Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 MIR4319-201ENST00000577285 85 ntBASIC2.36□□□□□ -2.03
NKX2-2O95096 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.36□□□□□ -2.03
NKX2-2O95096 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.36□□□□□ -2.03
NKX2-2O95096 AL158827.2-201ENST00000602494 330 ntBASIC2.36□□□□□ -2.03
NKX2-2O95096 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.36□□□□□ -2.03
NKX2-2O95096 AC063943.3-201ENST00000615562 356 ntBASIC2.36□□□□□ -2.03
NKX2-2O95096 AL359757.2-201ENST00000624309 274 ntBASIC2.36□□□□□ -2.03
NKX2-2O95096 AC092608.2-201ENST00000624427 218 ntBASIC2.36□□□□□ -2.03
NKX2-2O95096 AL691447.3-201ENST00000635020 330 ntBASIC2.36□□□□□ -2.03
NKX2-2O95096 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.36□□□□□ -2.03
NKX2-2O95096 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NKX2-2O95096 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NKX2-2O95096 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
NKX2-2O95096 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
NKX2-2O95096 SNORD115-32-201ENST00000364079 82 ntBASIC2.35□□□□□ -2.03
NKX2-2O95096 SNORA25B-201ENST00000365507 128 ntBASIC2.35□□□□□ -2.03
NKX2-2O95096 Y_RNA.387-201ENST00000383918 102 ntBASIC2.35□□□□□ -2.03
NKX2-2O95096 RNU6-546P-201ENST00000383991 107 ntBASIC2.35□□□□□ -2.03
NKX2-2O95096 RNU6-378P-201ENST00000384324 107 ntBASIC2.35□□□□□ -2.03
NKX2-2O95096 Y_RNA.533-201ENST00000384596 114 ntBASIC2.35□□□□□ -2.03
NKX2-2O95096 SNORA75.4-201ENST00000391278 119 ntBASIC2.35□□□□□ -2.03
NKX2-2O95096 MIR208B-201ENST00000401172 77 ntBASIC2.35□□□□□ -2.03
NKX2-2O95096 RNU2-48P-201ENST00000410694 191 ntBASIC2.35□□□□□ -2.03
NKX2-2O95096 RNU2-41P-201ENST00000410991 178 ntBASIC2.35□□□□□ -2.03
NKX2-2O95096 RNU6-370P-201ENST00000411008 104 ntBASIC2.35□□□□□ -2.03
NKX2-2O95096 RNA5SP184-201ENST00000411071 108 ntBASIC2.35□□□□□ -2.03
NKX2-2O95096 RNU2-32P-201ENST00000411193 191 ntBASIC2.35□□□□□ -2.03
NKX2-2O95096 ARL5AP4-201ENST00000430731 512 ntBASIC2.35□□□□□ -2.03
NKX2-2O95096 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.35□□□□□ -2.03
NKX2-2O95096 RPL39P40-201ENST00000445481 146 ntBASIC2.35□□□□□ -2.03
NKX2-2O95096 snoU13.6-201ENST00000458785 104 ntBASIC2.35□□□□□ -2.03
NKX2-2O95096 AC087477.1-201ENST00000465747 340 ntBASIC2.35□□□□□ -2.03
NKX2-2O95096 RN7SL499P-201ENST00000481141 276 ntBASIC2.35□□□□□ -2.03
NKX2-2O95096 AC022616.8-201ENST00000533569 253 ntBASIC2.35□□□□□ -2.03
NKX2-2O95096 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.35□□□□□ -2.03
NKX2-2O95096 Y_RNA.804-201ENST00000615262 101 ntBASIC2.35□□□□□ -2.03
NKX2-2O95096 MIR1302-1-201ENST00000637932 143 ntBASIC2.35□□□□□ -2.03
NKX2-2O95096 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.35□□□□□ -2.03
NKX2-2O95096 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.35□□□□□ -2.03
NKX2-2O95096 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
NKX2-2O95096 RNU6-1188P-201ENST00000363795 107 ntBASIC2.34□□□□□ -2.03
NKX2-2O95096 RNU6-595P-201ENST00000363944 107 ntBASIC2.34□□□□□ -2.03
NKX2-2O95096 RNA5SP456-201ENST00000364002 114 ntBASIC2.34□□□□□ -2.03
NKX2-2O95096 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.34□□□□□ -2.03
NKX2-2O95096 Y_RNA.404-201ENST00000383978 102 ntBASIC2.34□□□□□ -2.03
NKX2-2O95096 Y_RNA.529-201ENST00000384586 119 ntBASIC2.34□□□□□ -2.03
NKX2-2O95096 MIR27B-201ENST00000385129 97 ntBASIC2.34□□□□□ -2.03
NKX2-2O95096 SNORA12-201ENST00000391162 147 ntBASIC2.34□□□□□ -2.03
NKX2-2O95096 USMG5P1-201ENST00000425964 177 ntBASIC2.34□□□□□ -2.03
NKX2-2O95096 AC009238.1-201ENST00000442165 424 ntBASIC2.34□□□□□ -2.03
NKX2-2O95096 AC009237.6-201ENST00000446969 424 ntBASIC2.34□□□□□ -2.03
NKX2-2O95096 OR2AQ1P-201ENST00000451972 200 ntBASIC2.34□□□□□ -2.03
NKX2-2O95096 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.34□□□□□ -2.03
NKX2-2O95096 AC132942.1-201ENST00000486753 483 ntBASIC2.34□□□□□ -2.03
NKX2-2O95096 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
NKX2-2O95096 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.34□□□□□ -2.03
NKX2-2O95096 RNU6-559P-201ENST00000516151 98 ntBASIC2.34□□□□□ -2.03
NKX2-2O95096 CBX3P8-201ENST00000532412 525 ntBASIC2.34□□□□□ -2.03
NKX2-2O95096 APOOP3-201ENST00000536787 586 ntBASIC2.34□□□□□ -2.03
NKX2-2O95096 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.34□□□□□ -2.03
NKX2-2O95096 PISRT1.1-201ENST00000616930 107 ntBASIC2.34□□□□□ -2.03
NKX2-2O95096 AL669831.3-213ENST00000636676 183 ntBASIC2.34□□□□□ -2.03
NKX2-2O95096 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NKX2-2O95096 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
NKX2-2O95096 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NKX2-2O95096 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.33□□□□□ -2.04
NKX2-2O95096 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
NKX2-2O95096 Y_RNA.2-201ENST00000362330 96 ntBASIC2.33□□□□□ -2.04
NKX2-2O95096 RNU6-867P-201ENST00000364956 107 ntBASIC2.33□□□□□ -2.04
NKX2-2O95096 U8.10-201ENST00000384260 133 ntBASIC2.33□□□□□ -2.04
NKX2-2O95096 RNU6-1297P-201ENST00000384415 104 ntBASIC2.33□□□□□ -2.04
NKX2-2O95096 MT-TD-201ENST00000387419 68 ntBASIC2.33□□□□□ -2.04
NKX2-2O95096 MIR1294-201ENST00000408503 142 ntBASIC2.33□□□□□ -2.04
NKX2-2O95096 Y_RNA.604-201ENST00000410574 102 ntBASIC2.33□□□□□ -2.04
NKX2-2O95096 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.33□□□□□ -2.04
NKX2-2O95096 RPS12P2-201ENST00000439728 269 ntBASIC2.33□□□□□ -2.04
NKX2-2O95096 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.33□□□□□ -2.04
NKX2-2O95096 AC108938.1-201ENST00000451204 136 ntBASIC2.33□□□□□ -2.04
NKX2-2O95096 AL109933.2-201ENST00000452651 260 ntBASIC2.33□□□□□ -2.04
NKX2-2O95096 RPL7P42-201ENST00000481005 679 ntBASIC2.33□□□□□ -2.04
NKX2-2O95096 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.33□□□□□ -2.04
NKX2-2O95096 NDUFA5P6-201ENST00000542110 379 ntBASIC2.33□□□□□ -2.04
NKX2-2O95096 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
NKX2-2O95096 AC005899.2-201ENST00000584353 90 ntBASIC2.33□□□□□ -2.04
NKX2-2O95096 AC010928.2-201ENST00000588017 287 ntBASIC2.33□□□□□ -2.04
NKX2-2O95096 AL627309.6-201ENST00000606857 840 ntBASIC2.33□□□□□ -2.04
NKX2-2O95096 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.33□□□□□ -2.04
NKX2-2O95096 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
NKX2-2O95096 AL132822.1-201ENST00000617063 513 ntBASIC2.33□□□□□ -2.04
NKX2-2O95096 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NKX2-2O95096 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NKX2-2O95096 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NKX2-2O95096 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NKX2-2O95096 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
NKX2-2O95096 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.32□□□□□ -2.04
NKX2-2O95096 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NKX2-2O95096 RNU6-1159P-201ENST00000362933 107 ntBASIC2.32□□□□□ -2.04
NKX2-2O95096 VTRNA1-1-201ENST00000363120 99 ntBASIC2.32□□□□□ -2.04
NKX2-2O95096 RNU5E-4P-201ENST00000364931 120 ntBASIC2.32□□□□□ -2.04
NKX2-2O95096 Y_RNA.356-201ENST00000365475 113 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms