 RNU6-1010P-201ENST00000362757 107 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 RNU6-1285P-201ENST00000363480 105 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 SNORD114-6-201ENST00000364393 72 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 RNU5E-7P-201ENST00000365290 117 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 RNU6-74P-201ENST00000384235 107 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 RNY3P10-201ENST00000384764 102 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 MIR508-201ENST00000384857 115 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 MIR10A-201ENST00000385043 110 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 HMGN2P39-201ENST00000398005 273 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 CBX3P9-201ENST00000402326 552 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 Y_RNA.597-201ENST00000410463 100 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 RNU6-955P-201ENST00000410497 104 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 EEF1A1P40-201ENST00000412883 573 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.89□□□□□ -2.27
COL4A1P02462 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.89□□□□□ -2.27
COL4A1P02462 GPR143P-201ENST00000434155 205 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.89□□□□□ -2.27
COL4A1P02462 AC018868.1-201ENST00000491307 315 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.89□□□□□ -2.27
COL4A1P02462 MTND2P33-201ENST00000506452 1031 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.89□□□□□ -2.27
COL4A1P02462 LRRC34P2-201ENST00000514850 553 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 RNU6-377P-201ENST00000515965 102 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.89□□□□□ -2.27
COL4A1P02462 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.89□□□□□ -2.27
COL4A1P02462 AC109446.1-201ENST00000566172 220 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 MIR3913-1-201ENST00000577744 102 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.89□□□□□ -2.27
COL4A1P02462 AC245014.2-201ENST00000603689 287 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 SNRPGP17-201ENST00000603780 214 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 AC246785.4-201ENST00000605374 287 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 AC138649.3-201ENST00000622154 254 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.89□□□□□ -2.27
COL4A1P02462 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.89□□□□□ -2.27
COL4A1P02462 SNORD56.1-201ENST00000362913 68 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 RNU6-179P-201ENST00000363350 107 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 RNU6-553P-201ENST00000364047 96 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AL365203.2-201ENST00000423444 196 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AC007969.2-201ENST00000441891 191 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AL122001.1-201ENST00000457027 370 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.88□□□□□ -2.27
COL4A1P02462 snoU13.14-201ENST00000459372 104 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.88□□□□□ -2.27
COL4A1P02462 AC117454.1-201ENST00000491120 168 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.88□□□□□ -2.27
COL4A1P02462 FAM206BP-201ENST00000510179 541 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 RNU6-351P-201ENST00000516097 100 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.88□□□□□ -2.27
COL4A1P02462 AC022616.8-201ENST00000533569 253 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AC012414.6-201ENST00000568241 401 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AC040904.1-201ENST00000590850 223 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AC078795.2-201ENST00000602835 1252 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AL121992.2-201ENST00000606262 256 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AC026585.1-201ENST00000619582 524 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AP003400.5-201ENST00000624827 617 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 AL157786.1-207ENST00000627771 695 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 U4.7-201ENST00000638126 106 ntBASIC0.88□□□□□ -2.27
COL4A1P02462 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms