Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SNORA32.3-201ENST00000384772 121 ntBASIC-0.17□□□□□ -2.44
CHD1O14646 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
CHD1O14646 RAP1BP3-201ENST00000407180 549 ntBASIC-0.17□□□□□ -2.44
CHD1O14646 MIR1305-201ENST00000408300 86 ntBASIC-0.17□□□□□ -2.44
CHD1O14646 MTND1P30-201ENST00000441241 901 ntBASIC-0.17□□□□□ -2.44
CHD1O14646 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.17□□□□□ -2.44
CHD1O14646 RPF2P2-201ENST00000504693 896 ntBASIC-0.17□□□□□ -2.44
CHD1O14646 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.17□□□□□ -2.44
CHD1O14646 RNY1P9-201ENST00000532431 109 ntBASIC-0.17□□□□□ -2.44
CHD1O14646 AL358072.1-201ENST00000604156 575 ntBASIC-0.17□□□□□ -2.44
CHD1O14646 AL390208.1-201ENST00000605885 644 ntBASIC-0.17□□□□□ -2.44
CHD1O14646 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.18□□□□□ -2.44
CHD1O14646 RNU6-114P-201ENST00000384704 105 ntBASIC-0.18□□□□□ -2.44
CHD1O14646 MIR518A1-201ENST00000385068 85 ntBASIC-0.18□□□□□ -2.44
CHD1O14646 RPL22P18-201ENST00000417197 377 ntBASIC-0.18□□□□□ -2.44
CHD1O14646 AL139421.1-201ENST00000423010 169 ntBASIC-0.18□□□□□ -2.44
CHD1O14646 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.18□□□□□ -2.44
CHD1O14646 AL008629.1-201ENST00000438615 184 ntBASIC-0.18□□□□□ -2.44
CHD1O14646 RNFT1P2-201ENST00000443064 757 ntBASIC-0.18□□□□□ -2.44
CHD1O14646 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.18□□□□□ -2.44
CHD1O14646 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.18□□□□□ -2.44
CHD1O14646 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.18□□□□□ -2.44
CHD1O14646 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.18□□□□□ -2.44
CHD1O14646 7SK.10-201ENST00000621414 298 ntBASIC-0.18□□□□□ -2.44
CHD1O14646 SNORA27.3-201ENST00000364937 134 ntBASIC-0.18□□□□□ -2.44
CHD1O14646 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.18□□□□□ -2.44
CHD1O14646 RNU6-40P-201ENST00000384254 107 ntBASIC-0.18□□□□□ -2.44
CHD1O14646 MIR601-201ENST00000385256 79 ntBASIC-0.18□□□□□ -2.44
CHD1O14646 RAC1P8-201ENST00000427086 527 ntBASIC-0.18□□□□□ -2.44
CHD1O14646 LARP1BP3-201ENST00000437229 869 ntBASIC-0.18□□□□□ -2.44
CHD1O14646 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.18□□□□□ -2.44
CHD1O14646 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.18□□□□□ -2.44
CHD1O14646 AC106038.2-201ENST00000520706 568 ntBASIC-0.18□□□□□ -2.44
CHD1O14646 AC011195.1-201ENST00000578177 177 ntBASIC-0.18□□□□□ -2.44
CHD1O14646 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.18□□□□□ -2.44
CHD1O14646 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.18□□□□□ -2.44
CHD1O14646 MTND5P16-201ENST00000460269 1703 ntBASIC-0.19□□□□□ -2.44
CHD1O14646 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
CHD1O14646 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.19□□□□□ -2.44
CHD1O14646 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.19□□□□□ -2.44
CHD1O14646 RPL39P39-201ENST00000455840 151 ntBASIC-0.19□□□□□ -2.44
CHD1O14646 AC022364.2-201ENST00000457963 554 ntBASIC-0.19□□□□□ -2.44
CHD1O14646 RNU7-21P-201ENST00000459430 62 ntBASIC-0.19□□□□□ -2.44
CHD1O14646 HMGN1P12-201ENST00000499125 195 ntBASIC-0.19□□□□□ -2.44
CHD1O14646 SNORD60.2-201ENST00000516883 86 ntBASIC-0.19□□□□□ -2.44
CHD1O14646 AC023824.3-201ENST00000569003 562 ntBASIC-0.19□□□□□ -2.44
CHD1O14646 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.2□□□□□ -2.44
CHD1O14646 MIR224-201ENST00000384889 81 ntBASIC-0.2□□□□□ -2.44
CHD1O14646 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.2□□□□□ -2.44
CHD1O14646 RNA5SP451-201ENST00000410588 110 ntBASIC-0.2□□□□□ -2.44
CHD1O14646 RNA5SP222-201ENST00000411039 105 ntBASIC-0.2□□□□□ -2.44
CHD1O14646 MTCO2P1-201ENST00000424648 477 ntBASIC-0.2□□□□□ -2.44
CHD1O14646 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.2□□□□□ -2.44
CHD1O14646 HMGB1P28-201ENST00000507778 552 ntBASIC-0.2□□□□□ -2.44
CHD1O14646 AL391001.1-201ENST00000602747 715 ntBASIC-0.2□□□□□ -2.44
CHD1O14646 MIR1295B-201ENST00000636144 60 ntBASIC-0.2□□□□□ -2.44
CHD1O14646 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC-0.2□□□□□ -2.44
CHD1O14646 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
CHD1O14646 SUGT1P1-201ENST00000379514 476 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 RNU6-72P-201ENST00000384285 79 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 SNORD116-13-201ENST00000384408 92 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 RNU6-1005P-201ENST00000384519 107 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 AC068533.2-201ENST00000411872 306 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 VPS26BP1-201ENST00000417155 755 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 MTND1P20-201ENST00000430341 950 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 USP9YP14-201ENST00000430663 563 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-0.21□□□□□ -2.44
CHD1O14646 AC092427.1-201ENST00000439177 601 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.21□□□□□ -2.44
CHD1O14646 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-0.21□□□□□ -2.44
CHD1O14646 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
CHD1O14646 AC092656.1-203ENST00000624134 423 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 RNY3P5-201ENST00000384127 102 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 MIR938-201ENST00000401216 83 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 NFU1P2-201ENST00000448700 469 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.21□□□□□ -2.44
CHD1O14646 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.21□□□□□ -2.44
CHD1O14646 MTND1P22-201ENST00000510572 951 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC-0.21□□□□□ -2.44
CHD1O14646 AC009902.1-201ENST00000519351 183 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.21□□□□□ -2.44
CHD1O14646 AC090888.2-201ENST00000559765 1144 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 AC025449.1-201ENST00000603896 529 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 AC097065.2-201ENST00000608159 533 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 AC116165.2-201ENST00000616705 206 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 AC100810.6-201ENST00000638068 285 ntBASIC-0.21□□□□□ -2.44
CHD1O14646 AL355796.1-201ENST00000406706 323 ntBASIC-0.22□□□□□ -2.44
CHD1O14646 ELOCP30-201ENST00000447108 299 ntBASIC-0.22□□□□□ -2.44
CHD1O14646 snoU13.25-201ENST00000458945 104 ntBASIC-0.22□□□□□ -2.44
CHD1O14646 HMGB1P30-201ENST00000492455 606 ntBASIC-0.22□□□□□ -2.44
CHD1O14646 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.22□□□□□ -2.44
CHD1O14646 AC025465.4-201ENST00000513422 638 ntBASIC-0.22□□□□□ -2.44
CHD1O14646 AC116347.2-201ENST00000514912 523 ntBASIC-0.22□□□□□ -2.44
CHD1O14646 AC022523.2-201ENST00000561045 150 ntBASIC-0.22□□□□□ -2.44
CHD1O14646 MIR4431-201ENST00000579990 94 ntBASIC-0.22□□□□□ -2.44
CHD1O14646 MIR3136-201ENST00000583498 78 ntBASIC-0.22□□□□□ -2.44
CHD1O14646 AC078795.2-201ENST00000602835 1252 ntBASIC-0.22□□□□□ -2.44
CHD1O14646 AC084824.4-201ENST00000620106 731 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms