Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AL450472.1-202ENST00000637286 180 ntBASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SMIM28A0A1B0GU29 Y_RNA.3-201ENST00000362331 103 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 RNU4-15P-201ENST00000362613 141 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 Y_RNA.38-201ENST00000362617 102 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 RNU6-623P-201ENST00000363143 105 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 SNORA36A-201ENST00000384221 132 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 U8.10-201ENST00000384260 133 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 MIR561-201ENST00000385216 97 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 RNU6-1245P-201ENST00000411130 106 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 USP9YP18-201ENST00000425912 695 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 RPL23AP95-201ENST00000426806 265 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 MRPS10P2-201ENST00000431226 381 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 AC107032.1-201ENST00000485945 480 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 HMGB1P35-201ENST00000503360 598 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 SNORA19.2-201ENST00000516013 114 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 RNU6-720P-201ENST00000516363 108 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 AC104576.1-201ENST00000524225 88 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 NDUFA5P6-201ENST00000542110 379 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 AC018630.3-201ENST00000542637 96 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 EIF1P4-201ENST00000572664 335 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 AC024614.2-201ENST00000577584 372 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 AC010525.2-201ENST00000590920 195 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 VN1R107P-201ENST00000601784 209 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 AP001836.1-201ENST00000604675 523 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 RNU6-89P-201ENST00000606519 100 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 AL162373.1-201ENST00000620433 407 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 OR4G1P-203ENST00000641984 1631 ntBASIC1.75□□□□□ -2.13
SMIM28A0A1B0GU29 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 AC008555.8-201ENST00000623602 2168 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 RNU6-661P-201ENST00000362409 107 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 RNU6-1141P-201ENST00000364520 107 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 Y_RNA.516-201ENST00000384541 124 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 Y_RNA.554-201ENST00000384672 102 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 SNORA46.1-201ENST00000391069 153 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 Y_RNA.597-201ENST00000410463 100 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 IFNA20P-201ENST00000436840 528 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 SEPT14P3-201ENST00000439401 183 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 AL732372.2-207ENST00000445840 183 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 SEPT14P2-201ENST00000453405 183 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 AC083904.1-201ENST00000487828 231 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 SEPT14P4-201ENST00000513445 186 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 RNU6-314P-201ENST00000516574 104 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 RNU6-323P-201ENST00000521915 107 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 FO082796.1-201ENST00000523795 183 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 TPRKBP2-201ENST00000565969 475 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 MIR4287-201ENST00000579398 78 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 MIR3941-201ENST00000582572 103 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 AL031274.2-201ENST00000599419 203 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 AL162413.1-201ENST00000603198 110 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 AL078605.1-201ENST00000603529 500 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 AC018889.1-201ENST00000605372 397 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 CTHRC1P1-201ENST00000605383 469 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 AC064807.4-201ENST00000607201 407 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 AL357078.3-201ENST00000607528 618 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 AC104458.1-201ENST00000608243 463 ntBASIC1.74□□□□□ -2.13
SMIM28A0A1B0GU29 Y_RNA.256-201ENST00000364594 104 ntBASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 MIR29B2-201ENST00000385055 81 ntBASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 SNORA26.3-201ENST00000391119 136 ntBASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 HMGN2P39-201ENST00000398005 273 ntBASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 AL590002.1-201ENST00000406554 418 ntBASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 MIR1262-201ENST00000408276 93 ntBASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 RNU4-62P-201ENST00000410125 130 ntBASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 HMGN2P26-201ENST00000463169 339 ntBASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 AC079140.5-201ENST00000507882 310 ntBASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 RNA5SP137-201ENST00000516833 135 ntBASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 SNORD60.2-201ENST00000516883 86 ntBASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 HSPE1P4-201ENST00000550617 308 ntBASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 ANP32BP3-201ENST00000559213 706 ntBASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 MIR4448-201ENST00000584360 86 ntBASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 AC078795.3-201ENST00000602913 472 ntBASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 RMST_3.1-201ENST00000611651 109 ntBASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 FER-210ENST00000628534 558 ntTSL 5 BASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 AL359851.1-201ENST00000569460 4997 ntBASIC1.73□□□□□ -2.13
SMIM28A0A1B0GU29 RNY3P3-201ENST00000363816 102 ntBASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 RNU6-546P-201ENST00000383991 107 ntBASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 AL512604.1-201ENST00000404812 257 ntBASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 RN7SKP61-201ENST00000410642 295 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms