Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RPS29P23-201ENST00000458635 123 ntBASIC1.35□□□□□ -2.19
CHMP2AO43633 RNU7-182P-201ENST00000459009 62 ntBASIC1.35□□□□□ -2.19
CHMP2AO43633 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.35□□□□□ -2.19
CHMP2AO43633 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.35□□□□□ -2.19
CHMP2AO43633 MTND1P22-201ENST00000510572 951 ntBASIC1.35□□□□□ -2.19
CHMP2AO43633 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.35□□□□□ -2.19
CHMP2AO43633 RNU6-377P-201ENST00000515965 102 ntBASIC1.35□□□□□ -2.19
CHMP2AO43633 SNORA25.17-201ENST00000517184 124 ntBASIC1.35□□□□□ -2.19
CHMP2AO43633 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CHMP2AO43633 AP005597.4-201ENST00000526762 229 ntBASIC1.35□□□□□ -2.19
CHMP2AO43633 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.35□□□□□ -2.19
CHMP2AO43633 MIR5094-201ENST00000578766 85 ntBASIC1.35□□□□□ -2.19
CHMP2AO43633 MIR3682-201ENST00000581338 84 ntBASIC1.35□□□□□ -2.19
CHMP2AO43633 AC040904.1-201ENST00000590850 223 ntBASIC1.35□□□□□ -2.19
CHMP2AO43633 Z94722.1-201ENST00000604328 474 ntBASIC1.35□□□□□ -2.19
CHMP2AO43633 AP000654.2-201ENST00000605633 586 ntBASIC1.35□□□□□ -2.19
CHMP2AO43633 AL603755.1-201ENST00000619504 163 ntBASIC1.35□□□□□ -2.19
CHMP2AO43633 SEPT14P19-203ENST00000633205 211 ntBASIC1.35□□□□□ -2.19
CHMP2AO43633 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.35□□□□□ -2.19
CHMP2AO43633 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CHMP2AO43633 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
CHMP2AO43633 Y_RNA.159-201ENST00000363674 87 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 RNU6-392P-201ENST00000364926 101 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 RNU6-827P-201ENST00000365553 106 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 RNU6-108P-201ENST00000365558 107 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.34□□□□□ -2.19
CHMP2AO43633 MTCYBP8-201ENST00000422855 651 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.34□□□□□ -2.19
CHMP2AO43633 AC010975.2-201ENST00000427781 588 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 AL135790.2-201ENST00000437701 267 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 USP9YP29-201ENST00000445112 563 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 PRPS1P1-201ENST00000445305 876 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 AC079781.2-201ENST00000446424 169 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 C1DP4-201ENST00000455429 424 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.34□□□□□ -2.19
CHMP2AO43633 AC006026.2-201ENST00000457376 180 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 SCARNA18-201ENST00000459004 134 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 AC099513.1-201ENST00000490423 301 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.34□□□□□ -2.19
CHMP2AO43633 ATP5EP1-201ENST00000510257 156 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 AC104136.1-201ENST00000512969 394 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 RNA5SP490-201ENST00000517141 136 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 AC023050.3-201ENST00000541142 333 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 SUB1P2-201ENST00000556401 297 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 AC145350.1-201ENST00000567426 208 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 SNORA59B-202ENST00000578183 701 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 MTATP6P3-201ENST00000581686 676 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 AL034555.1-201ENST00000604816 211 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 AC006566.1-201ENST00000608943 513 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 MIR8063-201ENST00000621930 81 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 SNORD98-201ENST00000636377 67 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 AC068205.3-201ENST00000636385 468 ntBASIC1.34□□□□□ -2.19
CHMP2AO43633 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
CHMP2AO43633 MIR340-201ENST00000362125 95 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 RNU6-112P-201ENST00000363599 104 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 SNORD32B-201ENST00000364460 84 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 RNU4-48P-201ENST00000365559 182 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 RNU6-393P-201ENST00000384475 107 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 SNORA12.2-201ENST00000391040 156 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 MIR1267-201ENST00000408723 78 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.33□□□□□ -2.2
CHMP2AO43633 AC133104.1-201ENST00000429100 218 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 MTCO2P11-201ENST00000431069 680 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.33□□□□□ -2.2
CHMP2AO43633 MTCO1P44-201ENST00000441935 243 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 HMGN2P18-201ENST00000450680 270 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 AC112492.4-201ENST00000456549 352 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.33□□□□□ -2.2
CHMP2AO43633 AC087477.1-201ENST00000465747 340 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 AP001893.2-201ENST00000526949 202 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 MTND3P12-201ENST00000559068 328 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 SNORA77B-201ENST00000578179 125 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.33□□□□□ -2.2
CHMP2AO43633 AC012507.3-201ENST00000603556 477 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 AC245014.2-201ENST00000603689 287 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 AC246785.4-201ENST00000605374 287 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 AC080078.3-201ENST00000605407 463 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 AC008945.2-201ENST00000606056 604 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 LINC02555-201ENST00000563933 1951 ntBASIC1.33□□□□□ -2.2
CHMP2AO43633 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.33□□□□□ -2.2
CHMP2AO43633 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
CHMP2AO43633 RNY1P10-201ENST00000363268 113 ntBASIC1.32□□□□□ -2.2
CHMP2AO43633 RNU6-414P-201ENST00000363705 104 ntBASIC1.32□□□□□ -2.2
CHMP2AO43633 RNU6-266P-201ENST00000364225 107 ntBASIC1.32□□□□□ -2.2
CHMP2AO43633 SNORD32A-201ENST00000364805 84 ntBASIC1.32□□□□□ -2.2
CHMP2AO43633 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CHMP2AO43633 SNORD26-201ENST00000384147 75 ntBASIC1.32□□□□□ -2.2
CHMP2AO43633 RNU6-1222P-201ENST00000384615 107 ntBASIC1.32□□□□□ -2.2
CHMP2AO43633 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.32□□□□□ -2.2
CHMP2AO43633 AL357139.1-201ENST00000407792 426 ntBASIC1.32□□□□□ -2.2
CHMP2AO43633 RPL21P111-201ENST00000418453 477 ntBASIC1.32□□□□□ -2.2
CHMP2AO43633 AL117339.3-201ENST00000418733 162 ntBASIC1.32□□□□□ -2.2
CHMP2AO43633 AL590135.1-201ENST00000422215 156 ntBASIC1.32□□□□□ -2.2
CHMP2AO43633 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.32□□□□□ -2.2
CHMP2AO43633 AC019205.3-201ENST00000424573 156 ntBASIC1.32□□□□□ -2.2
CHMP2AO43633 AL121601.2-201ENST00000438019 707 ntBASIC1.32□□□□□ -2.2
CHMP2AO43633 AC016700.2-201ENST00000446011 156 ntBASIC1.32□□□□□ -2.2
CHMP2AO43633 RNA5SP269-201ENST00000459032 137 ntBASIC1.32□□□□□ -2.2
CHMP2AO43633 AC015911.1-201ENST00000495111 156 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms