Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AC074050.1-201ENST00000563247 211 ntBASIC2.56□□□□□ -2
HLA-DQA2P01906 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DQA2P01906 AC105245.1-201ENST00000581934 244 ntBASIC2.56□□□□□ -2
HLA-DQA2P01906 AL713866.2-201ENST00000603579 219 ntBASIC2.56□□□□□ -2
HLA-DQA2P01906 AC016925.2-201ENST00000605108 242 ntBASIC2.56□□□□□ -2
HLA-DQA2P01906 AC083806.3-201ENST00000614016 455 ntBASIC2.56□□□□□ -2
HLA-DQA2P01906 AC091953.5-201ENST00000622919 233 ntBASIC2.56□□□□□ -2
HLA-DQA2P01906 AC091925.1-201ENST00000623204 462 ntBASIC2.56□□□□□ -2
HLA-DQA2P01906 MIR7157-201ENST00000635801 60 ntBASIC2.56□□□□□ -2
HLA-DQA2P01906 MTND5P16-201ENST00000460269 1703 ntBASIC2.56□□□□□ -2
HLA-DQA2P01906 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
HLA-DQA2P01906 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.56□□□□□ -2
HLA-DQA2P01906 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQA2P01906 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQA2P01906 RNU6-1180P-201ENST00000364935 107 ntBASIC2.55□□□□□ -2
HLA-DQA2P01906 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQA2P01906 MIR153-2-201ENST00000385225 87 ntBASIC2.55□□□□□ -2
HLA-DQA2P01906 AL031121.1-201ENST00000406553 254 ntBASIC2.55□□□□□ -2
HLA-DQA2P01906 U6atac.2-201ENST00000408644 118 ntBASIC2.55□□□□□ -2
HLA-DQA2P01906 WARS2P1-201ENST00000429678 537 ntBASIC2.55□□□□□ -2
HLA-DQA2P01906 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQA2P01906 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DQA2P01906 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.55□□□□□ -2
HLA-DQA2P01906 UBBP3-201ENST00000445497 241 ntBASIC2.55□□□□□ -2
HLA-DQA2P01906 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DQA2P01906 BX510359.1-201ENST00000456973 237 ntBASIC2.55□□□□□ -2
HLA-DQA2P01906 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DQA2P01906 AP000870.1-201ENST00000472927 406 ntBASIC2.55□□□□□ -2
HLA-DQA2P01906 RNU6-567P-201ENST00000516746 107 ntBASIC2.55□□□□□ -2
HLA-DQA2P01906 RN7SKP282-201ENST00000516824 299 ntBASIC2.55□□□□□ -2
HLA-DQA2P01906 RNU6-56P-201ENST00000516986 93 ntBASIC2.55□□□□□ -2
HLA-DQA2P01906 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.55□□□□□ -2
HLA-DQA2P01906 RNU6-988P-201ENST00000519081 107 ntBASIC2.55□□□□□ -2
HLA-DQA2P01906 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.55□□□□□ -2
HLA-DQA2P01906 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DQA2P01906 UBL5P4-201ENST00000562584 236 ntBASIC2.55□□□□□ -2
HLA-DQA2P01906 AC138915.1-201ENST00000565427 1685 ntBASIC2.55□□□□□ -2
HLA-DQA2P01906 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DQA2P01906 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DQA2P01906 AC090115.4-201ENST00000609970 188 ntBASIC2.55□□□□□ -2
HLA-DQA2P01906 RMST_6.1-201ENST00000611980 203 ntBASIC2.55□□□□□ -2
HLA-DQA2P01906 PCGEM1.1-201ENST00000613431 131 ntBASIC2.55□□□□□ -2
HLA-DQA2P01906 AL132822.1-201ENST00000617063 513 ntBASIC2.55□□□□□ -2
HLA-DQA2P01906 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
HLA-DQA2P01906 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DQA2P01906 AC069528.2-201ENST00000624849 1991 ntBASIC2.54□□□□□ -2
HLA-DQA2P01906 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-DQA2P01906 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
HLA-DQA2P01906 MIR422A-201ENST00000362286 90 ntBASIC2.54□□□□□ -2
HLA-DQA2P01906 Y_RNA.202-201ENST00000364083 110 ntBASIC2.54□□□□□ -2
HLA-DQA2P01906 SNORD46.1-201ENST00000364139 104 ntBASIC2.54□□□□□ -2
HLA-DQA2P01906 RNU4-42P-201ENST00000364738 142 ntBASIC2.54□□□□□ -2
HLA-DQA2P01906 Y_RNA.364-201ENST00000365532 101 ntBASIC2.54□□□□□ -2
HLA-DQA2P01906 Y_RNA.557-201ENST00000384680 107 ntBASIC2.54□□□□□ -2
HLA-DQA2P01906 MIR627-201ENST00000384979 97 ntBASIC2.54□□□□□ -2
HLA-DQA2P01906 SNORA69.1-201ENST00000390904 137 ntBASIC2.54□□□□□ -2
HLA-DQA2P01906 AL590004.1-201ENST00000405321 300 ntBASIC2.54□□□□□ -2
HLA-DQA2P01906 MTCYBP2-201ENST00000407745 171 ntBASIC2.54□□□□□ -2
HLA-DQA2P01906 RNA5SP201-201ENST00000410316 124 ntBASIC2.54□□□□□ -2
HLA-DQA2P01906 Y_RNA.597-201ENST00000410463 100 ntBASIC2.54□□□□□ -2
HLA-DQA2P01906 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DQA2P01906 snoU13.22-201ENST00000459428 104 ntBASIC2.54□□□□□ -2
HLA-DQA2P01906 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQA2P01906 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQA2P01906 RNU4-77P-201ENST00000516692 156 ntBASIC2.54□□□□□ -2
HLA-DQA2P01906 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQA2P01906 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DQA2P01906 SNORD58B-201ENST00000607313 66 ntBASIC2.54□□□□□ -2
HLA-DQA2P01906 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.54□□□□□ -2
HLA-DQA2P01906 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DQA2P01906 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-DQA2P01906 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-DQA2P01906 AC026241.1-201ENST00000517873 2142 ntBASIC2.54□□□□□ -2
HLA-DQA2P01906 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.54□□□□□ -2
HLA-DQA2P01906 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.54□□□□□ -2
HLA-DQA2P01906 AC091812.1-201ENST00000432235 1948 ntBASIC2.54□□□□□ -2
HLA-DQA2P01906 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
HLA-DQA2P01906 AL035425.3-201ENST00000564206 4996 ntBASIC2.53□□□□□ -2
HLA-DQA2P01906 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.53□□□□□ -2
HLA-DQA2P01906 RNA5SP374-201ENST00000362939 125 ntBASIC2.53□□□□□ -2
HLA-DQA2P01906 SNORD115-32-201ENST00000364079 82 ntBASIC2.53□□□□□ -2
HLA-DQA2P01906 Y_RNA.319-201ENST00000365138 92 ntBASIC2.53□□□□□ -2
HLA-DQA2P01906 SNORA46.1-201ENST00000391069 153 ntBASIC2.53□□□□□ -2
HLA-DQA2P01906 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.53□□□□□ -2
HLA-DQA2P01906 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.53□□□□□ -2
HLA-DQA2P01906 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DQA2P01906 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.53□□□□□ -2
HLA-DQA2P01906 AC091826.1-201ENST00000514065 313 ntBASIC2.53□□□□□ -2
HLA-DQA2P01906 MIR449C-201ENST00000516047 92 ntBASIC2.53□□□□□ -2
HLA-DQA2P01906 SCARNA15.1-201ENST00000516384 125 ntBASIC2.53□□□□□ -2
HLA-DQA2P01906 RNU7-4P-201ENST00000516961 62 ntBASIC2.53□□□□□ -2
HLA-DQA2P01906 RNU6-58P-201ENST00000517143 103 ntBASIC2.53□□□□□ -2
HLA-DQA2P01906 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DQA2P01906 AC144568.1-201ENST00000520139 137 ntBASIC2.53□□□□□ -2
HLA-DQA2P01906 AC027288.2-201ENST00000553028 243 ntBASIC2.53□□□□□ -2
HLA-DQA2P01906 AC022432.1-201ENST00000595739 310 ntBASIC2.53□□□□□ -2
HLA-DQA2P01906 AL356280.1-201ENST00000603614 379 ntBASIC2.53□□□□□ -2
HLA-DQA2P01906 AC016727.2-201ENST00000603988 621 ntBASIC2.53□□□□□ -2
HLA-DQA2P01906 Y_RNA.812-201ENST00000610788 101 ntBASIC2.53□□□□□ -2
HLA-DQA2P01906 Y_RNA.784-201ENST00000613803 101 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms