Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 MIR549A-201ENST00000385268 96 ntBASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 SNORA12-201ENST00000391162 147 ntBASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 FO393413.1-201ENST00000402892 195 ntBASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 RPL21P2-201ENST00000440049 481 ntBASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 U8.22-201ENST00000459141 133 ntBASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 AC090515.1-201ENST00000465295 476 ntBASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 RNU6-1114P-201ENST00000516022 107 ntBASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 RNU6-475P-201ENST00000516073 104 ntBASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 HSPE1P18-201ENST00000517602 280 ntBASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 AC022868.1-201ENST00000517767 391 ntBASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 AP002404.1-201ENST00000532005 451 ntBASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 CBX3P7-201ENST00000532876 502 ntBASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 UBL5P4-201ENST00000562584 236 ntBASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 MIR5695-201ENST00000579717 85 ntBASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 MIR5188-201ENST00000583467 113 ntBASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 PCGEM1.1-201ENST00000613431 131 ntBASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 AC243829.7-201ENST00000633081 225 ntBASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
MBD3L4A6NDZ8 ZNF204P-201ENST00000416749 2397 ntBASIC2.81□□□□□ -1.96
MBD3L4A6NDZ8 Y_RNA.527-201ENST00000384573 102 ntBASIC2.81□□□□□ -1.96
MBD3L4A6NDZ8 Y_RNA.557-201ENST00000384680 107 ntBASIC2.81□□□□□ -1.96
MBD3L4A6NDZ8 WARS2P1-201ENST00000429678 537 ntBASIC2.81□□□□□ -1.96
MBD3L4A6NDZ8 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.81□□□□□ -1.96
MBD3L4A6NDZ8 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.81□□□□□ -1.96
MBD3L4A6NDZ8 AC112492.4-201ENST00000456549 352 ntBASIC2.81□□□□□ -1.96
MBD3L4A6NDZ8 RNA5SP54-201ENST00000516951 92 ntBASIC2.81□□□□□ -1.96
MBD3L4A6NDZ8 RNU6-586P-201ENST00000517265 104 ntBASIC2.81□□□□□ -1.96
MBD3L4A6NDZ8 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.81□□□□□ -1.96
MBD3L4A6NDZ8 AC022080.3-201ENST00000544433 482 ntBASIC2.81□□□□□ -1.96
MBD3L4A6NDZ8 EIF4A1P12-201ENST00000551910 141 ntBASIC2.81□□□□□ -1.96
MBD3L4A6NDZ8 AC090517.1-201ENST00000569307 266 ntBASIC2.81□□□□□ -1.96
MBD3L4A6NDZ8 MIR4680-201ENST00000580906 66 ntBASIC2.81□□□□□ -1.96
MBD3L4A6NDZ8 MIR3117-201ENST00000584034 78 ntBASIC2.81□□□□□ -1.96
MBD3L4A6NDZ8 AC023043.3-201ENST00000593113 385 ntBASIC2.81□□□□□ -1.96
MBD3L4A6NDZ8 AC016727.2-201ENST00000603988 621 ntBASIC2.81□□□□□ -1.96
MBD3L4A6NDZ8 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
MBD3L4A6NDZ8 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 RNU6-879P-201ENST00000364328 108 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 SET-203ENST00000372688 801 ntTSL 2 BASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 Y_RNA.389-201ENST00000383924 113 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 RNU6-1274P-201ENST00000384557 107 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 RNU6-220P-201ENST00000390919 107 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 RNU1-139P-201ENST00000391307 165 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 RPL21P75-201ENST00000396599 483 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 RPL21P28-201ENST00000401418 483 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 Y_RNA.597-201ENST00000410463 100 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 AC113618.1-201ENST00000416747 285 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 Z96811.1-201ENST00000445880 108 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 AC080013.2-201ENST00000460866 323 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 RPL21P39-201ENST00000463605 483 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 AC103975.1-201ENST00000482506 483 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 AC087190.1-201ENST00000484462 480 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 AC107032.1-201ENST00000485945 480 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 AC132942.1-201ENST00000486753 483 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 AC093591.1-201ENST00000491435 481 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 RPL21P16-201ENST00000495531 483 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 AC008885.1-201ENST00000514930 301 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 RNU6-327P-201ENST00000516270 127 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 RNU6-911P-201ENST00000516523 104 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 SNORA40.14-201ENST00000516543 86 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 AC090616.3-201ENST00000582184 217 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 UBL5P2-201ENST00000583788 219 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 MIR3616-201ENST00000584070 92 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 AL356280.1-201ENST00000603614 379 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 AC093732.2-201ENST00000607950 274 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 PART1_1.1-201ENST00000611761 217 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 MIR5739-201ENST00000619803 80 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 AL162373.1-201ENST00000620433 407 ntBASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.8□□□□□ -1.96
MBD3L4A6NDZ8 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
MBD3L4A6NDZ8 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
MBD3L4A6NDZ8 MIR30E-201ENST00000362104 92 ntBASIC2.79□□□□□ -1.96
MBD3L4A6NDZ8 RNU6-137P-201ENST00000363680 108 ntBASIC2.79□□□□□ -1.96
MBD3L4A6NDZ8 RNU6-873P-201ENST00000363833 107 ntBASIC2.79□□□□□ -1.96
MBD3L4A6NDZ8 RNU6-280P-201ENST00000364145 104 ntBASIC2.79□□□□□ -1.96
MBD3L4A6NDZ8 RNU6-450P-201ENST00000364654 107 ntBASIC2.79□□□□□ -1.96
MBD3L4A6NDZ8 SNORA44-201ENST00000384584 132 ntBASIC2.79□□□□□ -1.96
MBD3L4A6NDZ8 SNORD15B-201ENST00000384714 146 ntBASIC2.79□□□□□ -1.96
MBD3L4A6NDZ8 MIR627-201ENST00000384979 97 ntBASIC2.79□□□□□ -1.96
MBD3L4A6NDZ8 RNU6-159P-201ENST00000391080 106 ntBASIC2.79□□□□□ -1.96
MBD3L4A6NDZ8 MIR320B2-201ENST00000408479 138 ntBASIC2.79□□□□□ -1.96
MBD3L4A6NDZ8 RNU6-101P-201ENST00000410323 104 ntBASIC2.79□□□□□ -1.96
MBD3L4A6NDZ8 MTCO3P19-201ENST00000415864 321 ntBASIC2.79□□□□□ -1.96
MBD3L4A6NDZ8 MTND2P23-201ENST00000422990 651 ntBASIC2.79□□□□□ -1.96
MBD3L4A6NDZ8 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.79□□□□□ -1.96
MBD3L4A6NDZ8 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.79□□□□□ -1.96
MBD3L4A6NDZ8 AC025750.2-201ENST00000442609 450 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms