Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RNU6-784P-201ENST00000384330 106 ntBASIC2.09□□□□□ -2.07
SNX3O60493 MIR221-201ENST00000385135 110 ntBASIC2.09□□□□□ -2.07
SNX3O60493 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SNX3O60493 FGF7P8-201ENST00000402994 292 ntBASIC2.09□□□□□ -2.07
SNX3O60493 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.09□□□□□ -2.07
SNX3O60493 AC012306.1-201ENST00000423267 114 ntBASIC2.09□□□□□ -2.07
SNX3O60493 CBX3P6-201ENST00000430257 527 ntBASIC2.09□□□□□ -2.07
SNX3O60493 AL353572.1-201ENST00000442490 417 ntBASIC2.09□□□□□ -2.07
SNX3O60493 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SNX3O60493 snoU13.6-201ENST00000458785 104 ntBASIC2.09□□□□□ -2.07
SNX3O60493 RPL31P58-201ENST00000469001 379 ntBASIC2.09□□□□□ -2.07
SNX3O60493 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.09□□□□□ -2.07
SNX3O60493 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.09□□□□□ -2.07
SNX3O60493 HMGB3P3-201ENST00000510526 400 ntBASIC2.09□□□□□ -2.07
SNX3O60493 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.09□□□□□ -2.07
SNX3O60493 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.09□□□□□ -2.07
SNX3O60493 AC118273.2-201ENST00000532092 465 ntBASIC2.09□□□□□ -2.07
SNX3O60493 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SNX3O60493 AC233702.2-202ENST00000562547 291 ntBASIC2.09□□□□□ -2.07
SNX3O60493 CYP4A27P-201ENST00000567218 190 ntBASIC2.09□□□□□ -2.07
SNX3O60493 RPS3AP23-202ENST00000574601 686 ntBASIC2.09□□□□□ -2.07
SNX3O60493 MIR4790-201ENST00000577799 79 ntBASIC2.09□□□□□ -2.07
SNX3O60493 FGF7P1-201ENST00000582820 288 ntBASIC2.09□□□□□ -2.07
SNX3O60493 POLR3GP2-201ENST00000588366 668 ntBASIC2.09□□□□□ -2.07
SNX3O60493 AC124303.1-201ENST00000605703 360 ntBASIC2.09□□□□□ -2.07
SNX3O60493 PCGEM1.1-201ENST00000613431 131 ntBASIC2.09□□□□□ -2.07
SNX3O60493 AL132822.1-201ENST00000617063 513 ntBASIC2.09□□□□□ -2.07
SNX3O60493 AC005858.4-201ENST00000623191 700 ntBASIC2.09□□□□□ -2.07
SNX3O60493 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SNX3O60493 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.09□□□□□ -2.08
SNX3O60493 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SNX3O60493 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.08□□□□□ -2.08
SNX3O60493 RNA5SP68-201ENST00000363885 119 ntBASIC2.08□□□□□ -2.08
SNX3O60493 RNA5SP387-201ENST00000364226 106 ntBASIC2.08□□□□□ -2.08
SNX3O60493 Y_RNA.279-201ENST00000364763 95 ntBASIC2.08□□□□□ -2.08
SNX3O60493 Y_RNA.333-201ENST00000365274 102 ntBASIC2.08□□□□□ -2.08
SNX3O60493 RNU6-1286P-201ENST00000383871 107 ntBASIC2.08□□□□□ -2.08
SNX3O60493 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SNX3O60493 EDDM3CP-201ENST00000415977 425 ntBASIC2.08□□□□□ -2.08
SNX3O60493 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.08□□□□□ -2.08
SNX3O60493 DAP3P1-201ENST00000441522 278 ntBASIC2.08□□□□□ -2.08
SNX3O60493 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.08□□□□□ -2.08
SNX3O60493 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.08□□□□□ -2.08
SNX3O60493 AC005741.1-201ENST00000511094 432 ntBASIC2.08□□□□□ -2.08
SNX3O60493 MIR449C-201ENST00000516047 92 ntBASIC2.08□□□□□ -2.08
SNX3O60493 RNU6-567P-201ENST00000516746 107 ntBASIC2.08□□□□□ -2.08
SNX3O60493 HSPE1P18-201ENST00000517602 280 ntBASIC2.08□□□□□ -2.08
SNX3O60493 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.08□□□□□ -2.08
SNX3O60493 NDUFA5P6-201ENST00000542110 379 ntBASIC2.08□□□□□ -2.08
SNX3O60493 AC016256.1-201ENST00000547971 354 ntBASIC2.08□□□□□ -2.08
SNX3O60493 AC109446.1-201ENST00000566172 220 ntBASIC2.08□□□□□ -2.08
SNX3O60493 MIR3126-201ENST00000577443 74 ntBASIC2.08□□□□□ -2.08
SNX3O60493 AC245884.12-201ENST00000615364 59 ntBASIC2.08□□□□□ -2.08
SNX3O60493 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.08□□□□□ -2.08
SNX3O60493 MIR1248-201ENST00000629190 106 ntBASIC2.08□□□□□ -2.08
SNX3O60493 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.08□□□□□ -2.08
SNX3O60493 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SNX3O60493 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.07□□□□□ -2.08
SNX3O60493 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.07□□□□□ -2.08
SNX3O60493 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
SNX3O60493 SNORD50.1-201ENST00000362987 71 ntBASIC2.07□□□□□ -2.08
SNX3O60493 RNU5B-2P-201ENST00000363036 113 ntBASIC2.07□□□□□ -2.08
SNX3O60493 RNU6-743P-201ENST00000364151 106 ntBASIC2.07□□□□□ -2.08
SNX3O60493 Y_RNA.390-201ENST00000383932 102 ntBASIC2.07□□□□□ -2.08
SNX3O60493 RNU6-968P-201ENST00000384076 107 ntBASIC2.07□□□□□ -2.08
SNX3O60493 RNU6-767P-201ENST00000384132 107 ntBASIC2.07□□□□□ -2.08
SNX3O60493 MIR208B-201ENST00000401172 77 ntBASIC2.07□□□□□ -2.08
SNX3O60493 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.07□□□□□ -2.08
SNX3O60493 FTH1P25-201ENST00000447665 469 ntBASIC2.07□□□□□ -2.08
SNX3O60493 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.07□□□□□ -2.08
SNX3O60493 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.07□□□□□ -2.08
SNX3O60493 RN7SL274P-201ENST00000492268 272 ntBASIC2.07□□□□□ -2.08
SNX3O60493 MTND5P5-201ENST00000503764 376 ntBASIC2.07□□□□□ -2.08
SNX3O60493 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.07□□□□□ -2.08
SNX3O60493 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.07□□□□□ -2.08
SNX3O60493 GTF3AP2-201ENST00000557014 266 ntBASIC2.07□□□□□ -2.08
SNX3O60493 ANP32BP3-201ENST00000559213 706 ntBASIC2.07□□□□□ -2.08
SNX3O60493 AL022345.1-201ENST00000607292 135 ntBASIC2.07□□□□□ -2.08
SNX3O60493 AC098657.3-201ENST00000620434 263 ntBASIC2.07□□□□□ -2.08
SNX3O60493 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.07□□□□□ -2.08
SNX3O60493 ZNF658B-202ENST00000615961 3375 ntBASIC2.07□□□□□ -2.08
SNX3O60493 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
SNX3O60493 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SNX3O60493 U3.9-201ENST00000363823 204 ntBASIC2.06□□□□□ -2.08
SNX3O60493 RNU6-611P-201ENST00000384276 104 ntBASIC2.06□□□□□ -2.08
SNX3O60493 MIR1294-201ENST00000408503 142 ntBASIC2.06□□□□□ -2.08
SNX3O60493 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.06□□□□□ -2.08
SNX3O60493 RPL21P111-201ENST00000418453 477 ntBASIC2.06□□□□□ -2.08
SNX3O60493 AL139396.1-201ENST00000421137 167 ntBASIC2.06□□□□□ -2.08
SNX3O60493 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.06□□□□□ -2.08
SNX3O60493 AC079354.2-201ENST00000453523 154 ntBASIC2.06□□□□□ -2.08
SNX3O60493 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.06□□□□□ -2.08
SNX3O60493 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.06□□□□□ -2.08
SNX3O60493 PRDX4P1-201ENST00000507189 574 ntBASIC2.06□□□□□ -2.08
SNX3O60493 AC046134.1-201ENST00000514454 666 ntBASIC2.06□□□□□ -2.08
SNX3O60493 RNU7-30P-201ENST00000516835 62 ntBASIC2.06□□□□□ -2.08
SNX3O60493 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.06□□□□□ -2.08
SNX3O60493 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.06□□□□□ -2.08
SNX3O60493 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.06□□□□□ -2.08
SNX3O60493 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms