Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 RNU6-238P-201ENST00000363313 106 ntBASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 Y_RNA.152-201ENST00000363578 100 ntBASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 RNU6-137P-201ENST00000363680 108 ntBASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 SNORA63.7-201ENST00000365579 123 ntBASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 RNU6-281P-201ENST00000384212 103 ntBASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 RNU6-318P-201ENST00000384283 103 ntBASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 RNU6-1001P-201ENST00000411265 100 ntBASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 RPL23AP58-201ENST00000440453 469 ntBASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 RPEP5-201ENST00000441137 268 ntBASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 RPS12P18-201ENST00000442381 270 ntBASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC103975.1-201ENST00000482506 483 ntBASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 RNA5SP54-201ENST00000516951 92 ntBASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC034114.1-201ENST00000520293 285 ntBASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 IGHV3-76-201ENST00000522465 295 ntBASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 HSPE1P20-201ENST00000538133 289 ntBASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC093023.1-201ENST00000547375 507 ntBASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC027176.1-201ENST00000560204 514 ntBASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 MIR5680-201ENST00000577577 84 ntBASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC010620.2-201ENST00000600135 313 ntBASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 uc_338.1-201ENST00000612113 180 ntBASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC069528.2-201ENST00000624849 1991 ntBASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
IGHV4-28A0A0C4DH34 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC026241.1-201ENST00000517873 2142 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 MIR30E-201ENST00000362104 92 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 Y_RNA.47-201ENST00000362697 108 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 RNU1-72P-201ENST00000362976 153 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 Y_RNA.149-201ENST00000363558 117 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 RNU6-926P-201ENST00000384075 107 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 RNU6-574P-201ENST00000384265 107 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 Y_RNA.512-201ENST00000384518 102 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 MIR568-201ENST00000385036 95 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 SNORA12-201ENST00000391162 147 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 AL357075.1-201ENST00000404107 726 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 MTCYBP9-201ENST00000431021 303 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 RPS4XP2-201ENST00000458402 793 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC007215.1-201ENST00000464893 276 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 MTCO2P24-201ENST00000515611 426 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 SNORA25.14-201ENST00000516481 132 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 SCARNA3-201ENST00000517097 143 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 HSPE1P18-201ENST00000517602 280 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 EIF4A1P12-201ENST00000551910 141 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 MIR3651-201ENST00000630427 90 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC080128.1-201ENST00000474389 1917 ntBASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.36□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC093010.3-201ENST00000570269 15214 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 AL079305.1-201ENST00000623159 3008 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC010329.5-201ENST00000623497 2174 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 RNU1-70P-201ENST00000362618 164 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 Y_RNA.176-201ENST00000363815 109 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 U3.9-201ENST00000363823 204 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 RNU6-280P-201ENST00000364145 104 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 RNU6-805P-201ENST00000365643 106 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 Y_RNA.458-201ENST00000384240 102 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 Y_RNA.574-201ENST00000384766 95 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 MIR483-201ENST00000385070 76 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 SNORD78.2-201ENST00000391076 69 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 RNU6-1109P-201ENST00000391187 107 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 RNU6-130P-201ENST00000411112 103 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 SDAD1P3-201ENST00000427380 333 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 MICF-203ENST00000432679 129 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 BX679664.1-201ENST00000434429 253 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC112220.1-201ENST00000434628 355 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 AC073910.1-201ENST00000445047 438 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 Z75741.1-201ENST00000446793 314 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 RNU7-170P-201ENST00000459303 61 ntBASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.35□□□□□ -2.03
IGHV4-28A0A0C4DH34 RN7SL504P-201ENST00000494496 287 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms