Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRPF40AO75400 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRPF40AO75400 AL109809.4-201ENST00000603520 2185 ntBASIC4□□□□□ -1.77
PRPF40AO75400 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PRPF40AO75400 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRPF40AO75400 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4□□□□□ -1.77
PRPF40AO75400 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4□□□□□ -1.77
PRPF40AO75400 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4□□□□□ -1.77
PRPF40AO75400 Y_RNA.16-201ENST00000362421 102 ntBASIC4□□□□□ -1.77
PRPF40AO75400 RNU6-290P-201ENST00000365212 101 ntBASIC4□□□□□ -1.77
PRPF40AO75400 Y_RNA.352-201ENST00000365439 102 ntBASIC4□□□□□ -1.77
PRPF40AO75400 RNU6-793P-201ENST00000384233 104 ntBASIC4□□□□□ -1.77
PRPF40AO75400 RNU6-102P-201ENST00000384485 104 ntBASIC4□□□□□ -1.77
PRPF40AO75400 AL033519.2-201ENST00000403958 392 ntBASIC4□□□□□ -1.77
PRPF40AO75400 AL035423.1-201ENST00000420331 213 ntBASIC4□□□□□ -1.77
PRPF40AO75400 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4□□□□□ -1.77
PRPF40AO75400 AC073901.1-201ENST00000462471 408 ntBASIC4□□□□□ -1.77
PRPF40AO75400 CENPBD1P1-201ENST00000464061 469 ntBASIC4□□□□□ -1.77
PRPF40AO75400 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4□□□□□ -1.77
PRPF40AO75400 RPL26P26-201ENST00000480251 434 ntBASIC4□□□□□ -1.77
PRPF40AO75400 SEPT14P8-201ENST00000508026 178 ntBASIC4□□□□□ -1.77
PRPF40AO75400 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4□□□□□ -1.77
PRPF40AO75400 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4□□□□□ -1.77
PRPF40AO75400 SCARNA24.2-201ENST00000516968 130 ntBASIC4□□□□□ -1.77
PRPF40AO75400 U4.6-201ENST00000621618 127 ntBASIC4□□□□□ -1.77
PRPF40AO75400 AL034408.1-202ENST00000636088 415 ntBASIC4□□□□□ -1.77
PRPF40AO75400 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
PRPF40AO75400 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRPF40AO75400 MTND5P35-201ENST00000557537 1720 ntBASIC4□□□□□ -1.77
PRPF40AO75400 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4□□□□□ -1.77
PRPF40AO75400 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRPF40AO75400 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4□□□□□ -1.77
PRPF40AO75400 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
PRPF40AO75400 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRPF40AO75400 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.99□□□□□ -1.77
PRPF40AO75400 Y_RNA.54-201ENST00000362766 105 ntBASIC3.99□□□□□ -1.77
PRPF40AO75400 RNU6-626P-201ENST00000363354 107 ntBASIC3.99□□□□□ -1.77
PRPF40AO75400 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.99□□□□□ -1.77
PRPF40AO75400 SNORA5A-201ENST00000384111 134 ntBASIC3.99□□□□□ -1.77
PRPF40AO75400 RNU6-378P-201ENST00000384324 107 ntBASIC3.99□□□□□ -1.77
PRPF40AO75400 MIR591-201ENST00000385290 95 ntBASIC3.99□□□□□ -1.77
PRPF40AO75400 SNORA53-201ENST00000391141 249 ntBASIC3.99□□□□□ -1.77
PRPF40AO75400 RNA5SP293-201ENST00000410527 113 ntBASIC3.99□□□□□ -1.77
PRPF40AO75400 AL390729.2-201ENST00000416137 156 ntBASIC3.99□□□□□ -1.77
PRPF40AO75400 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.99□□□□□ -1.77
PRPF40AO75400 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PRPF40AO75400 UQCRBP2-201ENST00000447827 297 ntBASIC3.99□□□□□ -1.77
PRPF40AO75400 RN7SL330P-201ENST00000469709 307 ntBASIC3.99□□□□□ -1.77
PRPF40AO75400 AL121594.1-201ENST00000475906 575 ntBASIC3.99□□□□□ -1.77
PRPF40AO75400 AC103975.1-201ENST00000482506 483 ntBASIC3.99□□□□□ -1.77
PRPF40AO75400 SNORA70.18-201ENST00000516696 98 ntBASIC3.99□□□□□ -1.77
PRPF40AO75400 AC107934.2-201ENST00000518653 310 ntBASIC3.99□□□□□ -1.77
PRPF40AO75400 AC079598.5-201ENST00000547460 117 ntBASIC3.99□□□□□ -1.77
PRPF40AO75400 AK6P2-201ENST00000549020 471 ntBASIC3.99□□□□□ -1.77
PRPF40AO75400 AC027176.1-201ENST00000560204 514 ntBASIC3.99□□□□□ -1.77
PRPF40AO75400 AP003355.3-201ENST00000623465 114 ntBASIC3.99□□□□□ -1.77
PRPF40AO75400 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.99□□□□□ -1.77
PRPF40AO75400 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRPF40AO75400 AL359854.1-201ENST00000614203 1594 ntBASIC3.98□□□□□ -1.77
PRPF40AO75400 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PRPF40AO75400 Y_RNA.20-201ENST00000362479 113 ntBASIC3.98□□□□□ -1.77
PRPF40AO75400 SNORD56.3-201ENST00000363507 71 ntBASIC3.98□□□□□ -1.77
PRPF40AO75400 RNU6-799P-201ENST00000363567 107 ntBASIC3.98□□□□□ -1.77
PRPF40AO75400 RNU6-805P-201ENST00000365643 106 ntBASIC3.98□□□□□ -1.77
PRPF40AO75400 RNU6-20P-201ENST00000384106 107 ntBASIC3.98□□□□□ -1.77
PRPF40AO75400 MT-TR-201ENST00000387439 65 ntBASIC3.98□□□□□ -1.77
PRPF40AO75400 RNU1-101P-201ENST00000391171 127 ntBASIC3.98□□□□□ -1.77
PRPF40AO75400 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.98□□□□□ -1.77
PRPF40AO75400 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.98□□□□□ -1.77
PRPF40AO75400 Z98742.2-201ENST00000431564 187 ntBASIC3.98□□□□□ -1.77
PRPF40AO75400 AL358232.1-201ENST00000448030 501 ntBASIC3.98□□□□□ -1.77
PRPF40AO75400 AC007395.1-201ENST00000451333 677 ntBASIC3.98□□□□□ -1.77
PRPF40AO75400 HMGB3P17-201ENST00000504195 649 ntBASIC3.98□□□□□ -1.77
PRPF40AO75400 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.98□□□□□ -1.77
PRPF40AO75400 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.98□□□□□ -1.77
PRPF40AO75400 SNORA51-201ENST00000606420 132 ntBASIC3.98□□□□□ -1.77
PRPF40AO75400 AC037487.3-201ENST00000606668 112 ntBASIC3.98□□□□□ -1.77
PRPF40AO75400 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.98□□□□□ -1.77
PRPF40AO75400 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF40AO75400 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF40AO75400 RNU6-961P-201ENST00000363893 105 ntBASIC3.97□□□□□ -1.77
PRPF40AO75400 AL512633.1-201ENST00000399931 655 ntBASIC3.97□□□□□ -1.77
PRPF40AO75400 RNU4-30P-201ENST00000410245 143 ntBASIC3.97□□□□□ -1.77
PRPF40AO75400 AC009414.1-201ENST00000427200 443 ntBASIC3.97□□□□□ -1.77
PRPF40AO75400 HSPE1P25-201ENST00000455484 251 ntBASIC3.97□□□□□ -1.77
PRPF40AO75400 RPS3P1-201ENST00000456781 192 ntBASIC3.97□□□□□ -1.77
PRPF40AO75400 AC145146.1-201ENST00000496370 254 ntBASIC3.97□□□□□ -1.77
PRPF40AO75400 AC093663.1-201ENST00000497190 394 ntBASIC3.97□□□□□ -1.77
PRPF40AO75400 RNU6-111P-201ENST00000517179 105 ntBASIC3.97□□□□□ -1.77
PRPF40AO75400 AC093331.1-201ENST00000521474 169 ntBASIC3.97□□□□□ -1.77
PRPF40AO75400 AC005176.2-201ENST00000596933 147 ntBASIC3.97□□□□□ -1.77
PRPF40AO75400 AC008739.3-201ENST00000603262 127 ntBASIC3.97□□□□□ -1.77
PRPF40AO75400 MZT1P2-201ENST00000604387 248 ntBASIC3.97□□□□□ -1.77
PRPF40AO75400 AL670379.2-201ENST00000604983 252 ntBASIC3.97□□□□□ -1.77
PRPF40AO75400 PCGEM1.1-201ENST00000613431 131 ntBASIC3.97□□□□□ -1.77
PRPF40AO75400 MIR6075-201ENST00000620782 95 ntBASIC3.97□□□□□ -1.77
PRPF40AO75400 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.97□□□□□ -1.77
PRPF40AO75400 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
PRPF40AO75400 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PRPF40AO75400 AC099654.7-201ENST00000635788 2127 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms