Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 RNU7-14P-201ENST00000459331 62 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 MTCO2P29-201ENST00000465212 189 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 RBBP4P6-201ENST00000508098 202 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6-322P-201ENST00000516010 103 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 ACA64.5-201ENST00000516207 127 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6-1223P-201ENST00000517124 104 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 MIR3923-201ENST00000579521 83 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 BNIP3P16-201ENST00000589779 534 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 BNIP3P40-201ENST00000596017 556 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 AL356157.2-201ENST00000605122 111 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 AL158042.1-201ENST00000605338 460 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 AC097478.2-201ENST00000610572 514 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 MIR6788-201ENST00000618842 66 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 AP000484.1-201ENST00000620067 1252 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 AC136475.10-201ENST00000620253 385 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 Y_RNA.118-201ENST00000363300 101 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 U3.9-201ENST00000363823 204 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 RNU1-93P-201ENST00000364704 169 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 SNORD32A-201ENST00000364805 84 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 RNU6-534P-201ENST00000364877 106 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 SNORA4.2-201ENST00000365313 147 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 RNU6-61P-201ENST00000365528 109 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 MIR558-201ENST00000384920 94 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 RNU6-1245P-201ENST00000411130 106 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 AL590135.1-201ENST00000422215 156 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 AC010099.3-201ENST00000423896 409 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 AC019205.3-201ENST00000424573 156 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 AC137499.1-201ENST00000427602 88 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 GTF2IP13-201ENST00000438487 386 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 AC016700.2-201ENST00000446011 156 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 AC013470.1-201ENST00000453438 462 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 RPS29P1-201ENST00000465274 159 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 AC015911.1-201ENST00000495111 156 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 AC067942.3-201ENST00000512025 362 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 RNU6-1041P-201ENST00000516254 102 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 Y_RNA.673-201ENST00000516306 88 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 RNA5SP384-201ENST00000516615 116 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 RN7SKP49-201ENST00000516675 260 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 SNORA70.22-201ENST00000517160 124 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 CBX3P8-201ENST00000532412 525 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 EIF4A1P12-201ENST00000551910 141 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 ZNF519P3-201ENST00000557158 1032 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 HMGN1P30-201ENST00000589286 268 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 MTCO2P2-201ENST00000591258 225 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 AC105129.3-201ENST00000605455 485 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 AC108706.1-201ENST00000611053 297 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 AC126177.8-201ENST00000618339 1015 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 MTND4P14-201ENST00000435799 1354 ntBASIC0.52□□□□□ -2.33
TRAV1-1A0A0B4J248 RNU4-68P-201ENST00000364314 141 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 Y_RNA.302-201ENST00000364997 102 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 RNU6-17P-201ENST00000384245 107 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 RNY1P14-201ENST00000384426 108 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 RNU6-692P-201ENST00000384496 107 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 RNU6-18P-201ENST00000384527 107 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 MIR520E-201ENST00000384867 87 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 RNU6-293P-201ENST00000411259 106 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 HMGN1P14-201ENST00000412459 517 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 COX6CP10-201ENST00000416832 224 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 RAB28P5-201ENST00000427490 651 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 MED13P1-201ENST00000428342 171 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 AL133396.1-201ENST00000432048 687 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 AC000111.3-201ENST00000433478 193 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 RPL37P21-201ENST00000435890 276 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 MTND1P18-201ENST00000448191 573 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 RPL39P38-201ENST00000467018 153 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 RPS26P45-201ENST00000471748 340 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 TRBVA-201ENST00000498804 316 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 HSPE1P23-201ENST00000509838 286 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 AC011406.1-201ENST00000512440 370 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 AC074344.1-201ENST00000512823 224 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 RN7SKP265-201ENST00000516448 223 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 ZNF321P-202ENST00000550843 495 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 MIR4709-201ENST00000577272 72 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 SNORA59B-202ENST00000578183 701 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 AC016727.2-201ENST00000603988 621 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 AC064872.1-201ENST00000604823 1072 ntBASIC0.51□□□□□ -2.33
TRAV1-1A0A0B4J248 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms