Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AP001486.3-201ENST00000615334 372 ntBASIC2□□□□□ -2.09
CUX2O14529 AC091925.1-201ENST00000623204 462 ntBASIC2□□□□□ -2.09
CUX2O14529 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.99□□□□□ -2.09
CUX2O14529 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.99□□□□□ -2.09
CUX2O14529 RNU6-715P-201ENST00000365204 103 ntBASIC1.99□□□□□ -2.09
CUX2O14529 RNU6-546P-201ENST00000383991 107 ntBASIC1.99□□□□□ -2.09
CUX2O14529 RNU6-434P-201ENST00000384376 107 ntBASIC1.99□□□□□ -2.09
CUX2O14529 MIR758-201ENST00000390227 88 ntBASIC1.99□□□□□ -2.09
CUX2O14529 SNORD70.1-201ENST00000391007 85 ntBASIC1.99□□□□□ -2.09
CUX2O14529 RNA5SP465-201ENST00000391195 109 ntBASIC1.99□□□□□ -2.09
CUX2O14529 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.99□□□□□ -2.09
CUX2O14529 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.99□□□□□ -2.09
CUX2O14529 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.99□□□□□ -2.09
CUX2O14529 RPS29P15-201ENST00000458329 171 ntBASIC1.99□□□□□ -2.09
CUX2O14529 AC093249.1-201ENST00000567049 203 ntBASIC1.99□□□□□ -2.09
CUX2O14529 MIR4528-201ENST00000577763 90 ntBASIC1.99□□□□□ -2.09
CUX2O14529 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.99□□□□□ -2.09
CUX2O14529 AC005034.5-201ENST00000604219 466 ntBASIC1.99□□□□□ -2.09
CUX2O14529 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
CUX2O14529 RMST_4.1-201ENST00000616886 107 ntBASIC1.99□□□□□ -2.09
CUX2O14529 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.98□□□□□ -2.09
CUX2O14529 RNU6-1120P-201ENST00000362988 108 ntBASIC1.98□□□□□ -2.09
CUX2O14529 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.98□□□□□ -2.09
CUX2O14529 CYCSP33-201ENST00000414485 327 ntBASIC1.98□□□□□ -2.09
CUX2O14529 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CUX2O14529 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.98□□□□□ -2.09
CUX2O14529 AC098826.2-201ENST00000452011 651 ntBASIC1.98□□□□□ -2.09
CUX2O14529 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.98□□□□□ -2.09
CUX2O14529 MTND2P33-201ENST00000506452 1031 ntBASIC1.98□□□□□ -2.09
CUX2O14529 MTCO3P28-201ENST00000513351 515 ntBASIC1.98□□□□□ -2.09
CUX2O14529 SNRPGP17-201ENST00000603780 214 ntBASIC1.98□□□□□ -2.09
CUX2O14529 AC008147.4-201ENST00000617570 1204 ntBASIC1.98□□□□□ -2.09
CUX2O14529 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.98□□□□□ -2.09
CUX2O14529 U4.7-201ENST00000638126 106 ntBASIC1.98□□□□□ -2.09
CUX2O14529 snoU2_19.1-201ENST00000362361 80 ntBASIC1.97□□□□□ -2.09
CUX2O14529 RNU6-78P-201ENST00000362897 107 ntBASIC1.97□□□□□ -2.09
CUX2O14529 RNU1-23P-201ENST00000363361 144 ntBASIC1.97□□□□□ -2.09
CUX2O14529 U3.13-201ENST00000364804 214 ntBASIC1.97□□□□□ -2.09
CUX2O14529 Y_RNA.480-201ENST00000384364 102 ntBASIC1.97□□□□□ -2.09
CUX2O14529 RNY3P9-201ENST00000384727 106 ntBASIC1.97□□□□□ -2.09
CUX2O14529 RNU2-9P-201ENST00000410194 145 ntBASIC1.97□□□□□ -2.09
CUX2O14529 RNU4-46P-201ENST00000410818 138 ntBASIC1.97□□□□□ -2.09
CUX2O14529 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.97□□□□□ -2.09
CUX2O14529 USP9YP29-201ENST00000445112 563 ntBASIC1.97□□□□□ -2.09
CUX2O14529 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.97□□□□□ -2.09
CUX2O14529 AL122001.1-201ENST00000457027 370 ntBASIC1.97□□□□□ -2.09
CUX2O14529 SCARNA18-201ENST00000459004 134 ntBASIC1.97□□□□□ -2.09
CUX2O14529 AC093852.1-201ENST00000503587 266 ntBASIC1.97□□□□□ -2.09
CUX2O14529 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.97□□□□□ -2.09
CUX2O14529 SNORD27.1-201ENST00000516319 72 ntBASIC1.97□□□□□ -2.09
CUX2O14529 Y_RNA.695-201ENST00000516715 107 ntBASIC1.97□□□□□ -2.09
CUX2O14529 RNA5SP137-201ENST00000516833 135 ntBASIC1.97□□□□□ -2.09
CUX2O14529 AP002963.1-201ENST00000530590 184 ntBASIC1.97□□□□□ -2.09
CUX2O14529 AC068790.2-201ENST00000602601 557 ntBASIC1.97□□□□□ -2.09
CUX2O14529 AL158063.1-201ENST00000615349 536 ntBASIC1.97□□□□□ -2.09
CUX2O14529 AC063943.3-201ENST00000615562 356 ntBASIC1.97□□□□□ -2.09
CUX2O14529 MIR7974-201ENST00000615835 79 ntBASIC1.97□□□□□ -2.09
CUX2O14529 AC099842.1-201ENST00000619919 596 ntBASIC1.97□□□□□ -2.09
CUX2O14529 MIR6513-201ENST00000621188 64 ntBASIC1.97□□□□□ -2.09
CUX2O14529 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CUX2O14529 RNU2-29P-201ENST00000410423 189 ntBASIC1.96□□□□□ -2.1
CUX2O14529 RNU6-293P-201ENST00000411259 106 ntBASIC1.96□□□□□ -2.1
CUX2O14529 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.96□□□□□ -2.1
CUX2O14529 C1DP4-201ENST00000455429 424 ntBASIC1.96□□□□□ -2.1
CUX2O14529 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.96□□□□□ -2.1
CUX2O14529 GMFBP1-201ENST00000467831 427 ntBASIC1.96□□□□□ -2.1
CUX2O14529 AC055731.1-201ENST00000474387 401 ntBASIC1.96□□□□□ -2.1
CUX2O14529 AC079382.1-201ENST00000493346 557 ntBASIC1.96□□□□□ -2.1
CUX2O14529 RNU2-19P-201ENST00000517288 84 ntBASIC1.96□□□□□ -2.1
CUX2O14529 AC026407.1-201ENST00000518369 204 ntBASIC1.96□□□□□ -2.1
CUX2O14529 AC034114.1-201ENST00000520293 285 ntBASIC1.96□□□□□ -2.1
CUX2O14529 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.96□□□□□ -2.1
CUX2O14529 AC078795.2-201ENST00000602835 1252 ntBASIC1.96□□□□□ -2.1
CUX2O14529 AC091805.2-201ENST00000603848 235 ntBASIC1.96□□□□□ -2.1
CUX2O14529 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
CUX2O14529 Z69720.2-201ENST00000624755 279 ntBASIC1.96□□□□□ -2.1
CUX2O14529 ELL2P3-201ENST00000457883 1602 ntBASIC1.96□□□□□ -2.1
CUX2O14529 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CUX2O14529 RNU6-1222P-201ENST00000384615 107 ntBASIC1.95□□□□□ -2.1
CUX2O14529 RNU6-606P-201ENST00000384721 111 ntBASIC1.95□□□□□ -2.1
CUX2O14529 AL590556.1-201ENST00000423231 483 ntBASIC1.95□□□□□ -2.1
CUX2O14529 USP9YP18-201ENST00000425912 695 ntBASIC1.95□□□□□ -2.1
CUX2O14529 AL358934.1-201ENST00000432346 324 ntBASIC1.95□□□□□ -2.1
CUX2O14529 CETN4P-201ENST00000432407 469 ntBASIC1.95□□□□□ -2.1
CUX2O14529 AC007969.2-201ENST00000441891 191 ntBASIC1.95□□□□□ -2.1
CUX2O14529 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.95□□□□□ -2.1
CUX2O14529 PRPS1P1-201ENST00000445305 876 ntBASIC1.95□□□□□ -2.1
CUX2O14529 RNU6-956P-201ENST00000458868 103 ntBASIC1.95□□□□□ -2.1
CUX2O14529 snoU13.14-201ENST00000459372 104 ntBASIC1.95□□□□□ -2.1
CUX2O14529 AC018868.1-201ENST00000491307 315 ntBASIC1.95□□□□□ -2.1
CUX2O14529 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.95□□□□□ -2.1
CUX2O14529 HMGB3P17-201ENST00000504195 649 ntBASIC1.95□□□□□ -2.1
CUX2O14529 MTCO2P4-201ENST00000517968 247 ntBASIC1.95□□□□□ -2.1
CUX2O14529 SUB1P2-201ENST00000556401 297 ntBASIC1.95□□□□□ -2.1
CUX2O14529 AC233702.2-202ENST00000562547 291 ntBASIC1.95□□□□□ -2.1
CUX2O14529 MIR4703-201ENST00000577728 79 ntBASIC1.95□□□□□ -2.1
CUX2O14529 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.95□□□□□ -2.1
CUX2O14529 AC025449.1-201ENST00000603896 529 ntBASIC1.95□□□□□ -2.1
CUX2O14529 Z82243.1-201ENST00000609432 473 ntBASIC1.95□□□□□ -2.1
CUX2O14529 AC009090.3-201ENST00000616553 565 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms