Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 MTND3P21-201ENST00000433774 331 ntBASIC1.71□□□□□ -2.14
HCN1O60741 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.71□□□□□ -2.14
HCN1O60741 RNU7-138P-201ENST00000459479 64 ntBASIC1.71□□□□□ -2.14
HCN1O60741 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.71□□□□□ -2.14
HCN1O60741 RNU6-506P-201ENST00000516553 94 ntBASIC1.71□□□□□ -2.14
HCN1O60741 SNORA31.16-201ENST00000516773 139 ntBASIC1.71□□□□□ -2.14
HCN1O60741 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.71□□□□□ -2.14
HCN1O60741 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.71□□□□□ -2.14
HCN1O60741 SNRPGP19-201ENST00000603826 189 ntBASIC1.71□□□□□ -2.14
HCN1O60741 AL034555.1-201ENST00000604816 211 ntBASIC1.71□□□□□ -2.14
HCN1O60741 AC018889.1-201ENST00000605372 397 ntBASIC1.71□□□□□ -2.14
HCN1O60741 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HCN1O60741 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HCN1O60741 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HCN1O60741 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
HCN1O60741 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
HCN1O60741 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
HCN1O60741 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HCN1O60741 RNU6-1141P-201ENST00000364520 107 ntBASIC1.7□□□□□ -2.14
HCN1O60741 SNORA16.1-201ENST00000364597 132 ntBASIC1.7□□□□□ -2.14
HCN1O60741 RNU6-234P-201ENST00000365229 104 ntBASIC1.7□□□□□ -2.14
HCN1O60741 Y_RNA.372-201ENST00000365599 102 ntBASIC1.7□□□□□ -2.14
HCN1O60741 Y_RNA.378-201ENST00000365652 113 ntBASIC1.7□□□□□ -2.14
HCN1O60741 MIR514A2-201ENST00000385131 88 ntBASIC1.7□□□□□ -2.14
HCN1O60741 MIR514A3-201ENST00000385132 88 ntBASIC1.7□□□□□ -2.14
HCN1O60741 RNA5SP212-201ENST00000391223 107 ntBASIC1.7□□□□□ -2.14
HCN1O60741 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.7□□□□□ -2.14
HCN1O60741 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.7□□□□□ -2.14
HCN1O60741 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.7□□□□□ -2.14
HCN1O60741 AC244670.1-201ENST00000436879 112 ntBASIC1.7□□□□□ -2.14
HCN1O60741 SEPT14P3-201ENST00000439401 183 ntBASIC1.7□□□□□ -2.14
HCN1O60741 AL732372.2-207ENST00000445840 183 ntBASIC1.7□□□□□ -2.14
HCN1O60741 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.7□□□□□ -2.14
HCN1O60741 MTND3P16-201ENST00000452205 344 ntBASIC1.7□□□□□ -2.14
HCN1O60741 SEPT14P2-201ENST00000453405 183 ntBASIC1.7□□□□□ -2.14
HCN1O60741 Y_RNA.654-201ENST00000497848 106 ntBASIC1.7□□□□□ -2.14
HCN1O60741 AC091874.1-201ENST00000511402 339 ntBASIC1.7□□□□□ -2.14
HCN1O60741 SEPT14P4-201ENST00000513445 186 ntBASIC1.7□□□□□ -2.14
HCN1O60741 MIR449C-201ENST00000516047 92 ntBASIC1.7□□□□□ -2.14
HCN1O60741 Y_RNA.704-201ENST00000516851 102 ntBASIC1.7□□□□□ -2.14
HCN1O60741 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.7□□□□□ -2.14
HCN1O60741 FO082796.1-201ENST00000523795 183 ntBASIC1.7□□□□□ -2.14
HCN1O60741 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.7□□□□□ -2.14
HCN1O60741 AC092747.3-201ENST00000603769 301 ntBASIC1.7□□□□□ -2.14
HCN1O60741 AL359314.1-201ENST00000616913 261 ntBASIC1.7□□□□□ -2.14
HCN1O60741 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
HCN1O60741 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HCN1O60741 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.69□□□□□ -2.14
HCN1O60741 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
HCN1O60741 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HCN1O60741 RNU6-483P-201ENST00000384088 108 ntBASIC1.69□□□□□ -2.14
HCN1O60741 SNORA8-201ENST00000384574 139 ntBASIC1.69□□□□□ -2.14
HCN1O60741 SNORD116-4-201ENST00000384733 96 ntBASIC1.69□□□□□ -2.14
HCN1O60741 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.69□□□□□ -2.14
HCN1O60741 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HCN1O60741 ARL5AP1-201ENST00000418991 388 ntBASIC1.69□□□□□ -2.14
HCN1O60741 AL590135.1-201ENST00000422215 156 ntBASIC1.69□□□□□ -2.14
HCN1O60741 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.69□□□□□ -2.14
HCN1O60741 AC019205.3-201ENST00000424573 156 ntBASIC1.69□□□□□ -2.14
HCN1O60741 AL589823.1-201ENST00000429577 183 ntBASIC1.69□□□□□ -2.14
HCN1O60741 AC016700.2-201ENST00000446011 156 ntBASIC1.69□□□□□ -2.14
HCN1O60741 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.69□□□□□ -2.14
HCN1O60741 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.69□□□□□ -2.14
HCN1O60741 AC104564.1-201ENST00000493028 407 ntBASIC1.69□□□□□ -2.14
HCN1O60741 AC015911.1-201ENST00000495111 156 ntBASIC1.69□□□□□ -2.14
HCN1O60741 AC145146.1-201ENST00000496370 254 ntBASIC1.69□□□□□ -2.14
HCN1O60741 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.69□□□□□ -2.14
HCN1O60741 RPL39P5-202ENST00000512505 151 ntBASIC1.69□□□□□ -2.14
HCN1O60741 RNU6-1281P-201ENST00000516223 105 ntBASIC1.69□□□□□ -2.14
HCN1O60741 RNU6-1069P-201ENST00000516612 133 ntBASIC1.69□□□□□ -2.14
HCN1O60741 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.69□□□□□ -2.14
HCN1O60741 AK6P1-201ENST00000540219 478 ntBASIC1.69□□□□□ -2.14
HCN1O60741 HSPE1P4-201ENST00000550617 308 ntBASIC1.69□□□□□ -2.14
HCN1O60741 AC007375.1-201ENST00000554513 578 ntBASIC1.69□□□□□ -2.14
HCN1O60741 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.69□□□□□ -2.14
HCN1O60741 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.69□□□□□ -2.14
HCN1O60741 BNIP3P25-201ENST00000596023 559 ntBASIC1.69□□□□□ -2.14
HCN1O60741 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.69□□□□□ -2.14
HCN1O60741 AL162413.1-201ENST00000603198 110 ntBASIC1.69□□□□□ -2.14
HCN1O60741 AL078605.1-201ENST00000603529 500 ntBASIC1.69□□□□□ -2.14
HCN1O60741 AC064807.4-201ENST00000607201 407 ntBASIC1.69□□□□□ -2.14
HCN1O60741 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HCN1O60741 AC068137.3-201ENST00000639191 341 ntBASIC1.69□□□□□ -2.14
HCN1O60741 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HCN1O60741 SNORD32B-201ENST00000364460 84 ntBASIC1.68□□□□□ -2.14
HCN1O60741 BTF3L4P2-201ENST00000392798 346 ntBASIC1.68□□□□□ -2.14
HCN1O60741 MIR1283-2-201ENST00000408621 87 ntBASIC1.68□□□□□ -2.14
HCN1O60741 RNU6-908P-201ENST00000410160 94 ntBASIC1.68□□□□□ -2.14
HCN1O60741 RNU6-1068P-201ENST00000410958 103 ntBASIC1.68□□□□□ -2.14
HCN1O60741 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
HCN1O60741 AL590556.1-201ENST00000423231 483 ntBASIC1.68□□□□□ -2.14
HCN1O60741 BX510359.4-201ENST00000423750 193 ntBASIC1.68□□□□□ -2.14
HCN1O60741 CBX3P6-201ENST00000430257 527 ntBASIC1.68□□□□□ -2.14
HCN1O60741 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.68□□□□□ -2.14
HCN1O60741 RNU6-1208P-201ENST00000459588 107 ntBASIC1.68□□□□□ -2.14
HCN1O60741 AC022447.4-201ENST00000504053 364 ntBASIC1.68□□□□□ -2.14
HCN1O60741 PTP4A1P4-201ENST00000512479 322 ntBASIC1.68□□□□□ -2.14
HCN1O60741 RNU6-720P-201ENST00000516363 108 ntBASIC1.68□□□□□ -2.14
HCN1O60741 RNU6-314P-201ENST00000516574 104 ntBASIC1.68□□□□□ -2.14
HCN1O60741 SNORD60.2-201ENST00000516883 86 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms