Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 RNU7-138P-201ENST00000459479 64 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 AC008628.2-201ENST00000502605 298 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 SNORA4.4-201ENST00000515921 135 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 SNORA19.2-201ENST00000516013 114 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 AP005902.1-201ENST00000521358 186 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 TRAV32-201ENST00000553993 340 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 MIR4419B-201ENST00000577260 68 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 MIR3683-201ENST00000580847 82 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 MIR3616-201ENST00000584070 92 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 AL355297.2-201ENST00000604792 129 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 SNORA43.4-201ENST00000629559 138 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 MTND4P23-201ENST00000447723 1363 ntBASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.41□□□□□ -2.18
TRAV40A0A0B4J280 RNU4-15P-201ENST00000362613 141 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 RNU6-82P-201ENST00000363970 107 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 RNU6-1317P-201ENST00000364582 104 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 SNORA16B-201ENST00000364674 135 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 Y_RNA.295-201ENST00000364918 102 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 RNU6-1329P-201ENST00000365664 107 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 MIR95-201ENST00000385072 81 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 AC108667.1-201ENST00000428618 249 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 MTND3P9-201ENST00000429526 346 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 UBE2V1P8-201ENST00000437166 265 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 RN7SKP210-201ENST00000459176 261 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 snoU13.14-201ENST00000459372 104 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 RPS29P27-201ENST00000463711 170 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 RPL30P1-201ENST00000488676 339 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 COPS8P3-201ENST00000526024 482 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 CYCSP27-201ENST00000527643 293 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 AC109635.3-201ENST00000529536 185 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 GNAI2P1-201ENST00000541815 315 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 IMMP1LP2-201ENST00000552954 492 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 PSMA3P-201ENST00000555485 635 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 ZNF519P2-201ENST00000557032 169 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 MIR3122-201ENST00000577243 73 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 MIR3618-201ENST00000580330 88 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 MIR3942-201ENST00000585264 109 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 AC091135.1-201ENST00000585943 307 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 AP000907.4-201ENST00000604143 237 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 AC096772.1-201ENST00000609146 564 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 DISC2.1-201ENST00000612827 205 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 HAUS6P2-201ENST00000433254 2404 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 AC027514.1-201ENST00000588561 1603 ntBASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TRAV40A0A0B4J280 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 RNU6-1210P-201ENST00000363775 107 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 RNU6-457P-201ENST00000363999 107 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 RNU6-743P-201ENST00000364151 106 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 Y_RNA.338-201ENST00000365320 114 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 MIR524-201ENST00000385242 87 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 MIR549A-201ENST00000385268 96 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 SNORA17.3-201ENST00000391159 129 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 MIR450B-201ENST00000401182 78 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 USP9YP28-201ENST00000435142 589 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 RNU7-187P-201ENST00000458985 68 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 AC005741.1-201ENST00000511094 432 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 RNU7-193P-201ENST00000516723 65 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 RNU6-273P-201ENST00000516937 96 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 RNU6-586P-201ENST00000517265 104 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 AP000763.2-201ENST00000540641 163 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 MIR3672-201ENST00000584290 82 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 AP001836.1-201ENST00000604675 523 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 AC007014.2-201ENST00000615581 479 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 MIR5739-201ENST00000619803 80 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 MIR1248-201ENST00000629190 106 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 MIR3662-201ENST00000637030 95 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 AC100810.6-201ENST00000638068 285 ntBASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV40A0A0B4J280 Y_RNA.9-201ENST00000362354 101 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 SNORA25B-201ENST00000365507 128 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 RNU6-1222P-201ENST00000384615 107 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 MIR487A-201ENST00000385009 80 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 RNU6-192P-201ENST00000391253 100 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 CBX3P9-201ENST00000402326 552 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 Y_RNA.597-201ENST00000410463 100 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 Y_RNA.619-201ENST00000410951 90 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 RNU6-325P-201ENST00000411132 105 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 AL356379.1-201ENST00000414105 126 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms