Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 RNA5SP97-201ENST00000365006 84 ntBASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 Y_RNA.415-201ENST00000384012 112 ntBASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 RNU6-213P-201ENST00000384051 104 ntBASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 Y_RNA.478-201ENST00000384358 107 ntBASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 MIR670-201ENST00000390142 98 ntBASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 Y_RNA.597-201ENST00000410463 100 ntBASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 SNORA57.3-201ENST00000411095 141 ntBASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 AC017079.2-201ENST00000416102 485 ntBASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 AL133547.1-201ENST00000448546 220 ntBASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 RN7SL271P-201ENST00000487601 295 ntBASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 SNORA51-201ENST00000606420 132 ntBASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 MIR6075-201ENST00000620782 95 ntBASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 AC078938.1-201ENST00000620993 318 ntBASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 RNU1-72P-201ENST00000362976 153 ntBASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 SNORD32B-201ENST00000364460 84 ntBASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 Y_RNA.257-201ENST00000364596 102 ntBASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 Y_RNA.552-201ENST00000384665 112 ntBASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 RNU7-143P-201ENST00000516781 65 ntBASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 RNU1-117P-201ENST00000517041 158 ntBASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 AL713866.2-201ENST00000603579 219 ntBASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 AC127459.3-201ENST00000624328 466 ntBASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 AL049781.1-201ENST00000623195 3585 ntBASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
TRAV20A0A0B4J274 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 RNU1-75P-201ENST00000347264 129 ntBASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 SNORD21-201ENST00000383953 95 ntBASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 Y_RNA.416-201ENST00000384014 113 ntBASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 RNU6-907P-201ENST00000390924 102 ntBASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 SNORA53-201ENST00000391141 249 ntBASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 SNORA48.8-201ENST00000391324 134 ntBASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 MIR1251-201ENST00000408552 70 ntBASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 U6atac.2-201ENST00000408644 118 ntBASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 RNU6-107P-201ENST00000516643 102 ntBASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 AC055872.1-201ENST00000570978 278 ntBASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 AC105245.1-201ENST00000581934 244 ntBASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 RPL17P51-201ENST00000605218 238 ntBASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 AC006001.4-201ENST00000622243 395 ntBASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 AC068205.3-201ENST00000636385 468 ntBASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 AC110774.1-201ENST00000623567 2018 ntBASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
TRAV20A0A0B4J274 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 SNORD27-201ENST00000363981 72 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 SNORD87-201ENST00000364849 89 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 Y_RNA.331-201ENST00000365267 102 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 Y_RNA.352-201ENST00000365439 102 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 RNU6-1310P-201ENST00000384153 107 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 RNU6-1274P-201ENST00000384557 107 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 U8.12-201ENST00000384701 133 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 MIR449B-201ENST00000384995 97 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 AC126124.2-201ENST00000413542 321 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 RPL23AP36-201ENST00000413895 458 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 YME1L1P1-201ENST00000429435 297 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 AC092185.1-201ENST00000491371 97 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 RN7SL323P-201ENST00000494712 295 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 HMGB3P17-201ENST00000504195 649 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 SERF1AP1-201ENST00000514575 187 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 RNU6-586P-201ENST00000517265 104 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 MIR4444-1-201ENST00000581696 74 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 MIR4444-2-201ENST00000584390 74 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 AC010900.2-201ENST00000604508 210 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms