Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC107393.1-201ENST00000512403 346 ntBASIC1.2□□□□□ -2.22
SMKR1H3BMG3 RNA5SP445-201ENST00000515889 115 ntBASIC1.2□□□□□ -2.22
SMKR1H3BMG3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.2□□□□□ -2.22
SMKR1H3BMG3 AC016256.1-201ENST00000547971 354 ntBASIC1.2□□□□□ -2.22
SMKR1H3BMG3 AC004223.2-201ENST00000590309 544 ntBASIC1.2□□□□□ -2.22
SMKR1H3BMG3 NIFKP6-201ENST00000598115 845 ntBASIC1.2□□□□□ -2.22
SMKR1H3BMG3 AP001485.1-201ENST00000604799 199 ntBASIC1.2□□□□□ -2.22
SMKR1H3BMG3 HULC.1-201ENST00000612720 240 ntBASIC1.2□□□□□ -2.22
SMKR1H3BMG3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
SMKR1H3BMG3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.2□□□□□ -2.22
SMKR1H3BMG3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.2□□□□□ -2.22
SMKR1H3BMG3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SMKR1H3BMG3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.19□□□□□ -2.22
SMKR1H3BMG3 RNU6-562P-201ENST00000362731 107 ntBASIC1.19□□□□□ -2.22
SMKR1H3BMG3 Y_RNA.255-201ENST00000364581 97 ntBASIC1.19□□□□□ -2.22
SMKR1H3BMG3 RNU6-1103P-201ENST00000384150 107 ntBASIC1.19□□□□□ -2.22
SMKR1H3BMG3 SNORD73A-201ENST00000386062 65 ntBASIC1.19□□□□□ -2.22
SMKR1H3BMG3 RNA5SP219-201ENST00000390940 113 ntBASIC1.19□□□□□ -2.22
SMKR1H3BMG3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.19□□□□□ -2.22
SMKR1H3BMG3 AC092447.3-201ENST00000426027 686 ntBASIC1.19□□□□□ -2.22
SMKR1H3BMG3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.19□□□□□ -2.22
SMKR1H3BMG3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.19□□□□□ -2.22
SMKR1H3BMG3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SMKR1H3BMG3 AL121601.2-201ENST00000438019 707 ntBASIC1.19□□□□□ -2.22
SMKR1H3BMG3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.19□□□□□ -2.22
SMKR1H3BMG3 USP9YP29-201ENST00000445112 563 ntBASIC1.19□□□□□ -2.22
SMKR1H3BMG3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
SMKR1H3BMG3 RPS26P55-201ENST00000471178 356 ntBASIC1.19□□□□□ -2.22
SMKR1H3BMG3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.19□□□□□ -2.22
SMKR1H3BMG3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.19□□□□□ -2.22
SMKR1H3BMG3 RNA5SP481-201ENST00000516814 122 ntBASIC1.19□□□□□ -2.22
SMKR1H3BMG3 RNU6-612P-201ENST00000516909 102 ntBASIC1.19□□□□□ -2.22
SMKR1H3BMG3 RNU6-902P-201ENST00000517212 91 ntBASIC1.19□□□□□ -2.22
SMKR1H3BMG3 RNA5SP437-201ENST00000517249 129 ntBASIC1.19□□□□□ -2.22
SMKR1H3BMG3 AC084364.2-201ENST00000546924 395 ntBASIC1.19□□□□□ -2.22
SMKR1H3BMG3 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.19□□□□□ -2.22
SMKR1H3BMG3 AP005136.1-201ENST00000579765 429 ntBASIC1.19□□□□□ -2.22
SMKR1H3BMG3 AC073114.1-201ENST00000612027 490 ntBASIC1.19□□□□□ -2.22
SMKR1H3BMG3 AL354950.2-201ENST00000617939 290 ntBASIC1.19□□□□□ -2.22
SMKR1H3BMG3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SMKR1H3BMG3 ICE2P2-201ENST00000483823 2787 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 MIR302D-201ENST00000362275 68 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 RNU6-545P-201ENST00000362681 104 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 RNU6-227P-201ENST00000362865 103 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 RNU1-96P-201ENST00000364163 162 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 SNORD1A-201ENST00000364968 72 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 SNORA18.2-201ENST00000383865 132 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 RNU6-877P-201ENST00000383868 107 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 AC068050.1-201ENST00000394891 380 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 MIR300-201ENST00000401138 83 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 AL606923.1-201ENST00000406616 190 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 RNU6-955P-201ENST00000410497 104 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 RN7SKP101-201ENST00000411376 320 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 AC090960.1-201ENST00000421072 306 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.18□□□□□ -2.22
SMKR1H3BMG3 AC073464.1-201ENST00000429823 534 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 AL353705.4-201ENST00000449661 238 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.18□□□□□ -2.22
SMKR1H3BMG3 MTCO2P18-201ENST00000457151 658 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 snoU13.30-201ENST00000458951 104 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 CCDC34P1-201ENST00000507441 517 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 AC067942.3-201ENST00000512025 362 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 SNORA14.1-201ENST00000516113 141 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 RNU6-856P-201ENST00000516959 98 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 RNU6-323P-201ENST00000521915 107 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.18□□□□□ -2.22
SMKR1H3BMG3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.18□□□□□ -2.22
SMKR1H3BMG3 AC110588.1-201ENST00000559699 137 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.18□□□□□ -2.22
SMKR1H3BMG3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.18□□□□□ -2.22
SMKR1H3BMG3 MIR3162-201ENST00000581818 82 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 AC087683.1-201ENST00000591187 441 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 CTHRC1P1-201ENST00000605383 469 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.18□□□□□ -2.22
SMKR1H3BMG3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SMKR1H3BMG3 AL161722.3-201ENST00000605789 2983 ntBASIC1.18□□□□□ -2.22
SMKR1H3BMG3 AC100821.1-201ENST00000523153 2479 ntBASIC1.17□□□□□ -2.22
SMKR1H3BMG3 SNORA63D-201ENST00000364359 132 ntBASIC1.17□□□□□ -2.22
SMKR1H3BMG3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
SMKR1H3BMG3 RNU6-1158P-201ENST00000391167 107 ntBASIC1.17□□□□□ -2.22
SMKR1H3BMG3 AL117342.1-201ENST00000404861 406 ntBASIC1.17□□□□□ -2.22
SMKR1H3BMG3 Z98742.3-201ENST00000418637 326 ntBASIC1.17□□□□□ -2.22
SMKR1H3BMG3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.17□□□□□ -2.22
SMKR1H3BMG3 HMGN2P9-201ENST00000476875 229 ntBASIC1.17□□□□□ -2.22
SMKR1H3BMG3 AC023790.1-201ENST00000482174 347 ntBASIC1.17□□□□□ -2.22
SMKR1H3BMG3 AC099513.1-201ENST00000490423 301 ntBASIC1.17□□□□□ -2.22
SMKR1H3BMG3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
SMKR1H3BMG3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.17□□□□□ -2.22
SMKR1H3BMG3 RPL39P5-202ENST00000512505 151 ntBASIC1.17□□□□□ -2.22
SMKR1H3BMG3 RNU6-1041P-201ENST00000516254 102 ntBASIC1.17□□□□□ -2.22
SMKR1H3BMG3 Y_RNA.695-201ENST00000516715 107 ntBASIC1.17□□□□□ -2.22
SMKR1H3BMG3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.17□□□□□ -2.22
SMKR1H3BMG3 SNORA59B-202ENST00000578183 701 ntBASIC1.17□□□□□ -2.22
SMKR1H3BMG3 MIR4424-201ENST00000585257 86 ntBASIC1.17□□□□□ -2.22
SMKR1H3BMG3 AL391646.1-201ENST00000603860 190 ntBASIC1.17□□□□□ -2.22
SMKR1H3BMG3 PRR13P7-201ENST00000605538 430 ntBASIC1.17□□□□□ -2.22
SMKR1H3BMG3 MIR3976-201ENST00000606807 139 ntBASIC1.17□□□□□ -2.22
SMKR1H3BMG3 MIR8063-201ENST00000621930 81 ntBASIC1.17□□□□□ -2.22
SMKR1H3BMG3 MTND5P10-201ENST00000603719 1809 ntBASIC1.17□□□□□ -2.22
SMKR1H3BMG3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms