Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
H3BM21 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
H3BM21 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
H3BM21 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
H3BM21 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
H3BM21 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
H3BM21 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
H3BM21 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
H3BM21 RNU1-132P-201ENST00000364300 164 ntBASIC4.3□□□□□ -1.72
H3BM21 SNORA48.7-201ENST00000391302 135 ntBASIC4.3□□□□□ -1.72
H3BM21 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.3□□□□□ -1.72
H3BM21 AF228730.3-201ENST00000436691 102 ntBASIC4.3□□□□□ -1.72
H3BM21 RPL26P9-201ENST00000457466 433 ntBASIC4.3□□□□□ -1.72
H3BM21 RPL30P5-201ENST00000494923 336 ntBASIC4.3□□□□□ -1.72
H3BM21 RNU2-13P-201ENST00000515909 113 ntBASIC4.3□□□□□ -1.72
H3BM21 RNU6-504P-201ENST00000516568 104 ntBASIC4.3□□□□□ -1.72
H3BM21 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.3□□□□□ -1.72
H3BM21 MIR492-201ENST00000638676 116 ntBASIC4.3□□□□□ -1.72
H3BM21 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.3□□□□□ -1.72
H3BM21 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
H3BM21 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
H3BM21 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
H3BM21 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
H3BM21 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.3□□□□□ -1.72
H3BM21 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.3□□□□□ -1.72
H3BM21 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.3□□□□□ -1.72
H3BM21 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
H3BM21 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
H3BM21 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.29□□□□□ -1.72
H3BM21 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
H3BM21 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.29□□□□□ -1.72
H3BM21 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
H3BM21 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.29□□□□□ -1.72
H3BM21 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
H3BM21 RNA5SP175-201ENST00000364275 119 ntBASIC4.29□□□□□ -1.72
H3BM21 RNA5SP22-201ENST00000365393 109 ntBASIC4.29□□□□□ -1.72
H3BM21 Y_RNA.362-201ENST00000365518 110 ntBASIC4.29□□□□□ -1.72
H3BM21 RNU6-628P-201ENST00000410675 107 ntBASIC4.29□□□□□ -1.72
H3BM21 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.29□□□□□ -1.72
H3BM21 TOMM22P2-201ENST00000430735 237 ntBASIC4.29□□□□□ -1.72
H3BM21 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.29□□□□□ -1.72
H3BM21 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.29□□□□□ -1.72
H3BM21 RPL23AP52-201ENST00000439311 478 ntBASIC4.29□□□□□ -1.72
H3BM21 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.29□□□□□ -1.72
H3BM21 AC103975.1-201ENST00000482506 483 ntBASIC4.29□□□□□ -1.72
H3BM21 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.29□□□□□ -1.72
H3BM21 SNORA31.16-201ENST00000516773 139 ntBASIC4.29□□□□□ -1.72
H3BM21 RNU4-60P-201ENST00000517239 135 ntBASIC4.29□□□□□ -1.72
H3BM21 AC068339.1-201ENST00000526965 141 ntBASIC4.29□□□□□ -1.72
H3BM21 RPL23AP97-201ENST00000568955 471 ntBASIC4.29□□□□□ -1.72
H3BM21 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
H3BM21 SNX18P1Y-201ENST00000616231 511 ntBASIC4.29□□□□□ -1.72
H3BM21 MIR8059-201ENST00000620427 81 ntBASIC4.29□□□□□ -1.72
H3BM21 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.29□□□□□ -1.72
H3BM21 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.29□□□□□ -1.72
H3BM21 MIR4662A-201ENST00000637499 67 ntBASIC4.29□□□□□ -1.72
H3BM21 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.29□□□□□ -1.72
H3BM21 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
H3BM21 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
H3BM21 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.29□□□□□ -1.72
H3BM21 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
H3BM21 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
H3BM21 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.28□□□□□ -1.72
H3BM21 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.28□□□□□ -1.72
H3BM21 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
H3BM21 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
H3BM21 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H3BM21 DEFB108F-201ENST00000344638 222 ntBASIC4.28□□□□□ -1.72
H3BM21 Y_RNA.91-201ENST00000363042 107 ntBASIC4.28□□□□□ -1.72
H3BM21 U3.15-201ENST00000365398 212 ntBASIC4.28□□□□□ -1.72
H3BM21 RNU1-64P-201ENST00000365443 163 ntBASIC4.28□□□□□ -1.72
H3BM21 RNU6-24P-201ENST00000384440 107 ntBASIC4.28□□□□□ -1.72
H3BM21 MIR518C-201ENST00000384822 101 ntBASIC4.28□□□□□ -1.72
H3BM21 MIR124-3-201ENST00000384866 87 ntBASIC4.28□□□□□ -1.72
H3BM21 MIR181B1-201ENST00000385240 110 ntBASIC4.28□□□□□ -1.72
H3BM21 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H3BM21 CBX3P9-201ENST00000402326 552 ntBASIC4.28□□□□□ -1.72
H3BM21 RNU2-70P-201ENST00000410718 179 ntBASIC4.28□□□□□ -1.72
H3BM21 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.28□□□□□ -1.72
H3BM21 AC019205.3-201ENST00000424573 156 ntBASIC4.28□□□□□ -1.72
H3BM21 AC002075.2-201ENST00000425207 252 ntBASIC4.28□□□□□ -1.72
H3BM21 AL592156.1-201ENST00000508758 304 ntBASIC4.28□□□□□ -1.72
H3BM21 RNA5SP153-201ENST00000516498 76 ntBASIC4.28□□□□□ -1.72
H3BM21 RNA5SP291-201ENST00000517222 105 ntBASIC4.28□□□□□ -1.72
H3BM21 IGKV3-31-201ENST00000523109 329 ntBASIC4.28□□□□□ -1.72
H3BM21 AL121603.1-201ENST00000553815 142 ntBASIC4.28□□□□□ -1.72
H3BM21 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4.28□□□□□ -1.72
H3BM21 SNORD84-203ENST00000584275 78 ntBASIC4.28□□□□□ -1.72
H3BM21 AL049861.1-201ENST00000603130 150 ntBASIC4.28□□□□□ -1.72
H3BM21 AL591034.3-201ENST00000605511 685 ntBASIC4.28□□□□□ -1.72
H3BM21 AL021707.8-201ENST00000609428 183 ntBASIC4.28□□□□□ -1.72
H3BM21 AL138721.1-201ENST00000616756 179 ntBASIC4.28□□□□□ -1.72
H3BM21 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.28□□□□□ -1.72
H3BM21 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H3BM21 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
H3BM21 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
H3BM21 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.28□□□□□ -1.72
H3BM21 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
H3BM21 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
H3BM21 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms