Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.52□□□□□ -2.17
CLDN9O95484 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.52□□□□□ -2.17
CLDN9O95484 AC008834.1-201ENST00000511612 175 ntBASIC1.52□□□□□ -2.17
CLDN9O95484 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.52□□□□□ -2.17
CLDN9O95484 AL137161.1-201ENST00000532231 390 ntBASIC1.52□□□□□ -2.17
CLDN9O95484 MTCO3P23-201ENST00000561363 289 ntBASIC1.52□□□□□ -2.17
CLDN9O95484 MIR3923-201ENST00000579521 83 ntBASIC1.52□□□□□ -2.17
CLDN9O95484 MTATP6P3-201ENST00000581686 676 ntBASIC1.52□□□□□ -2.17
CLDN9O95484 AC063944.3-201ENST00000609969 533 ntBASIC1.52□□□□□ -2.17
CLDN9O95484 U2.17-201ENST00000611454 95 ntBASIC1.52□□□□□ -2.17
CLDN9O95484 uc_338.5-201ENST00000611839 155 ntBASIC1.52□□□□□ -2.17
CLDN9O95484 AC073114.1-201ENST00000612027 490 ntBASIC1.52□□□□□ -2.17
CLDN9O95484 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.52□□□□□ -2.17
CLDN9O95484 AC136475.10-201ENST00000620253 385 ntBASIC1.52□□□□□ -2.17
CLDN9O95484 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CLDN9O95484 RNU6-1120P-201ENST00000362988 108 ntBASIC1.51□□□□□ -2.17
CLDN9O95484 RNU6-457P-201ENST00000363999 107 ntBASIC1.51□□□□□ -2.17
CLDN9O95484 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.51□□□□□ -2.17
CLDN9O95484 Y_RNA.504-201ENST00000384481 104 ntBASIC1.51□□□□□ -2.17
CLDN9O95484 RNU6-903P-201ENST00000391270 109 ntBASIC1.51□□□□□ -2.17
CLDN9O95484 NCOR1P3-201ENST00000420479 303 ntBASIC1.51□□□□□ -2.17
CLDN9O95484 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.51□□□□□ -2.17
CLDN9O95484 SNRPEP8-201ENST00000442866 260 ntBASIC1.51□□□□□ -2.17
CLDN9O95484 RPS27AP8-201ENST00000452665 445 ntBASIC1.51□□□□□ -2.17
CLDN9O95484 AL356010.1-201ENST00000456364 102 ntBASIC1.51□□□□□ -2.17
CLDN9O95484 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.51□□□□□ -2.17
CLDN9O95484 RNU7-167P-201ENST00000459160 62 ntBASIC1.51□□□□□ -2.17
CLDN9O95484 AC087884.1-201ENST00000469738 328 ntBASIC1.51□□□□□ -2.17
CLDN9O95484 AC016632.1-201ENST00000503994 196 ntBASIC1.51□□□□□ -2.17
CLDN9O95484 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.51□□□□□ -2.17
CLDN9O95484 AC091874.1-201ENST00000511402 339 ntBASIC1.51□□□□□ -2.17
CLDN9O95484 AC105417.1-201ENST00000514691 285 ntBASIC1.51□□□□□ -2.17
CLDN9O95484 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.51□□□□□ -2.17
CLDN9O95484 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.51□□□□□ -2.17
CLDN9O95484 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.51□□□□□ -2.17
CLDN9O95484 MIR3683-201ENST00000580847 82 ntBASIC1.51□□□□□ -2.17
CLDN9O95484 AC005786.1-201ENST00000588553 154 ntBASIC1.51□□□□□ -2.17
CLDN9O95484 AC078795.3-201ENST00000602913 472 ntBASIC1.51□□□□□ -2.17
CLDN9O95484 RNU6-85P-201ENST00000605989 107 ntBASIC1.51□□□□□ -2.17
CLDN9O95484 AP001596.2-201ENST00000608410 312 ntBASIC1.51□□□□□ -2.17
CLDN9O95484 RMST_6.1-201ENST00000611980 203 ntBASIC1.51□□□□□ -2.17
CLDN9O95484 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CLDN9O95484 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CLDN9O95484 MIR424-201ENST00000362227 98 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 U3.9-201ENST00000363823 204 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 RNU6-438P-201ENST00000365561 103 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 Y_RNA.399-201ENST00000383955 105 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 RNU6-42P-201ENST00000384165 107 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 RNU6-439P-201ENST00000384188 106 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 RNU6-517P-201ENST00000384362 110 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 RNA5SP201-201ENST00000410316 124 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.5□□□□□ -2.17
CLDN9O95484 AC123900.1-201ENST00000420390 96 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 MTCYBP8-201ENST00000422855 651 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 AC092447.3-201ENST00000426027 686 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 RPL23AP95-201ENST00000426806 265 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.5□□□□□ -2.17
CLDN9O95484 RNU7-63P-201ENST00000459054 62 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 AC023790.1-201ENST00000482174 347 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.5□□□□□ -2.17
CLDN9O95484 ATP5EP1-201ENST00000510257 156 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 SNORA31.17-201ENST00000516953 127 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 SNORA44.1-201ENST00000517031 108 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 MTCO2P4-201ENST00000517968 247 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 AC087441.2-201ENST00000529141 262 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.5□□□□□ -2.17
CLDN9O95484 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.5□□□□□ -2.17
CLDN9O95484 HIF1AP1-201ENST00000553642 175 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.5□□□□□ -2.17
CLDN9O95484 MIR3198-2-201ENST00000577868 80 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 MIR4285-201ENST00000581001 85 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 AC010900.2-201ENST00000604508 210 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 AL356157.2-201ENST00000605122 111 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 BX248123.2-201ENST00000606318 124 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 AP000648.3-201ENST00000623539 4507 ntBASIC1.5□□□□□ -2.17
CLDN9O95484 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.5□□□□□ -2.17
CLDN9O95484 MIR126-201ENST00000362291 85 ntBASIC1.49□□□□□ -2.17
CLDN9O95484 Y_RNA.159-201ENST00000363674 87 ntBASIC1.49□□□□□ -2.17
CLDN9O95484 RNU6-348P-201ENST00000384386 107 ntBASIC1.49□□□□□ -2.17
CLDN9O95484 RNU6-997P-201ENST00000384725 107 ntBASIC1.49□□□□□ -2.17
CLDN9O95484 MIR30A-201ENST00000385092 71 ntBASIC1.49□□□□□ -2.17
CLDN9O95484 SNORA26.3-201ENST00000391119 136 ntBASIC1.49□□□□□ -2.17
CLDN9O95484 AC068050.1-201ENST00000394891 380 ntBASIC1.49□□□□□ -2.17
CLDN9O95484 BTF3P4-201ENST00000418852 495 ntBASIC1.49□□□□□ -2.17
CLDN9O95484 AC139712.2-201ENST00000424302 339 ntBASIC1.49□□□□□ -2.17
CLDN9O95484 Z82205.1-201ENST00000428456 297 ntBASIC1.49□□□□□ -2.17
CLDN9O95484 AL133396.1-201ENST00000432048 687 ntBASIC1.49□□□□□ -2.17
CLDN9O95484 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.49□□□□□ -2.17
CLDN9O95484 AMD1P1-201ENST00000457220 922 ntBASIC1.49□□□□□ -2.17
CLDN9O95484 RNU1-131P-201ENST00000458943 161 ntBASIC1.49□□□□□ -2.17
CLDN9O95484 AC010409.1-201ENST00000487382 476 ntBASIC1.49□□□□□ -2.17
CLDN9O95484 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.49□□□□□ -2.17
CLDN9O95484 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.49□□□□□ -2.17
CLDN9O95484 Y_RNA.695-201ENST00000516715 107 ntBASIC1.49□□□□□ -2.17
CLDN9O95484 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.49□□□□□ -2.17
CLDN9O95484 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.49□□□□□ -2.17
CLDN9O95484 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.49□□□□□ -2.17
CLDN9O95484 SUB1P3-201ENST00000564581 315 ntBASIC1.49□□□□□ -2.17
CLDN9O95484 MIR3941-201ENST00000582572 103 ntBASIC1.49□□□□□ -2.17
CLDN9O95484 SNORA4-201ENST00000584302 138 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms