Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 SNORA43.2-201ENST00000516652 128 ntBASIC1.99□□□□□ -2.09
CDX4O14627 RNU6-1332P-201ENST00000516666 104 ntBASIC1.99□□□□□ -2.09
CDX4O14627 RNU6-566P-201ENST00000516790 107 ntBASIC1.99□□□□□ -2.09
CDX4O14627 RNU1-104P-201ENST00000517280 175 ntBASIC1.99□□□□□ -2.09
CDX4O14627 AC109479.2-201ENST00000517842 174 ntBASIC1.99□□□□□ -2.09
CDX4O14627 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.99□□□□□ -2.09
CDX4O14627 CYCSP27-201ENST00000527643 293 ntBASIC1.99□□□□□ -2.09
CDX4O14627 AC079598.5-201ENST00000547460 117 ntBASIC1.99□□□□□ -2.09
CDX4O14627 AC025423.5-201ENST00000550230 219 ntBASIC1.99□□□□□ -2.09
CDX4O14627 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.99□□□□□ -2.09
CDX4O14627 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.99□□□□□ -2.09
CDX4O14627 AL355375.2-201ENST00000574825 175 ntBASIC1.99□□□□□ -2.09
CDX4O14627 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.99□□□□□ -2.09
CDX4O14627 MIR1302-1-201ENST00000637932 143 ntBASIC1.99□□□□□ -2.09
CDX4O14627 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.99□□□□□ -2.09
CDX4O14627 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CDX4O14627 Z75746.1-201ENST00000440243 2080 ntBASIC1.98□□□□□ -2.09
CDX4O14627 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.98□□□□□ -2.09
CDX4O14627 Y_RNA.67-201ENST00000362870 100 ntBASIC1.98□□□□□ -2.09
CDX4O14627 SNORD114-19-201ENST00000363072 75 ntBASIC1.98□□□□□ -2.09
CDX4O14627 Y_RNA.212-201ENST00000364177 102 ntBASIC1.98□□□□□ -2.09
CDX4O14627 SNORA67.1-201ENST00000364749 141 ntBASIC1.98□□□□□ -2.09
CDX4O14627 Y_RNA.474-201ENST00000384341 102 ntBASIC1.98□□□□□ -2.09
CDX4O14627 SNORD116-20-201ENST00000384529 92 ntBASIC1.98□□□□□ -2.09
CDX4O14627 MIR218-1-201ENST00000384999 110 ntBASIC1.98□□□□□ -2.09
CDX4O14627 RNU6-1245P-201ENST00000411130 106 ntBASIC1.98□□□□□ -2.09
CDX4O14627 BTF3P4-201ENST00000418852 495 ntBASIC1.98□□□□□ -2.09
CDX4O14627 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.98□□□□□ -2.09
CDX4O14627 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.98□□□□□ -2.09
CDX4O14627 AC124916.1-201ENST00000444020 547 ntBASIC1.98□□□□□ -2.09
CDX4O14627 UBE2V1P7-201ENST00000446395 340 ntBASIC1.98□□□□□ -2.09
CDX4O14627 RPL23AP63-201ENST00000498752 471 ntBASIC1.98□□□□□ -2.09
CDX4O14627 HMGB3P3-201ENST00000510526 400 ntBASIC1.98□□□□□ -2.09
CDX4O14627 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.98□□□□□ -2.09
CDX4O14627 Y_RNA.691-201ENST00000516611 103 ntBASIC1.98□□□□□ -2.09
CDX4O14627 COPS8P3-201ENST00000526024 482 ntBASIC1.98□□□□□ -2.09
CDX4O14627 AC010186.2-204ENST00000537668 439 ntBASIC1.98□□□□□ -2.09
CDX4O14627 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.98□□□□□ -2.09
CDX4O14627 RPS15AP11-201ENST00000594193 385 ntBASIC1.98□□□□□ -2.09
CDX4O14627 AL356575.1-201ENST00000603008 283 ntBASIC1.98□□□□□ -2.09
CDX4O14627 APOOP1-201ENST00000604695 592 ntBASIC1.98□□□□□ -2.09
CDX4O14627 RNU6-85P-201ENST00000605989 107 ntBASIC1.98□□□□□ -2.09
CDX4O14627 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CDX4O14627 AL138726.1-201ENST00000614873 333 ntBASIC1.98□□□□□ -2.09
CDX4O14627 MIR8070-201ENST00000616510 88 ntBASIC1.98□□□□□ -2.09
CDX4O14627 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.98□□□□□ -2.09
CDX4O14627 Z69720.2-201ENST00000624755 279 ntBASIC1.98□□□□□ -2.09
CDX4O14627 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CDX4O14627 AC006026.1-201ENST00000444025 1803 ntBASIC1.98□□□□□ -2.09
CDX4O14627 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CDX4O14627 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CDX4O14627 RBBP8P1-201ENST00000449447 1844 ntBASIC1.97□□□□□ -2.09
CDX4O14627 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CDX4O14627 RNU6-78P-201ENST00000362897 107 ntBASIC1.97□□□□□ -2.09
CDX4O14627 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.97□□□□□ -2.09
CDX4O14627 DEFA7P-201ENST00000382676 285 ntBASIC1.97□□□□□ -2.09
CDX4O14627 SNORD116-11-201ENST00000383882 92 ntBASIC1.97□□□□□ -2.09
CDX4O14627 SNORD73A-201ENST00000386062 65 ntBASIC1.97□□□□□ -2.09
CDX4O14627 MIR548F5-201ENST00000408421 86 ntBASIC1.97□□□□□ -2.09
CDX4O14627 RNA5SP390-201ENST00000410191 113 ntBASIC1.97□□□□□ -2.09
CDX4O14627 RNU4-14P-201ENST00000410858 122 ntBASIC1.97□□□□□ -2.09
CDX4O14627 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.97□□□□□ -2.09
CDX4O14627 AL590632.1-201ENST00000424289 371 ntBASIC1.97□□□□□ -2.09
CDX4O14627 AL591043.1-201ENST00000432461 424 ntBASIC1.97□□□□□ -2.09
CDX4O14627 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.97□□□□□ -2.09
CDX4O14627 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.97□□□□□ -2.09
CDX4O14627 RNA5SP454-201ENST00000517231 127 ntBASIC1.97□□□□□ -2.09
CDX4O14627 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CDX4O14627 AC109329.1-201ENST00000518744 317 ntBASIC1.97□□□□□ -2.09
CDX4O14627 AP005639.2-201ENST00000527592 928 ntBASIC1.97□□□□□ -2.09
CDX4O14627 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.97□□□□□ -2.09
CDX4O14627 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.97□□□□□ -2.09
CDX4O14627 MIR4790-201ENST00000577799 79 ntBASIC1.97□□□□□ -2.09
CDX4O14627 AC105245.1-201ENST00000581934 244 ntBASIC1.97□□□□□ -2.09
CDX4O14627 AC123912.5-201ENST00000605470 343 ntBASIC1.97□□□□□ -2.09
CDX4O14627 AL022345.1-201ENST00000607292 135 ntBASIC1.97□□□□□ -2.09
CDX4O14627 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.97□□□□□ -2.09
CDX4O14627 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CDX4O14627 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CDX4O14627 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CDX4O14627 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CDX4O14627 MIR337-201ENST00000362281 93 ntBASIC1.96□□□□□ -2.1
CDX4O14627 RNU6-1010P-201ENST00000362757 107 ntBASIC1.96□□□□□ -2.1
CDX4O14627 RNU4-79P-201ENST00000362764 141 ntBASIC1.96□□□□□ -2.1
CDX4O14627 Y_RNA.813-201ENST00000364639 102 ntBASIC1.96□□□□□ -2.1
CDX4O14627 Y_RNA.339-201ENST00000365325 102 ntBASIC1.96□□□□□ -2.1
CDX4O14627 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CDX4O14627 RNU1-52P-201ENST00000384190 164 ntBASIC1.96□□□□□ -2.1
CDX4O14627 Y_RNA.535-201ENST00000384612 99 ntBASIC1.96□□□□□ -2.1
CDX4O14627 MIR548K-201ENST00000408406 116 ntBASIC1.96□□□□□ -2.1
CDX4O14627 RNU6-1304P-201ENST00000411374 106 ntBASIC1.96□□□□□ -2.1
CDX4O14627 RPL30P4-201ENST00000429309 333 ntBASIC1.96□□□□□ -2.1
CDX4O14627 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.96□□□□□ -2.1
CDX4O14627 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.96□□□□□ -2.1
CDX4O14627 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.96□□□□□ -2.1
CDX4O14627 AC112771.1-201ENST00000463581 102 ntBASIC1.96□□□□□ -2.1
CDX4O14627 AC008526.1-201ENST00000509149 338 ntBASIC1.96□□□□□ -2.1
CDX4O14627 AC092436.3-201ENST00000511788 257 ntBASIC1.96□□□□□ -2.1
CDX4O14627 RNA5SP445-201ENST00000515889 115 ntBASIC1.96□□□□□ -2.1
CDX4O14627 AC087854.1-201ENST00000519706 414 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms