Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-302P-201ENST00000365249 107 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 MIR518A1-201ENST00000385068 85 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 MIR660-201ENST00000385235 97 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 MTCYBP2-201ENST00000407745 171 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 Y_RNA.595-201ENST00000410403 105 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 MTCO2P34-201ENST00000421994 607 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 SEPT7P5-201ENST00000434048 306 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 MTCYBP39-201ENST00000437562 491 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 HMGN2P34-201ENST00000437647 269 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 RPL7P55-201ENST00000450522 746 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 MTCO3P10-201ENST00000455912 772 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 snoU13.25-201ENST00000458945 104 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 RN7SL429P-201ENST00000479090 223 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 RN7SL489P-201ENST00000486185 223 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 RN7SL327P-201ENST00000488659 223 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 AC022447.4-201ENST00000504053 364 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 HMGB1P28-201ENST00000507778 552 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 AC023827.1-201ENST00000569247 97 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 RPL21P136-201ENST00000605378 396 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 AL354696.1-201ENST00000614652 497 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 MIR6718-201ENST00000616153 80 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 RN7SL853P-201ENST00000617250 223 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 AC092634.7-201ENST00000621022 103 ntBASIC-0.31□□□□□ -2.46
CHKB-CPT1BH3BT56 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 MIR412-201ENST00000362142 91 ntBASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 SNORD114-22-201ENST00000365423 72 ntBASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 SNORA12.1-201ENST00000390873 148 ntBASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 SNORD65.1-201ENST00000390889 71 ntBASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU7-14P-201ENST00000459331 62 ntBASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 OR9P1P-201ENST00000496431 281 ntBASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 LRRC34P2-201ENST00000514850 553 ntBASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-917P-201ENST00000516294 104 ntBASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-405P-201ENST00000516637 110 ntBASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-467P-201ENST00000517027 110 ntBASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 MIR3945-201ENST00000581853 98 ntBASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 AL138889.2-201ENST00000603883 242 ntBASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 AC104408.1-201ENST00000605241 170 ntBASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 AC004832.4-201ENST00000608952 331 ntBASIC-0.32□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-199P-201ENST00000362954 107 ntBASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-142P-201ENST00000384019 107 ntBASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 AL606517.2-201ENST00000442855 241 ntBASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-1132P-201ENST00000459214 107 ntBASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 MTND3P5-201ENST00000512798 333 ntBASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 AC022868.1-201ENST00000517767 391 ntBASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 AC024995.1-201ENST00000523014 93 ntBASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 AP000889.1-201ENST00000530968 660 ntBASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 AC141557.1-201ENST00000540982 400 ntBASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 AC012507.3-201ENST00000603556 477 ntBASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 AC064872.1-201ENST00000604823 1072 ntBASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 AC022893.3-201ENST00000607665 437 ntBASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 AC004808.1-201ENST00000627671 721 ntBASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 BX322639.1-202ENST00000423987 2213 ntBASIC-0.33□□□□□ -2.46
CHKB-CPT1BH3BT56 MIR103A2-201ENST00000362154 78 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 SNORD114-5-201ENST00000362928 70 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 SNORD114-23-201ENST00000363536 72 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 Y_RNA.191-201ENST00000363972 113 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6V-201ENST00000384105 107 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-514P-201ENST00000384208 107 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 RNU6-1122P-201ENST00000384449 107 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 MIR10A-201ENST00000385043 110 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 RN7SKP200-201ENST00000410564 320 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 VPS26BP1-201ENST00000417155 755 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 AL590623.1-201ENST00000427864 105 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 AC079776.3-201ENST00000450665 370 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 AC067940.1-201ENST00000458411 300 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 AC113347.3-201ENST00000509113 148 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 AC116347.2-201ENST00000514912 523 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 AC109446.1-201ENST00000566172 220 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 AC110760.3-201ENST00000598794 467 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 AL022154.1-201ENST00000604698 785 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 AC100814.1-201ENST00000606963 623 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 AL096861.1-201ENST00000610899 123 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 AC104073.3-201ENST00000610942 955 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 AC112204.3-201ENST00000623822 332 ntBASIC-0.34□□□□□ -2.46
CHKB-CPT1BH3BT56 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.35□□□□□ -2.47
CHKB-CPT1BH3BT56 SNORD114-26-201ENST00000363543 72 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms