Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RNU1-17P-201ENST00000363022 152 ntBASIC1.32□□□□□ -2.2
SEMA3DO95025 MIR764-201ENST00000390811 85 ntBASIC1.32□□□□□ -2.2
SEMA3DO95025 RNA5SP100-201ENST00000410903 110 ntBASIC1.32□□□□□ -2.2
SEMA3DO95025 RNA5SP59-201ENST00000410922 110 ntBASIC1.32□□□□□ -2.2
SEMA3DO95025 MTATP6P18-201ENST00000417994 673 ntBASIC1.32□□□□□ -2.2
SEMA3DO95025 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.32□□□□□ -2.2
SEMA3DO95025 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.32□□□□□ -2.2
SEMA3DO95025 AC092447.3-201ENST00000426027 686 ntBASIC1.32□□□□□ -2.2
SEMA3DO95025 SNRPFP3-201ENST00000457792 225 ntBASIC1.32□□□□□ -2.2
SEMA3DO95025 RNU6-333P-201ENST00000459117 107 ntBASIC1.32□□□□□ -2.2
SEMA3DO95025 GMFBP1-201ENST00000467831 427 ntBASIC1.32□□□□□ -2.2
SEMA3DO95025 BET1P1-201ENST00000482276 359 ntBASIC1.32□□□□□ -2.2
SEMA3DO95025 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.32□□□□□ -2.2
SEMA3DO95025 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.32□□□□□ -2.2
SEMA3DO95025 AC105417.1-201ENST00000514691 285 ntBASIC1.32□□□□□ -2.2
SEMA3DO95025 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.32□□□□□ -2.2
SEMA3DO95025 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.32□□□□□ -2.2
SEMA3DO95025 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.32□□□□□ -2.2
SEMA3DO95025 SUB1P3-201ENST00000564581 315 ntBASIC1.32□□□□□ -2.2
SEMA3DO95025 AL391840.1-201ENST00000571144 367 ntBASIC1.32□□□□□ -2.2
SEMA3DO95025 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.32□□□□□ -2.2
SEMA3DO95025 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.32□□□□□ -2.2
SEMA3DO95025 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.32□□□□□ -2.2
SEMA3DO95025 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.31□□□□□ -2.2
SEMA3DO95025 AP000560.1-201ENST00000624150 1937 ntBASIC1.31□□□□□ -2.2
SEMA3DO95025 LINC02555-201ENST00000563933 1951 ntBASIC1.31□□□□□ -2.2
SEMA3DO95025 RNU6-1120P-201ENST00000362988 108 ntBASIC1.31□□□□□ -2.2
SEMA3DO95025 Y_RNA.332-201ENST00000365271 113 ntBASIC1.31□□□□□ -2.2
SEMA3DO95025 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SEMA3DO95025 SNORA36A-201ENST00000384221 132 ntBASIC1.31□□□□□ -2.2
SEMA3DO95025 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
SEMA3DO95025 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SEMA3DO95025 MTCYBP2-201ENST00000407745 171 ntBASIC1.31□□□□□ -2.2
SEMA3DO95025 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.31□□□□□ -2.2
SEMA3DO95025 SNRPEP8-201ENST00000442866 260 ntBASIC1.31□□□□□ -2.2
SEMA3DO95025 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.31□□□□□ -2.2
SEMA3DO95025 AC130509.1-201ENST00000464158 433 ntBASIC1.31□□□□□ -2.2
SEMA3DO95025 AC098862.1-201ENST00000504991 413 ntBASIC1.31□□□□□ -2.2
SEMA3DO95025 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.31□□□□□ -2.2
SEMA3DO95025 ATP5EP1-201ENST00000510257 156 ntBASIC1.31□□□□□ -2.2
SEMA3DO95025 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.31□□□□□ -2.2
SEMA3DO95025 MTCO2P4-201ENST00000517968 247 ntBASIC1.31□□□□□ -2.2
SEMA3DO95025 AL137161.1-201ENST00000532231 390 ntBASIC1.31□□□□□ -2.2
SEMA3DO95025 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.31□□□□□ -2.2
SEMA3DO95025 AC068790.2-201ENST00000602601 557 ntBASIC1.31□□□□□ -2.2
SEMA3DO95025 RNU6-85P-201ENST00000605989 107 ntBASIC1.31□□□□□ -2.2
SEMA3DO95025 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
SEMA3DO95025 AC022513.1-201ENST00000624512 117 ntBASIC1.31□□□□□ -2.2
SEMA3DO95025 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.31□□□□□ -2.2
SEMA3DO95025 CBX3P1-201ENST00000325243 554 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 Y_RNA.381-201ENST00000365666 102 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 Y_RNA.399-201ENST00000383955 105 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 SNORD26-201ENST00000384147 75 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 RNU6-439P-201ENST00000384188 106 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 RNU6-378P-201ENST00000384324 107 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 Y_RNA.504-201ENST00000384481 104 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 AL049545.1-201ENST00000401856 572 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 RNA5SP201-201ENST00000410316 124 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 RN7SKP61-201ENST00000410642 295 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 RNU2-41P-201ENST00000410991 178 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.3□□□□□ -2.2
SEMA3DO95025 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.3□□□□□ -2.2
SEMA3DO95025 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.3□□□□□ -2.2
SEMA3DO95025 AC078809.1-201ENST00000427601 140 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.3□□□□□ -2.2
SEMA3DO95025 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.3□□□□□ -2.2
SEMA3DO95025 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.3□□□□□ -2.2
SEMA3DO95025 AL356010.1-201ENST00000456364 102 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 RNU7-167P-201ENST00000459160 62 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 AC010409.1-201ENST00000487382 476 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 ARL2BPP4-201ENST00000506854 471 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 RNA5SP458-201ENST00000516188 119 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 Y_RNA.695-201ENST00000516715 107 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 AC087441.2-201ENST00000529141 262 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.3□□□□□ -2.2
SEMA3DO95025 HIF1AP1-201ENST00000553642 175 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 AL161670.1-201ENST00000554348 137 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.3□□□□□ -2.2
SEMA3DO95025 MIR3923-201ENST00000579521 83 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 MIR4303-201ENST00000581299 66 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 VN1R107P-201ENST00000601784 209 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 AC121247.2-201ENST00000604776 136 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 AP001485.1-201ENST00000604799 199 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 AP000770.2-201ENST00000623694 100 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 AL450472.1-202ENST00000637286 180 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 ZNF209P-201ENST00000593450 2304 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SEMA3DO95025 MTND4P14-201ENST00000435799 1354 ntBASIC1.3□□□□□ -2.2
SEMA3DO95025 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.3□□□□□ -2.2
SEMA3DO95025 MIR340-201ENST00000362125 95 ntBASIC1.29□□□□□ -2.2
SEMA3DO95025 RNU6-457P-201ENST00000363999 107 ntBASIC1.29□□□□□ -2.2
SEMA3DO95025 RNU6-203P-201ENST00000384038 104 ntBASIC1.29□□□□□ -2.2
SEMA3DO95025 U8.10-201ENST00000384260 133 ntBASIC1.29□□□□□ -2.2
SEMA3DO95025 SNORA12.2-201ENST00000391040 156 ntBASIC1.29□□□□□ -2.2
SEMA3DO95025 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.29□□□□□ -2.2
SEMA3DO95025 MTCO3P41-201ENST00000414801 328 ntBASIC1.29□□□□□ -2.2
SEMA3DO95025 RPL23AP95-201ENST00000426806 265 ntBASIC1.29□□□□□ -2.2
SEMA3DO95025 AL133396.1-201ENST00000432048 687 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms