Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 RNU6-700P-201ENST00000391043 107 ntBASIC-0.2□□□□□ -2.44
HMGN4O00479 RNA5SP504-201ENST00000410676 117 ntBASIC-0.2□□□□□ -2.44
HMGN4O00479 AC007395.1-201ENST00000451333 677 ntBASIC-0.2□□□□□ -2.44
HMGN4O00479 AC016925.1-201ENST00000458303 298 ntBASIC-0.2□□□□□ -2.44
HMGN4O00479 AC093534.1-201ENST00000504977 132 ntBASIC-0.2□□□□□ -2.44
HMGN4O00479 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-0.2□□□□□ -2.44
HMGN4O00479 MTND1P36-201ENST00000522384 936 ntBASIC-0.2□□□□□ -2.44
HMGN4O00479 SUB1P2-201ENST00000556401 297 ntBASIC-0.2□□□□□ -2.44
HMGN4O00479 AC106754.2-201ENST00000623006 233 ntBASIC-0.2□□□□□ -2.44
HMGN4O00479 AP000676.3-201ENST00000623299 569 ntBASIC-0.2□□□□□ -2.44
HMGN4O00479 FCF1P10-201ENST00000407590 479 ntBASIC-0.21□□□□□ -2.44
HMGN4O00479 AC027644.1-201ENST00000419595 298 ntBASIC-0.21□□□□□ -2.44
HMGN4O00479 MTND1P31-201ENST00000449206 961 ntBASIC-0.21□□□□□ -2.44
HMGN4O00479 MRPL42P4-201ENST00000453267 443 ntBASIC-0.21□□□□□ -2.44
HMGN4O00479 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.21□□□□□ -2.44
HMGN4O00479 RNU7-59P-201ENST00000459101 61 ntBASIC-0.21□□□□□ -2.44
HMGN4O00479 RNU6-953P-201ENST00000459154 107 ntBASIC-0.21□□□□□ -2.44
HMGN4O00479 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.21□□□□□ -2.44
HMGN4O00479 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.21□□□□□ -2.44
HMGN4O00479 RNU6-856P-201ENST00000516959 98 ntBASIC-0.21□□□□□ -2.44
HMGN4O00479 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.21□□□□□ -2.44
HMGN4O00479 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.21□□□□□ -2.44
HMGN4O00479 MIR4293-201ENST00000584305 78 ntBASIC-0.21□□□□□ -2.44
HMGN4O00479 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
HMGN4O00479 RNA5SP214-201ENST00000363378 118 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 RNU4-76P-201ENST00000364509 141 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 RNU6-395P-201ENST00000365662 106 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 SNORA75B-201ENST00000384053 137 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 RNU6-701P-201ENST00000384059 107 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 MIR193B-201ENST00000384907 83 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 RNA5SP63-201ENST00000391225 112 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.22□□□□□ -2.44
HMGN4O00479 AL358176.2-201ENST00000425769 204 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.22□□□□□ -2.44
HMGN4O00479 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-0.22□□□□□ -2.44
HMGN4O00479 AC245047.8-201ENST00000456455 284 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 AC006026.2-201ENST00000457376 180 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 RNU6-583P-201ENST00000516012 92 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 RNU1-86P-201ENST00000516108 154 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 RNU1-107P-201ENST00000516617 154 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 RNU6-64P-201ENST00000517119 105 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 AC069113.3-201ENST00000521019 150 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 AC027419.1-201ENST00000522976 328 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 AC022523.2-201ENST00000561045 150 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 AL136317.1-201ENST00000612653 226 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 AC090517.2-201ENST00000614966 680 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.22□□□□□ -2.44
HMGN4O00479 AC136475.10-201ENST00000620253 385 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 SCARNA4-202ENST00000625402 129 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 MIR338-201ENST00000636369 67 ntBASIC-0.22□□□□□ -2.44
HMGN4O00479 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.23□□□□□ -2.45
HMGN4O00479 SNORD56.1-201ENST00000362913 68 ntBASIC-0.23□□□□□ -2.45
HMGN4O00479 SNORA32.1-201ENST00000364514 115 ntBASIC-0.23□□□□□ -2.45
HMGN4O00479 RNU4-48P-201ENST00000365559 182 ntBASIC-0.23□□□□□ -2.45
HMGN4O00479 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.23□□□□□ -2.45
HMGN4O00479 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.23□□□□□ -2.45
HMGN4O00479 MRPS36P1-201ENST00000421291 307 ntBASIC-0.23□□□□□ -2.45
HMGN4O00479 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.23□□□□□ -2.45
HMGN4O00479 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.23□□□□□ -2.45
HMGN4O00479 SEPT7P5-201ENST00000434048 306 ntBASIC-0.23□□□□□ -2.45
HMGN4O00479 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.23□□□□□ -2.45
HMGN4O00479 AC104332.1-201ENST00000440471 797 ntBASIC-0.23□□□□□ -2.45
HMGN4O00479 AC067940.1-201ENST00000458411 300 ntBASIC-0.23□□□□□ -2.45
HMGN4O00479 SNORA43.2-201ENST00000516652 128 ntBASIC-0.23□□□□□ -2.45
HMGN4O00479 MTND4LP26-201ENST00000518144 282 ntBASIC-0.23□□□□□ -2.45
HMGN4O00479 MTND2P7-201ENST00000521337 640 ntBASIC-0.23□□□□□ -2.45
HMGN4O00479 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.23□□□□□ -2.45
HMGN4O00479 AC090049.2-201ENST00000550377 109 ntBASIC-0.23□□□□□ -2.45
HMGN4O00479 AC131055.1-201ENST00000584626 316 ntBASIC-0.23□□□□□ -2.45
HMGN4O00479 AL157770.1-201ENST00000623049 439 ntBASIC-0.23□□□□□ -2.45
HMGN4O00479 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.23□□□□□ -2.45
HMGN4O00479 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.23□□□□□ -2.45
HMGN4O00479 MIR19A-201ENST00000384878 82 ntBASIC-0.24□□□□□ -2.45
HMGN4O00479 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.24□□□□□ -2.45
HMGN4O00479 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.24□□□□□ -2.45
HMGN4O00479 AL627311.1-201ENST00000431514 115 ntBASIC-0.24□□□□□ -2.45
HMGN4O00479 AL162725.1-201ENST00000435405 301 ntBASIC-0.24□□□□□ -2.45
HMGN4O00479 HMGB1P28-201ENST00000507778 552 ntBASIC-0.24□□□□□ -2.45
HMGN4O00479 RNU6-914P-201ENST00000516749 109 ntBASIC-0.24□□□□□ -2.45
HMGN4O00479 AC115990.1-201ENST00000526957 301 ntBASIC-0.24□□□□□ -2.45
HMGN4O00479 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.24□□□□□ -2.45
HMGN4O00479 MIR3678-201ENST00000578455 94 ntBASIC-0.24□□□□□ -2.45
HMGN4O00479 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.24□□□□□ -2.45
HMGN4O00479 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.24□□□□□ -2.45
HMGN4O00479 AC011712.1-201ENST00000588959 234 ntBASIC-0.24□□□□□ -2.45
HMGN4O00479 AL353778.1-201ENST00000603149 408 ntBASIC-0.24□□□□□ -2.45
HMGN4O00479 AL034555.1-201ENST00000604816 211 ntBASIC-0.24□□□□□ -2.45
HMGN4O00479 AL513423.1-201ENST00000621695 132 ntBASIC-0.24□□□□□ -2.45
HMGN4O00479 AL603839.4-201ENST00000624658 1005 ntBASIC-0.24□□□□□ -2.45
HMGN4O00479 MTND5P42-201ENST00000637720 498 ntBASIC-0.24□□□□□ -2.45
HMGN4O00479 CDR1-202ENST00000625883 1485 ntBASIC-0.24□□□□□ -2.45
HMGN4O00479 RNU6-744P-201ENST00000365557 107 ntBASIC-0.25□□□□□ -2.45
HMGN4O00479 RNU6-1316P-201ENST00000384242 108 ntBASIC-0.25□□□□□ -2.45
HMGN4O00479 RNA5SP109-201ENST00000391010 116 ntBASIC-0.25□□□□□ -2.45
HMGN4O00479 RNA5SP496-201ENST00000391240 109 ntBASIC-0.25□□□□□ -2.45
HMGN4O00479 RPS3AP36-201ENST00000398190 775 ntBASIC-0.25□□□□□ -2.45
HMGN4O00479 AL451046.2-201ENST00000403074 277 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms