Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 snoU13.23-201ENST00000458863 104 ntBASIC1.29□□□□□ -2.2
LSM1O15116 SNRPGP7-201ENST00000469016 106 ntBASIC1.29□□□□□ -2.2
LSM1O15116 MTCYBP18-201ENST00000501056 747 ntBASIC1.29□□□□□ -2.2
LSM1O15116 AC016632.1-201ENST00000503994 196 ntBASIC1.29□□□□□ -2.2
LSM1O15116 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.29□□□□□ -2.2
LSM1O15116 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.29□□□□□ -2.2
LSM1O15116 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.29□□□□□ -2.2
LSM1O15116 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.29□□□□□ -2.2
LSM1O15116 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.29□□□□□ -2.2
LSM1O15116 AC008015.1-201ENST00000555505 465 ntBASIC1.29□□□□□ -2.2
LSM1O15116 CYP4A27P-201ENST00000567218 190 ntBASIC1.29□□□□□ -2.2
LSM1O15116 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.29□□□□□ -2.2
LSM1O15116 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.29□□□□□ -2.2
LSM1O15116 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.29□□□□□ -2.2
LSM1O15116 AP003465.2-201ENST00000602571 373 ntBASIC1.29□□□□□ -2.2
LSM1O15116 AP001836.1-201ENST00000604675 523 ntBASIC1.29□□□□□ -2.2
LSM1O15116 AC064872.1-201ENST00000604823 1072 ntBASIC1.29□□□□□ -2.2
LSM1O15116 RPL17P51-201ENST00000605218 238 ntBASIC1.29□□□□□ -2.2
LSM1O15116 AL050343.2-201ENST00000607338 280 ntBASIC1.29□□□□□ -2.2
LSM1O15116 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
LSM1O15116 RNU6-552P-201ENST00000362869 119 ntBASIC1.28□□□□□ -2.2
LSM1O15116 RNU6-203P-201ENST00000384038 104 ntBASIC1.28□□□□□ -2.2
LSM1O15116 SNORA40.3-201ENST00000390964 122 ntBASIC1.28□□□□□ -2.2
LSM1O15116 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
LSM1O15116 AC010099.3-201ENST00000423896 409 ntBASIC1.28□□□□□ -2.2
LSM1O15116 AL135790.2-201ENST00000437701 267 ntBASIC1.28□□□□□ -2.2
LSM1O15116 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.28□□□□□ -2.2
LSM1O15116 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.28□□□□□ -2.2
LSM1O15116 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.28□□□□□ -2.2
LSM1O15116 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.28□□□□□ -2.2
LSM1O15116 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.28□□□□□ -2.2
LSM1O15116 ATP5J2P3-201ENST00000451550 258 ntBASIC1.28□□□□□ -2.2
LSM1O15116 RPL31P3-201ENST00000458430 332 ntBASIC1.28□□□□□ -2.2
LSM1O15116 AC008628.2-201ENST00000502605 298 ntBASIC1.28□□□□□ -2.2
LSM1O15116 HMGN1P13-201ENST00000505795 138 ntBASIC1.28□□□□□ -2.2
LSM1O15116 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.28□□□□□ -2.2
LSM1O15116 RNU6-759P-201ENST00000516740 103 ntBASIC1.28□□□□□ -2.2
LSM1O15116 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.28□□□□□ -2.2
LSM1O15116 AC103996.1-201ENST00000555468 102 ntBASIC1.28□□□□□ -2.2
LSM1O15116 AC019288.1-201ENST00000557918 224 ntBASIC1.28□□□□□ -2.2
LSM1O15116 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.28□□□□□ -2.2
LSM1O15116 AC015688.6-201ENST00000577737 104 ntBASIC1.28□□□□□ -2.2
LSM1O15116 MIR3908-201ENST00000579798 126 ntBASIC1.28□□□□□ -2.2
LSM1O15116 AC069114.2-201ENST00000604699 304 ntBASIC1.28□□□□□ -2.2
LSM1O15116 MIR98-201ENST00000606724 119 ntBASIC1.28□□□□□ -2.2
LSM1O15116 AC010615.1-201ENST00000594254 1764 ntBASIC1.28□□□□□ -2.2
LSM1O15116 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.28□□□□□ -2.2
LSM1O15116 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
LSM1O15116 RNU6-862P-201ENST00000362804 105 ntBASIC1.27□□□□□ -2.21
LSM1O15116 RNU6-266P-201ENST00000364225 107 ntBASIC1.27□□□□□ -2.21
LSM1O15116 RNU6-1019P-201ENST00000364424 107 ntBASIC1.27□□□□□ -2.21
LSM1O15116 RNU6-282P-201ENST00000365357 103 ntBASIC1.27□□□□□ -2.21
LSM1O15116 RNU6-827P-201ENST00000365553 106 ntBASIC1.27□□□□□ -2.21
LSM1O15116 RNU6-438P-201ENST00000365561 103 ntBASIC1.27□□□□□ -2.21
LSM1O15116 RNU6-606P-201ENST00000384721 111 ntBASIC1.27□□□□□ -2.21
LSM1O15116 MIR194-1-201ENST00000384892 85 ntBASIC1.27□□□□□ -2.21
LSM1O15116 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.27□□□□□ -2.21
LSM1O15116 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.27□□□□□ -2.21
LSM1O15116 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.27□□□□□ -2.21
LSM1O15116 AC007395.1-201ENST00000451333 677 ntBASIC1.27□□□□□ -2.21
LSM1O15116 RNU7-14P-201ENST00000459331 62 ntBASIC1.27□□□□□ -2.21
LSM1O15116 AC079140.5-201ENST00000507882 310 ntBASIC1.27□□□□□ -2.21
LSM1O15116 AC079140.3-201ENST00000511111 550 ntBASIC1.27□□□□□ -2.21
LSM1O15116 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.27□□□□□ -2.21
LSM1O15116 AP003033.1-201ENST00000527244 415 ntBASIC1.27□□□□□ -2.21
LSM1O15116 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.27□□□□□ -2.21
LSM1O15116 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.27□□□□□ -2.21
LSM1O15116 MIR4303-201ENST00000581299 66 ntBASIC1.27□□□□□ -2.21
LSM1O15116 VN1R80P-201ENST00000597126 338 ntBASIC1.27□□□□□ -2.21
LSM1O15116 AC245014.2-201ENST00000603689 287 ntBASIC1.27□□□□□ -2.21
LSM1O15116 AC246785.4-201ENST00000605374 287 ntBASIC1.27□□□□□ -2.21
LSM1O15116 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.27□□□□□ -2.21
LSM1O15116 AL360219.1-201ENST00000610230 366 ntBASIC1.27□□□□□ -2.21
LSM1O15116 AC122133.1-201ENST00000613964 233 ntBASIC1.27□□□□□ -2.21
LSM1O15116 MIR8063-201ENST00000621930 81 ntBASIC1.27□□□□□ -2.21
LSM1O15116 ICE2P2-201ENST00000483823 2787 ntBASIC1.27□□□□□ -2.21
LSM1O15116 AL159152.1-201ENST00000635019 2587 ntBASIC1.27□□□□□ -2.21
LSM1O15116 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
LSM1O15116 AP000275.1-201ENST00000411943 390 ntBASIC1.26□□□□□ -2.21
LSM1O15116 MRPL35P3-201ENST00000421557 364 ntBASIC1.26□□□□□ -2.21
LSM1O15116 FTH1P12-201ENST00000432137 551 ntBASIC1.26□□□□□ -2.21
LSM1O15116 AC002486.1-201ENST00000435098 391 ntBASIC1.26□□□□□ -2.21
LSM1O15116 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.26□□□□□ -2.21
LSM1O15116 AL133217.1-201ENST00000450980 425 ntBASIC1.26□□□□□ -2.21
LSM1O15116 RNU1-123P-201ENST00000458950 160 ntBASIC1.26□□□□□ -2.21
LSM1O15116 AC108210.2-201ENST00000503681 201 ntBASIC1.26□□□□□ -2.21
LSM1O15116 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.26□□□□□ -2.21
LSM1O15116 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.26□□□□□ -2.21
LSM1O15116 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.26□□□□□ -2.21
LSM1O15116 RNU6-856P-201ENST00000516959 98 ntBASIC1.26□□□□□ -2.21
LSM1O15116 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.26□□□□□ -2.21
LSM1O15116 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
LSM1O15116 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.26□□□□□ -2.21
LSM1O15116 AC021231.3-201ENST00000558497 370 ntBASIC1.26□□□□□ -2.21
LSM1O15116 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.26□□□□□ -2.21
LSM1O15116 AC109446.2-201ENST00000567872 497 ntBASIC1.26□□□□□ -2.21
LSM1O15116 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.26□□□□□ -2.21
LSM1O15116 AL353149.1-201ENST00000610667 244 ntBASIC1.26□□□□□ -2.21
LSM1O15116 AL121890.5-201ENST00000620848 304 ntBASIC1.26□□□□□ -2.21
LSM1O15116 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms