Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 Y_RNA.138-201ENST00000363462 102 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 SNORD32A-201ENST00000364805 84 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 Y_RNA.431-201ENST00000384086 102 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 Y_RNA.533-201ENST00000384596 114 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 MIR9-1-201ENST00000385198 89 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 BTF3L4P2-201ENST00000392798 346 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 AL355497.1-201ENST00000406262 551 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 RNU6-174P-201ENST00000410406 106 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 RNA5SP184-201ENST00000411071 108 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.29□□□□□ -2.04
CLPTM1O96005 AC138623.1-201ENST00000418060 216 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 USMG5P1-201ENST00000425964 177 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 AL353997.1-201ENST00000432936 108 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 OSTCP8-201ENST00000445117 448 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.29□□□□□ -2.04
CLPTM1O96005 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.29□□□□□ -2.04
CLPTM1O96005 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.29□□□□□ -2.04
CLPTM1O96005 RNU7-152P-201ENST00000458982 64 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 AC112771.1-201ENST00000463581 102 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.29□□□□□ -2.04
CLPTM1O96005 AC027575.1-201ENST00000481064 460 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 AC097473.1-201ENST00000508142 408 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.29□□□□□ -2.04
CLPTM1O96005 CBX3P8-201ENST00000532412 525 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.29□□□□□ -2.04
CLPTM1O96005 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.29□□□□□ -2.04
CLPTM1O96005 MIR4273-201ENST00000582824 84 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 AC044792.1-201ENST00000593294 196 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 AL158827.2-201ENST00000602494 330 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 AL356055.1-201ENST00000602528 446 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.29□□□□□ -2.04
CLPTM1O96005 AC012640.5-201ENST00000623897 319 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 AL691447.3-201ENST00000635020 330 ntBASIC2.29□□□□□ -2.04
CLPTM1O96005 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.29□□□□□ -2.04
CLPTM1O96005 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.29□□□□□ -2.04
CLPTM1O96005 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CLPTM1O96005 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.28□□□□□ -2.04
CLPTM1O96005 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CLPTM1O96005 AL596028.1-201ENST00000326971 197 ntBASIC2.28□□□□□ -2.04
CLPTM1O96005 MIR369-201ENST00000362155 70 ntBASIC2.28□□□□□ -2.04
CLPTM1O96005 U3.13-201ENST00000364804 214 ntBASIC2.28□□□□□ -2.04
CLPTM1O96005 RNU6-487P-201ENST00000365430 104 ntBASIC2.28□□□□□ -2.04
CLPTM1O96005 RNU6-301P-201ENST00000384277 107 ntBASIC2.28□□□□□ -2.04
CLPTM1O96005 SNORA51.11-201ENST00000384442 131 ntBASIC2.28□□□□□ -2.04
CLPTM1O96005 MIR196B-201ENST00000384852 84 ntBASIC2.28□□□□□ -2.04
CLPTM1O96005 AL591034.2-201ENST00000402839 359 ntBASIC2.28□□□□□ -2.04
CLPTM1O96005 AC243428.1-201ENST00000421099 264 ntBASIC2.28□□□□□ -2.04
CLPTM1O96005 AC063976.3-201ENST00000426849 329 ntBASIC2.28□□□□□ -2.04
CLPTM1O96005 Z98742.2-201ENST00000431564 187 ntBASIC2.28□□□□□ -2.04
CLPTM1O96005 RPL23AP50-201ENST00000434149 455 ntBASIC2.28□□□□□ -2.04
CLPTM1O96005 RPL39P29-201ENST00000447779 157 ntBASIC2.28□□□□□ -2.04
CLPTM1O96005 AL109933.2-201ENST00000452651 260 ntBASIC2.28□□□□□ -2.04
CLPTM1O96005 ELOCP24-201ENST00000456370 334 ntBASIC2.28□□□□□ -2.04
CLPTM1O96005 AL441985.1-201ENST00000457727 251 ntBASIC2.28□□□□□ -2.04
CLPTM1O96005 AC114801.2-201ENST00000503825 781 ntBASIC2.28□□□□□ -2.04
CLPTM1O96005 RNU5B-3P-201ENST00000516601 115 ntBASIC2.28□□□□□ -2.04
CLPTM1O96005 Y_RNA.701-201ENST00000516812 110 ntBASIC2.28□□□□□ -2.04
CLPTM1O96005 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.28□□□□□ -2.04
CLPTM1O96005 MIR6852-201ENST00000621699 66 ntBASIC2.28□□□□□ -2.04
CLPTM1O96005 MTND5P9-201ENST00000503854 1755 ntBASIC2.28□□□□□ -2.04
CLPTM1O96005 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CLPTM1O96005 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CLPTM1O96005 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CLPTM1O96005 RNU6-212P-201ENST00000362642 104 ntBASIC2.27□□□□□ -2.05
CLPTM1O96005 Y_RNA.40-201ENST00000362645 93 ntBASIC2.27□□□□□ -2.05
CLPTM1O96005 RNU6-859P-201ENST00000362728 107 ntBASIC2.27□□□□□ -2.05
CLPTM1O96005 Y_RNA.146-201ENST00000363549 102 ntBASIC2.27□□□□□ -2.05
CLPTM1O96005 SNORA41-201ENST00000384675 132 ntBASIC2.27□□□□□ -2.05
CLPTM1O96005 SNORA75.6-201ENST00000391318 127 ntBASIC2.27□□□□□ -2.05
CLPTM1O96005 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CLPTM1O96005 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.27□□□□□ -2.05
CLPTM1O96005 AL354751.2-201ENST00000415471 210 ntBASIC2.27□□□□□ -2.05
CLPTM1O96005 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.27□□□□□ -2.05
CLPTM1O96005 AC079354.2-201ENST00000453523 154 ntBASIC2.27□□□□□ -2.05
CLPTM1O96005 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.27□□□□□ -2.05
CLPTM1O96005 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.27□□□□□ -2.05
CLPTM1O96005 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.27□□□□□ -2.05
CLPTM1O96005 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.27□□□□□ -2.05
CLPTM1O96005 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.27□□□□□ -2.05
CLPTM1O96005 MRPS36P4-201ENST00000534436 298 ntBASIC2.27□□□□□ -2.05
CLPTM1O96005 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.27□□□□□ -2.05
CLPTM1O96005 AC009318.2-201ENST00000610917 651 ntBASIC2.27□□□□□ -2.05
CLPTM1O96005 AC133104.2-201ENST00000615272 193 ntBASIC2.27□□□□□ -2.05
CLPTM1O96005 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CLPTM1O96005 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CLPTM1O96005 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.26□□□□□ -2.05
CLPTM1O96005 MTND5P10-201ENST00000603719 1809 ntBASIC2.26□□□□□ -2.05
CLPTM1O96005 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.26□□□□□ -2.05
CLPTM1O96005 Y_RNA.187-201ENST00000363918 113 ntBASIC2.26□□□□□ -2.05
CLPTM1O96005 RNU4-76P-201ENST00000364509 141 ntBASIC2.26□□□□□ -2.05
CLPTM1O96005 RNU6-596P-201ENST00000365395 98 ntBASIC2.26□□□□□ -2.05
CLPTM1O96005 RNA5SP37-201ENST00000365420 130 ntBASIC2.26□□□□□ -2.05
CLPTM1O96005 RNU6-1040P-201ENST00000383974 107 ntBASIC2.26□□□□□ -2.05
CLPTM1O96005 SNORA36A-201ENST00000384221 132 ntBASIC2.26□□□□□ -2.05
CLPTM1O96005 RNA5SP390-201ENST00000410191 113 ntBASIC2.26□□□□□ -2.05
CLPTM1O96005 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.26□□□□□ -2.05
CLPTM1O96005 RPL23AP95-201ENST00000426806 265 ntBASIC2.26□□□□□ -2.05
CLPTM1O96005 MTCO2P12-201ENST00000427426 682 ntBASIC2.26□□□□□ -2.05
CLPTM1O96005 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms