Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 MIR561-201ENST00000385216 97 ntBASIC2.28□□□□□ -2.04
TO15178 AL359511.1-201ENST00000402970 211 ntBASIC2.28□□□□□ -2.04
TO15178 HMGB3P2-201ENST00000411913 584 ntBASIC2.28□□□□□ -2.04
TO15178 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.28□□□□□ -2.04
TO15178 RPL37P10-201ENST00000412884 288 ntBASIC2.28□□□□□ -2.04
TO15178 Z82205.1-201ENST00000428456 297 ntBASIC2.28□□□□□ -2.04
TO15178 AC068781.1-201ENST00000488231 618 ntBASIC2.28□□□□□ -2.04
TO15178 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.28□□□□□ -2.04
TO15178 AC107222.1-201ENST00000510899 637 ntBASIC2.28□□□□□ -2.04
TO15178 RNU7-193P-201ENST00000516723 65 ntBASIC2.28□□□□□ -2.04
TO15178 SNORA31.16-201ENST00000516773 139 ntBASIC2.28□□□□□ -2.04
TO15178 SNORA48.11-201ENST00000517015 89 ntBASIC2.28□□□□□ -2.04
TO15178 IGLV3-17-201ENST00000519099 244 ntBASIC2.28□□□□□ -2.04
TO15178 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.28□□□□□ -2.04
TO15178 CBX3P7-201ENST00000532876 502 ntBASIC2.28□□□□□ -2.04
TO15178 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.28□□□□□ -2.04
TO15178 MIR3923-201ENST00000579521 83 ntBASIC2.28□□□□□ -2.04
TO15178 U4atac.1-201ENST00000618345 95 ntBASIC2.28□□□□□ -2.04
TO15178 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.28□□□□□ -2.04
TO15178 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.28□□□□□ -2.04
TO15178 AL365361.1-201ENST00000566942 3481 ntBASIC2.28□□□□□ -2.04
TO15178 AC007336.1-201ENST00000576365 3828 ntBASIC2.28□□□□□ -2.04
TO15178 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TO15178 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.27□□□□□ -2.05
TO15178 AP006437.1-201ENST00000641440 3685 ntBASIC2.27□□□□□ -2.05
TO15178 AL136360.1-201ENST00000503377 1900 ntBASIC2.27□□□□□ -2.05
TO15178 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TO15178 RNU6-596P-201ENST00000365395 98 ntBASIC2.27□□□□□ -2.05
TO15178 RNU6-1286P-201ENST00000383871 107 ntBASIC2.27□□□□□ -2.05
TO15178 RNU6-968P-201ENST00000384076 107 ntBASIC2.27□□□□□ -2.05
TO15178 RNY3P14-201ENST00000384309 102 ntBASIC2.27□□□□□ -2.05
TO15178 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
TO15178 AL591034.2-201ENST00000402839 359 ntBASIC2.27□□□□□ -2.05
TO15178 AL355497.1-201ENST00000406262 551 ntBASIC2.27□□□□□ -2.05
TO15178 MTND4LP11-201ENST00000422184 280 ntBASIC2.27□□□□□ -2.05
TO15178 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.27□□□□□ -2.05
TO15178 MTND5P20-201ENST00000448677 143 ntBASIC2.27□□□□□ -2.05
TO15178 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.27□□□□□ -2.05
TO15178 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.27□□□□□ -2.05
TO15178 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.27□□□□□ -2.05
TO15178 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.27□□□□□ -2.05
TO15178 CYP4A27P-201ENST00000567218 190 ntBASIC2.27□□□□□ -2.05
TO15178 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.27□□□□□ -2.05
TO15178 MIR4273-201ENST00000582824 84 ntBASIC2.27□□□□□ -2.05
TO15178 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.27□□□□□ -2.05
TO15178 CTSLP2-204ENST00000629029 392 ntBASIC2.27□□□□□ -2.05
TO15178 AC099654.5-201ENST00000636479 350 ntBASIC2.27□□□□□ -2.05
TO15178 AL450472.1-202ENST00000637286 180 ntBASIC2.27□□□□□ -2.05
TO15178 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
TO15178 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.26□□□□□ -2.05
TO15178 MTND4P12-201ENST00000498999 1377 ntBASIC2.26□□□□□ -2.05
TO15178 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TO15178 RNU4-15P-201ENST00000362613 141 ntBASIC2.26□□□□□ -2.05
TO15178 Y_RNA.142-201ENST00000363491 102 ntBASIC2.26□□□□□ -2.05
TO15178 Y_RNA.482-201ENST00000384377 111 ntBASIC2.26□□□□□ -2.05
TO15178 RNU6-1274P-201ENST00000384557 107 ntBASIC2.26□□□□□ -2.05
TO15178 SNORA41-201ENST00000384675 132 ntBASIC2.26□□□□□ -2.05
TO15178 AL356432.1-201ENST00000405809 419 ntBASIC2.26□□□□□ -2.05
TO15178 EIF4EP2-201ENST00000422816 654 ntBASIC2.26□□□□□ -2.05
TO15178 AC012306.1-201ENST00000423267 114 ntBASIC2.26□□□□□ -2.05
TO15178 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.26□□□□□ -2.05
TO15178 FTH1P25-201ENST00000447665 469 ntBASIC2.26□□□□□ -2.05
TO15178 AL513124.1-201ENST00000450410 614 ntBASIC2.26□□□□□ -2.05
TO15178 SNORD5.1-201ENST00000458800 75 ntBASIC2.26□□□□□ -2.05
TO15178 AC145146.1-201ENST00000496370 254 ntBASIC2.26□□□□□ -2.05
TO15178 RNU6-1016P-201ENST00000516689 94 ntBASIC2.26□□□□□ -2.05
TO15178 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.26□□□□□ -2.05
TO15178 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.26□□□□□ -2.05
TO15178 AL078605.1-201ENST00000603529 500 ntBASIC2.26□□□□□ -2.05
TO15178 Z98751.3-201ENST00000604447 521 ntBASIC2.26□□□□□ -2.05
TO15178 AC025253.1-201ENST00000613623 543 ntBASIC2.26□□□□□ -2.05
TO15178 AC063943.3-201ENST00000615562 356 ntBASIC2.26□□□□□ -2.05
TO15178 AC092794.2-201ENST00000620933 563 ntBASIC2.26□□□□□ -2.05
TO15178 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TO15178 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
TO15178 AC080100.1-201ENST00000624239 5356 ntBASIC2.26□□□□□ -2.05
TO15178 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.25□□□□□ -2.05
TO15178 AC233981.2-201ENST00000611524 1614 ntBASIC2.25□□□□□ -2.05
TO15178 SNORA29-201ENST00000384183 140 ntBASIC2.25□□□□□ -2.05
TO15178 SNORA36A-201ENST00000384221 132 ntBASIC2.25□□□□□ -2.05
TO15178 MTCYBP2-201ENST00000407745 171 ntBASIC2.25□□□□□ -2.05
TO15178 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.25□□□□□ -2.05
TO15178 USP9YP30-201ENST00000430729 455 ntBASIC2.25□□□□□ -2.05
TO15178 MTATP6P23-201ENST00000440153 476 ntBASIC2.25□□□□□ -2.05
TO15178 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.25□□□□□ -2.05
TO15178 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.25□□□□□ -2.05
TO15178 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.25□□□□□ -2.05
TO15178 AC091951.2-201ENST00000500762 203 ntBASIC2.25□□□□□ -2.05
TO15178 Y_RNA.702-201ENST00000516843 96 ntBASIC2.25□□□□□ -2.05
TO15178 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.25□□□□□ -2.05
TO15178 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.25□□□□□ -2.05
TO15178 CYCSP26-201ENST00000534107 320 ntBASIC2.25□□□□□ -2.05
TO15178 MRPS36P4-201ENST00000534436 298 ntBASIC2.25□□□□□ -2.05
TO15178 PRELID2P1-201ENST00000552837 301 ntBASIC2.25□□□□□ -2.05
TO15178 MIR1291-201ENST00000627649 87 ntBASIC2.25□□□□□ -2.05
TO15178 AC243829.7-201ENST00000633081 225 ntBASIC2.25□□□□□ -2.05
TO15178 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.25□□□□□ -2.05
TO15178 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.24□□□□□ -2.05
TO15178 MTND5P9-201ENST00000503854 1755 ntBASIC2.24□□□□□ -2.05
TO15178 SNORD50.1-201ENST00000362987 71 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms