Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC004486.1-201ENST00000546846 233 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 AC004584.2-201ENST00000570407 410 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 AL356575.1-201ENST00000603008 283 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 Z98751.3-201ENST00000604447 521 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 AC100812.1-201ENST00000607622 580 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 AC005520.5-201ENST00000613926 164 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.63□□□□□ -1.99
TCRBV7S3A2A0A539 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 U3.13-201ENST00000364804 214 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 SNORA22B-201ENST00000383876 138 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 Y_RNA.405-201ENST00000383979 100 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 Y_RNA.451-201ENST00000384200 100 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 RNU6-17P-201ENST00000384245 107 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 RNY1P14-201ENST00000384426 108 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 RNU6-18P-201ENST00000384527 107 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 Y_RNA.524-201ENST00000384564 100 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 Y_RNA.561-201ENST00000384694 100 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 SNORA48.2-201ENST00000390926 124 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 AL590004.1-201ENST00000405321 300 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 U6atac.2-201ENST00000408644 118 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 AC007098.1-201ENST00000420122 367 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 MTND4P19-201ENST00000446659 478 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 RPL23AP70-201ENST00000483361 460 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 AC006483.1-201ENST00000487308 313 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 SRIP1-201ENST00000489235 288 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 AC021146.2-201ENST00000504736 556 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 RNU7-4P-201ENST00000516961 62 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 RN7SKP295-201ENST00000517264 153 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 AC027176.1-201ENST00000560204 514 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 CYP4A27P-201ENST00000567218 190 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 AC022432.1-201ENST00000595739 310 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 AL034555.1-201ENST00000604816 211 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 AL137790.1-201ENST00000634283 177 ntBASIC2.62□□□□□ -1.99
TCRBV7S3A2A0A539 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 U8.9-201ENST00000365667 134 ntBASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 RNU6-1032P-201ENST00000384100 107 ntBASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 MIR625-201ENST00000385047 85 ntBASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 RNU6-308P-201ENST00000390957 107 ntBASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 MIR190B-201ENST00000401119 79 ntBASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 MCFD2P1-201ENST00000417812 300 ntBASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 MTCO3P29-201ENST00000432119 779 ntBASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 OR2AQ1P-201ENST00000451972 200 ntBASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 RPS3P1-201ENST00000456781 192 ntBASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 RNA5SP367-201ENST00000516557 118 ntBASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 SCARNA3-201ENST00000517097 143 ntBASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 RNU6-988P-201ENST00000519081 107 ntBASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 AC007336.1-201ENST00000576365 3828 ntBASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 MIR3670-2-201ENST00000582974 65 ntBASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 MIR3670-1-201ENST00000584160 65 ntBASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 MIR3670-3-201ENST00000584855 65 ntBASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 AL033523.1-201ENST00000605153 153 ntBASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 MIR3670-4-201ENST00000612260 65 ntBASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.61□□□□□ -1.99
TCRBV7S3A2A0A539 AC138915.1-201ENST00000565427 1685 ntBASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 RNU6-137P-201ENST00000363680 108 ntBASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 SNORD115-8-201ENST00000363856 82 ntBASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 RNU4-56P-201ENST00000364700 142 ntBASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 SNORD115-38-201ENST00000365037 82 ntBASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 SNORA33.2-201ENST00000365413 134 ntBASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 U8.10-201ENST00000384260 133 ntBASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 MIR9-1-201ENST00000385198 89 ntBASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 RPL30P4-201ENST00000429309 333 ntBASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 AC105272.1-201ENST00000438604 198 ntBASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 AC080013.2-201ENST00000460866 323 ntBASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 AC105758.1-201ENST00000506038 399 ntBASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 SNORA25.11-201ENST00000515935 105 ntBASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 Y_RNA.661-201ENST00000516003 99 ntBASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 RNU6-826P-201ENST00000516827 104 ntBASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 MIR3923-201ENST00000579521 83 ntBASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 AC087588.2-201ENST00000617667 426 ntBASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.6□□□□□ -1.99
TCRBV7S3A2A0A539 RNU6-874P-201ENST00000362390 105 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 RNU4-15P-201ENST00000362613 141 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 RNU1-72P-201ENST00000362976 153 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 Y_RNA.148-201ENST00000363557 117 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 Y_RNA.216-201ENST00000364205 93 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 AC117470.1-201ENST00000381974 330 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 DEFA7P-201ENST00000382676 285 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 Y_RNA.422-201ENST00000384054 114 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 MIR153-2-201ENST00000385225 87 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms