Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC78A2IDD5 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC78A2IDD5 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC78A2IDD5 AP003122.5-201ENST00000527668 3766 ntBASIC3.14□□□□□ -1.91
CCDC78A2IDD5 SNORD56.1-201ENST00000362913 68 ntBASIC3.14□□□□□ -1.91
CCDC78A2IDD5 Y_RNA.396-201ENST00000383949 103 ntBASIC3.14□□□□□ -1.91
CCDC78A2IDD5 RNU1-139P-201ENST00000391307 165 ntBASIC3.14□□□□□ -1.91
CCDC78A2IDD5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC78A2IDD5 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC78A2IDD5 RNU5F-8P-201ENST00000515941 111 ntBASIC3.14□□□□□ -1.91
CCDC78A2IDD5 SNORA31.23-201ENST00000517219 133 ntBASIC3.14□□□□□ -1.91
CCDC78A2IDD5 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC78A2IDD5 AC023157.2-201ENST00000540596 141 ntBASIC3.14□□□□□ -1.91
CCDC78A2IDD5 MIR5680-201ENST00000577577 84 ntBASIC3.14□□□□□ -1.91
CCDC78A2IDD5 AC020895.1-201ENST00000595362 272 ntBASIC3.14□□□□□ -1.91
CCDC78A2IDD5 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC78A2IDD5 RNU6-91P-201ENST00000607774 107 ntBASIC3.14□□□□□ -1.91
CCDC78A2IDD5 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC78A2IDD5 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC78A2IDD5 AC099654.7-201ENST00000635788 2127 ntBASIC3.14□□□□□ -1.91
CCDC78A2IDD5 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCDC78A2IDD5 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC78A2IDD5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC78A2IDD5 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC78A2IDD5 RNU6-379P-201ENST00000363813 104 ntBASIC3.13□□□□□ -1.91
CCDC78A2IDD5 Y_RNA.350-201ENST00000365409 98 ntBASIC3.13□□□□□ -1.91
CCDC78A2IDD5 Y_RNA.439-201ENST00000384119 94 ntBASIC3.13□□□□□ -1.91
CCDC78A2IDD5 Y_RNA.458-201ENST00000384240 102 ntBASIC3.13□□□□□ -1.91
CCDC78A2IDD5 Y_RNA.478-201ENST00000384358 107 ntBASIC3.13□□□□□ -1.91
CCDC78A2IDD5 SNORA48.5-201ENST00000391143 135 ntBASIC3.13□□□□□ -1.91
CCDC78A2IDD5 RPL23AP58-201ENST00000440453 469 ntBASIC3.13□□□□□ -1.91
CCDC78A2IDD5 SNORD127-201ENST00000458892 86 ntBASIC3.13□□□□□ -1.91
CCDC78A2IDD5 RNU6-1132P-201ENST00000459214 107 ntBASIC3.13□□□□□ -1.91
CCDC78A2IDD5 AC109925.1-201ENST00000478069 331 ntBASIC3.13□□□□□ -1.91
CCDC78A2IDD5 RPL30P1-201ENST00000488676 339 ntBASIC3.13□□□□□ -1.91
CCDC78A2IDD5 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC78A2IDD5 AC115990.1-201ENST00000526957 301 ntBASIC3.13□□□□□ -1.91
CCDC78A2IDD5 AC006199.1-201ENST00000548728 219 ntBASIC3.13□□□□□ -1.91
CCDC78A2IDD5 AC021231.3-201ENST00000558497 370 ntBASIC3.13□□□□□ -1.91
CCDC78A2IDD5 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC78A2IDD5 AC010928.2-201ENST00000588017 287 ntBASIC3.13□□□□□ -1.91
CCDC78A2IDD5 AC078899.3-201ENST00000599065 212 ntBASIC3.13□□□□□ -1.91
CCDC78A2IDD5 AL138963.2-201ENST00000605137 226 ntBASIC3.13□□□□□ -1.91
CCDC78A2IDD5 Y_RNA.772-201ENST00000606692 102 ntBASIC3.13□□□□□ -1.91
CCDC78A2IDD5 AC090425.1-201ENST00000610007 140 ntBASIC3.13□□□□□ -1.91
CCDC78A2IDD5 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CCDC78A2IDD5 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC78A2IDD5 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC78A2IDD5 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC78A2IDD5 AC004944.1-201ENST00000517807 3059 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC78A2IDD5 RNU6-858P-201ENST00000362436 107 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 RNA5SP374-201ENST00000362939 125 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 RNU5B-2P-201ENST00000363036 113 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 Y_RNA.111-201ENST00000363248 100 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 RNU5F-3P-201ENST00000363767 117 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 Y_RNA.307-201ENST00000365022 117 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 Y_RNA.376-201ENST00000365638 108 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 SNORA29-201ENST00000384183 140 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 Y_RNA.552-201ENST00000384665 112 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 Y_RNA.562-201ENST00000384695 113 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 SNORA26.3-201ENST00000391119 136 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 MRPL35P1-201ENST00000404272 572 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 AL031121.1-201ENST00000406553 254 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 MIR1289-1-201ENST00000408836 144 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC78A2IDD5 AC104332.2-201ENST00000429959 156 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC78A2IDD5 AC009969.1-201ENST00000438726 172 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 SNORA59A-201ENST00000459326 152 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 RN7SL75P-201ENST00000461926 281 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 AP001486.1-201ENST00000463339 476 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 RPS23P5-201ENST00000495419 428 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC78A2IDD5 SNORA31.6-201ENST00000516241 130 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 AP003733.2-201ENST00000529409 171 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 AC097372.5-201ENST00000623665 376 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC78A2IDD5 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC78A2IDD5 AC093831.2-201ENST00000624393 3427 ntBASIC3.12□□□□□ -1.91
CCDC78A2IDD5 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC78A2IDD5 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC78A2IDD5 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC78A2IDD5 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC78A2IDD5 AC010615.1-201ENST00000594254 1764 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC78A2IDD5 RNU6-1159P-201ENST00000362933 107 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 SNORD115-8-201ENST00000363856 82 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 Y_RNA.222-201ENST00000364264 102 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 Y_RNA.257-201ENST00000364596 102 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 SNORD115-38-201ENST00000365037 82 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 SNORD21-201ENST00000383953 95 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 RNU6-26P-201ENST00000383985 107 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 Y_RNA.447-201ENST00000384184 113 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 Y_RNA.512-201ENST00000384518 102 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 RNU6-748P-201ENST00000384648 107 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 MIR634-201ENST00000385208 97 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 SNORD78.2-201ENST00000391076 69 ntBASIC3.11□□□□□ -1.91
CCDC78A2IDD5 RNU4-47P-201ENST00000410876 114 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms