Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MIR1294-201ENST00000408503 142 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 CBX3P6-201ENST00000430257 527 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 AC114801.2-201ENST00000503825 781 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 MTND4LP26-201ENST00000518144 282 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 AP000889.2-201ENST00000532684 490 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 AC087241.2-201ENST00000535801 324 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 NDUFA5P6-201ENST00000542110 379 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 AC021231.3-201ENST00000558497 370 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 AC109446.1-201ENST00000566172 220 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 MIR3942-201ENST00000585264 109 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 AL158827.2-201ENST00000602494 330 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 Z98751.3-201ENST00000604447 521 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 MIR3976-201ENST00000606807 139 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 MIR6840-201ENST00000611937 71 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 AC093913.1-201ENST00000614178 329 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 AL132822.1-201ENST00000617063 513 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 MIR6766-201ENST00000622641 72 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 MIR1248-201ENST00000629190 106 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 AL691447.3-201ENST00000635020 330 ntBASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
NPIPA3F8WFD2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 AC007336.1-201ENST00000576365 3828 ntBASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 RNU6-562P-201ENST00000362731 107 ntBASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 SNORD115-3-201ENST00000363100 82 ntBASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 RNU6-790P-201ENST00000384479 105 ntBASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 RNU6-95P-201ENST00000384697 107 ntBASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 SNORA26.3-201ENST00000391119 136 ntBASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 U3.40-201ENST00000408706 208 ntBASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 RNU6-1148P-201ENST00000410992 104 ntBASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 AL645568.3-201ENST00000433683 316 ntBASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 AL137159.1-201ENST00000452808 512 ntBASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 MTND1P11-201ENST00000456661 876 ntBASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 AC069439.1-201ENST00000494739 167 ntBASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 AC021146.2-201ENST00000504736 556 ntBASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 AC018630.3-201ENST00000542637 96 ntBASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 PRELID2P1-201ENST00000552837 301 ntBASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 SNRPGP18-201ENST00000553000 214 ntBASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 AC026271.5-201ENST00000577873 130 ntBASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 CPDP1-201ENST00000579660 283 ntBASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 AC023043.2-201ENST00000589678 1026 ntBASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 MIR6132-201ENST00000622083 109 ntBASIC2.03□□□□□ -2.08
NPIPA3F8WFD2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 Y_RNA.212-201ENST00000364177 102 ntBASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 RNU6-611P-201ENST00000384276 104 ntBASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 RNU6-378P-201ENST00000384324 107 ntBASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 RNU6-831P-201ENST00000384548 107 ntBASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 MTCYBP2-201ENST00000407745 171 ntBASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 SNORD23.1-201ENST00000408212 104 ntBASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 RN7SKP32-201ENST00000410167 303 ntBASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 EIF1AXP1-201ENST00000419267 435 ntBASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 AC012306.1-201ENST00000423267 114 ntBASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 Z82205.1-201ENST00000428456 297 ntBASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 IPO7P1-201ENST00000442031 636 ntBASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 PCMTD1P1-201ENST00000455560 355 ntBASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 RNU6-567P-201ENST00000516746 107 ntBASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 SNRPGP17-201ENST00000603780 214 ntBASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 MIR8076-201ENST00000611401 83 ntBASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 AC084782.3-201ENST00000612282 578 ntBASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 AC092794.1-201ENST00000612734 582 ntBASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 U6atac.1-201ENST00000616025 117 ntBASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 AL136221.1-201ENST00000621449 509 ntBASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
NPIPA3F8WFD2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
NPIPA3F8WFD2 Y_RNA.86-201ENST00000363020 111 ntBASIC2.01□□□□□ -2.09
NPIPA3F8WFD2 U3.9-201ENST00000363823 204 ntBASIC2.01□□□□□ -2.09
NPIPA3F8WFD2 SNORD32B-201ENST00000364460 84 ntBASIC2.01□□□□□ -2.09
NPIPA3F8WFD2 SNORD116-11-201ENST00000383882 92 ntBASIC2.01□□□□□ -2.09
NPIPA3F8WFD2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
NPIPA3F8WFD2 MIR208B-201ENST00000401172 77 ntBASIC2.01□□□□□ -2.09
NPIPA3F8WFD2 AL355497.1-201ENST00000406262 551 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms