Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RNU6-418P-201ENST00000384035 107 ntBASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 RNU6-190P-201ENST00000384154 102 ntBASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 ISCA1P6-201ENST00000427740 390 ntBASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 snoU13.25-201ENST00000458945 104 ntBASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AL049829.1-201ENST00000465411 156 ntBASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AP000797.1-201ENST00000478870 387 ntBASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 HMGB1P29-201ENST00000505659 499 ntBASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AK3P2-201ENST00000507976 429 ntBASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AC087854.1-201ENST00000519706 414 ntBASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 DEFB130C-202ENST00000530001 230 ntBASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AC008752.3-201ENST00000588113 712 ntBASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 RAC1P9-201ENST00000604990 392 ntBASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AC100812.1-201ENST00000607622 580 ntBASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AC097372.5-201ENST00000623665 376 ntBASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 BX322639.1-202ENST00000423987 2213 ntBASIC0.02□□□□□ -2.41
TCRBV3S1A0A5B6 RNU6-511P-201ENST00000363496 107 ntBASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 RNU5E-6P-201ENST00000365574 115 ntBASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 RNU6-163P-201ENST00000384396 106 ntBASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 MIR578-201ENST00000384828 96 ntBASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 NFU1P2-201ENST00000448700 469 ntBASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 RPS20P10-201ENST00000451209 253 ntBASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 AL163973.1-201ENST00000484753 577 ntBASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 RNU1-86P-201ENST00000516108 154 ntBASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 RNU1-107P-201ENST00000516617 154 ntBASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 VN1R87P-201ENST00000596706 487 ntBASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 PCGEM1.1-201ENST00000613431 131 ntBASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 U6.42-201ENST00000618440 107 ntBASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 Z69720.2-201ENST00000624755 279 ntBASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 AC103706.2-201ENST00000638080 240 ntBASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 AC092104.1-201ENST00000497346 1441 ntBASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
TCRBV3S1A0A5B6 AC092268.1-201ENST00000342691 405 ntBASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 MIR103A1-201ENST00000362165 78 ntBASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 RNU4-48P-201ENST00000365559 182 ntBASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 RNU6-342P-201ENST00000384521 104 ntBASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 AL603865.2-201ENST00000401679 213 ntBASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 VPS26BP1-201ENST00000417155 755 ntBASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 MRPS18CP6-201ENST00000423587 223 ntBASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 AC002486.1-201ENST00000435098 391 ntBASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 SRRM1P2-201ENST00000464531 1192 ntBASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 RNU5F-4P-201ENST00000516581 114 ntBASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 AC027419.1-201ENST00000522976 328 ntBASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 AC087883.1-201ENST00000551882 391 ntBASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 DEFB131E-202ENST00000602581 683 ntBASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 AL606834.3-201ENST00000602615 496 ntBASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 AC099785.1-201ENST00000605697 437 ntBASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 AC006927.4-201ENST00000639187 543 ntBASIC0□□□□□ -2.41
TCRBV3S1A0A5B6 RNU4-45P-201ENST00000365469 141 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 SNORA36.2-201ENST00000384004 127 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 RNU6-45P-201ENST00000384471 107 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 MIR23A-201ENST00000385245 73 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 MIR1284-201ENST00000408337 120 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 MIR320C1-201ENST00000408566 88 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 RN7SKP266-201ENST00000410232 287 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 TIMM9P3-201ENST00000428659 274 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 RPL23AP50-201ENST00000434149 455 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 HMGN2P34-201ENST00000437647 269 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 TAF9P1-201ENST00000445421 515 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 AL133217.1-201ENST00000450980 425 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 TAF9P2-201ENST00000454958 515 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 AC109445.1-201ENST00000512356 383 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 SNORA70.12-201ENST00000516084 153 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 AC106038.2-201ENST00000520706 568 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 MTND2P7-201ENST00000521337 640 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 AC007834.2-201ENST00000536310 343 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 AC090049.2-201ENST00000550377 109 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 AC011195.1-201ENST00000578177 177 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 MIR4769-201ENST00000584126 77 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 MIR151B-201ENST00000584249 96 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 AC026585.1-201ENST00000619582 524 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 7SK.10-201ENST00000621414 298 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 AC093875.1-201ENST00000623688 504 ntBASIC-0.01□□□□□ -2.41
TCRBV3S1A0A5B6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms